prot_H-elongata_contig132582.2328.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig132582.2328.1
Unique Nameprot_H-elongata_contig132582.2328.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.020e-36
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFPVDD 89
            MP+LDNFAH GGM+MG FMGL +LVQKREDDRG  +  K YQ  L+LV+AV VP L I GLS+LYGRSDP+EWCGWCE+ISCVEFP  D
Sbjct:  586 MPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLNKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGD 674          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.430e-36
Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKM--LRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFPVDD 89
            MPYLDNFAH GGM+MG FMGL +LVQKREDDRG  ++ K YQ    L+LV+AV VP L I GLS+LYGRSDP+EWCGWCE+ISCVEFP  D
Sbjct:  584 MPYLDNFAHCGGMLMGLFMGLGLLVQKREDDRGYRLDKKCYQARVSLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGD 674          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A7S2RTG0_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTG0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 6.470e-21
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    2 PYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFP 86
            PY+DNFAHIGG++ G   G  VLV  R    G   E K YQ +L+++SAV++P+L +  L +LY   +P EWC WC  +SCV+FP
Sbjct:  100 PYVDNFAHIGGLLTGMIAGFGVLVANRYSRYGELKERKRYQLVLQIMSAVLIPVLIVVCLFVLY-LGEPGEWCSWCHYMSCVQFP 183          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A835YQV6_9STRA (Rhomboid-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV6_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.530e-19
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPS--EWCGWCESISCVEFPVDD 89
            MPYLDNFAH+GG++MGFF  L +LV + E   G  V     Q++L+ +  V    L +  L +L+G  + S  EWC WC ++SCVEFP  D
Sbjct:  156 MPYLDNFAHMGGLVMGFFCSLPLLVMRAETAHGKLVAVSVRQRILQALGLVTSIALLVAALVVLFGSEEDSVNEWCSWCSNLSCVEFPKGD 246          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A251UCK3_HELAN (RHOMBOID-like protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCK3_HELAN)

HSP 1 Score: 77.0 bits (188), Expect = 1.170e-14
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKRED--------DRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFPV 87
            +P++DNFAHIGG I GFF+G ++L + + D           M  + K YQ +L ++S + + ++F TG   LY + D + +C WC  +SCV  P+
Sbjct:  223 LPHVDNFAHIGGFITGFFLGFILLARPQLDWIVPPGYYGHPMKPQYKLYQYVLIVLSVIALIVIFTTGFVFLYRKIDGNNYCSWCHYLSCVPTPL 317          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: UPI001652FC76 (RHOMBOID-like protein 1 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652FC76)

HSP 1 Score: 77.0 bits (188), Expect = 1.620e-14
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKRED--------DRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFPV 87
            +P++DNFAHIGG I GFF+G ++L + + D           M  + K YQ +L ++S + + ++F TG   LY + D + +C WC  +SCV  P+
Sbjct:  376 LPHVDNFAHIGGFITGFFLGFILLARPQLDWIVPPGYYGHPMKPQYKLYQYVLIVLSVIALIVIFTTGFVFLYRKIDGNNYCSWCHYLSCVPTPL 470          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A7S3UQB1_HETAK (Rhomboid-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQB1_HETAK)

HSP 1 Score: 75.5 bits (184), Expect = 5.450e-14
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFP 86
            MPYLDNFAH GGM+ G   GL++L Q R D  G     K YQ  L  ++A+    L +   + LY  +D    C  C  +SCVEFP
Sbjct:  338 MPYLDNFAHTGGMVFGVLCGLVLLAQTRVDHFGFARGRKCYQTALATLAAMGTAALLMAATAWLYSSADVYAICPRCSKLSCVEFP 423          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A8B7BSV3_PHODC (RHOMBOID-like protein n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BSV3_PHODC)

HSP 1 Score: 72.0 bits (175), Expect = 7.980e-13
Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQ-------KREDDRGMHVET-----KSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCV 83
            +P++DNFAHIGG I GFF+G ++L++       ++    G H  +     K+YQ +L ++SA+ + + FI GL +L+   + ++ C WC  +SCV
Sbjct:  235 LPHVDNFAHIGGFITGFFLGFVILIRPQFGYISQKNAPLGYHSRSIKRKHKTYQYVLWIISAIALVVGFIVGLVLLFRGVNANDHCSWCHYLSCV 329          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: UPI001C4DD5B8 (RHOMBOID-like protein 2 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4DD5B8)

HSP 1 Score: 70.9 bits (172), Expect = 1.700e-12
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQ-------KREDDRGMHVETK--SYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCV 83
            +P++DNFAHIGG ++GFF+G ++L+Q       +    R   V++K  +YQ +L +VS +++ + FI GL ML+   + ++ C WC  +SCV
Sbjct:  234 LPHVDNFAHIGGFLVGFFLGFILLLQPQFGWVARHNLPREGRVKSKYLAYQYILGIVSLILLVVGFIVGLIMLFRGVNGNDHCHWCHYLSCV 325          
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Match: A0A6P5EUE5_ANACO (RHOMBOID-like protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EUE5_ANACO)

HSP 1 Score: 70.9 bits (172), Expect = 2.070e-12
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:    1 MPYLDNFAHIGGMIMGFFMGLLVLVQ-------KREDDRGMHVET-----KSYQKMLRLVSAVMVPLLFITGLSMLYGRSDPSEWCGWCESISCV 83
            +P++DNFAHIGG I GFF+G ++L++       ++    G H        K YQ +L +++A+++ + FI GL ML+   + +E C WC  +SCV
Sbjct:  234 LPHVDNFAHIGGFITGFFLGFVILIRPQFKWISQKSAPLGYHSSPVKHKHKMYQYVLWVIAAIVLIVGFILGLVMLFRGVNMNEHCSWCHYLSCV 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132582.2328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIB7_ECTSI1.020e-3671.91Rhomboid-like protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JTL7_9PHAE2.430e-3671.43Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S2RTG0_9STRA6.470e-2148.24Rhomboid-like protein (Fragment) n=1 Tax=labyrinth... [more]
A0A835YQV6_9STRA2.530e-1945.05Rhomboid-like protein n=1 Tax=Tribonema minus TaxI... [more]
A0A251UCK3_HELAN1.170e-1436.84RHOMBOID-like protein n=1 Tax=Helianthus annuus Ta... [more]
UPI001652FC761.620e-1436.84RHOMBOID-like protein 1 n=1 Tax=Helianthus annuus ... [more]
A0A7S3UQB1_HETAK5.450e-1443.02Rhomboid-like protein n=1 Tax=Heterosigma akashiwo... [more]
A0A8B7BSV3_PHODC7.980e-1335.79RHOMBOID-like protein n=1 Tax=Phoenix dactylifera ... [more]
UPI001C4DD5B81.700e-1238.04RHOMBOID-like protein 2 n=1 Tax=Zingiber officinal... [more]
A0A6P5EUE5_ANACO2.070e-1236.84RHOMBOID-like protein n=3 Tax=Ananas comosus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002610Peptidase S54, rhomboidPANTHERPTHR22936RHOMBOID-RELATEDcoord: 1..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 2..28
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 6..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig132582contigH-elongata_contig132582:226..1480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig132582.2328.1mRNA_H-elongata_contig132582.2328.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig132582 226..1501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig132582.2328.1 ID=prot_H-elongata_contig132582.2328.1|Name=mRNA_H-elongata_contig132582.2328.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MPYLDNFAHIGGMIMGFFMGLLVLVQKREDDRGMHVETKSYQKMLRLVSA
VMVPLLFITGLSMLYGRSDPSEWCGWCESISCVEFPVDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002610Peptidase_S54_rhomboid