prot_H-elongata_contig13248.2324.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13248.2324.1
Unique Nameprot_H-elongata_contig13248.2324.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length185
Homology
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: D7FHR7_ECTSI (ABC-type spermidine/putrescine transport system, ATPase component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR7_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 4.270e-62
Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 0
Query:    2 LKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKR-GHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSY-RIVMELAKQVVELTKGRVTEVHIY 180
            LKCLAGLE PT G+I  +VSGLR+ VYVGR   S  G++VR  + +EVA HLPGK  G  VE+ TN +LGAL+LHGVS T+DRDLSGGEVYRFA+AMALA+GC SP+PPVLLLD  FD+SD R      VR GVEF LFDLQ+KMGVML+FT+     +V EL +QV E ++G++ EV ++
Sbjct:  122 LKCLAGLEAPTSGEI--TVSGLRKPVYVGRAITSTTGKTVRQLLREEVASHLPGKNNGRQVELTTNTLLGALELHGVSLTKDRDLSGGEVYRFAMAMALARGCGSPTPPVLLLDDMFDRSDKR------VRQGVEFTLFDLQKKMGVMLMFTAPGNDAVVQELGRQVAEFSEGKIEEVTVH 294          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A836CP28_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP28_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.380e-15
Identity = 66/208 (31.73%), Postives = 94/208 (45.19%), Query Frame = 0
Query:    2 LKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDR------------------------------DLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEVHI 179
            LK LAG E P+ G ++  ++G  R VY+ R+ A     +V   V   +AR  P +    V    + +L  ++L   +  +                                DLSGGEV RF LAMALA G + P PPVLL D F D  D R      VR  VE  +  L    GV ++F+SHS   V+EL+   +  + G+V ++ I
Sbjct:  106 LKILAGKESPSSGTVD--ITGDHRMVYLTRHFAHDPRHTVAANVRARIARAAPAQHAEAVAEIADRLLRMVELGAKAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSGGEVLRFGLAMALAAGVAGPEPPVLLCDEFLDHEDQR------VRVRVEGVMRRLLNVHGVGILFSSHSMNTVLELSDAAIVFSNGQVIQMRI 305          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A7C2EDB5_9FIRM (ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2EDB5_9FIRM)

HSP 1 Score: 63.5 bits (153), Expect = 1.360e-8
Identity = 60/191 (31.41%), Postives = 91/191 (47.64%), Query Frame = 0
Query:    2 LKCLAGLERPTLGQIE-------ASVSGL-----RRAV-YVGRNSASLNGRSVRHRVHDEVARHLPGKR--GHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 177
            L+C+AGLE PT G++        A  SG+     RR+V  V +N A     +V     D VA  L  ++     +E     +L  + L G+ R     LSGG+  R ALA AL +      P V+LLD      D +      +R  + F L +LQR+MGV +++ +H     M L+ +V  +  GR+ +V
Sbjct:   46 LRCIAGLEEPTRGEVRIGGRLVSAPASGIFSPPERRSVGMVFQNYAVWPHMTV----FDNVAYPLRLQKLDRRTIEARVREVLEMVALRGLERRFPAQLSGGQQQRVALARALVR-----RPEVMLLDEPLSNLDAK------LREQMRFELKELQRRMGVPILYVTHDQAEAMALSDRVAVMNAGRIVQV 221          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A7C2I774_9FIRM (ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2I774_9FIRM)

HSP 1 Score: 62.0 bits (149), Expect = 5.050e-8
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 0
Query:    2 LKCLAGLERPTLGQIE-------ASVSGL-----RRAV-YVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVA--TNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 177
            L+C+AGLE PT G+I        A  SG+     RRA+  V +N A     +V     D VA  L  +R    EVA    A+L  + L G+ R     LSGG+  R ALA AL +      P +LLLD      D +      +R  + F L +LQR++ V +++ +H     M L+ +V  + +GR+ +V
Sbjct:   49 LRCVAGLEVPTRGEIRLGGRVVSAPASGVFVPPERRAIGMVFQNYAVWPHMTV----FDNVAYPLRLQRLDRREVARRVGAVLEVVALSGLERRYPAQLSGGQQQRVALARALVR-----QPELLLLDEPLSNLDAK------LREQMRFELKELQRRLRVPILYVTHDQAEAMALSDRVAVMREGRIVQV 224          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A0S8JI30_9BACT (ABC transporter domain-containing protein n=3 Tax=candidate division TA06 TaxID=1156500 RepID=A0A0S8JI30_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 9.080e-8
Identity = 57/188 (30.32%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    1 MLKCLAGLERPTLGQI---EASVSGLRRAVYVG---RNSASLNGRSVRH---RVHDEVARHLP-GKRGHD-VEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 177
            +L  +AGLERPT G+I   +  V+  RR V++    RN A +      +    V + +A  L  GK+G   VE     +   L++  + R R  +LSGG+  R A+A A+ +      P V LLD      D R      +R  +   L +LQR++G+  V+ +H     M LA ++  + +GR+ +V
Sbjct:   48 ILNLIAGLERPTTGEIRFDDVIVASGRRKVFLSPKERNVAMVFQSYALYPHLSVFENIAFPLRIGKQGATGVEETVGEVAAMLEISDLLRARPAELSGGQRQRVAIARAIVR-----HPKVFLLDEPLSNLDAR------LRLAMRGELKNLQRRLGITTVYVTHDQVEAMSLADRIAVVRQGRIEQV 224          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: UPI001F2E04D8 (ABC transporter ATP-binding protein n=1 Tax=Alicyclobacillus fructus TaxID=2816082 RepID=UPI001F2E04D8)

HSP 1 Score: 60.1 bits (144), Expect = 1.930e-7
Identity = 59/185 (31.89%), Postives = 91/185 (49.19%), Query Frame = 0
Query:    1 MLKCLAGLERPTLGQIEAS---VSGL----RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKR--GHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTE 176
            +L+ +AGLERPT G+I      V+ L    R    V +N A     +V    +D VA  L  KR    +++     +LG + L   +    R+LSGG+  R ALA ALA     P P VLL D  F   DT+      +R  +   + ++  ++GV  +F +H     +E+A +V+ L +GRV +
Sbjct:   15 ILRLIAGLERPTKGEIWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTV----YDNVAFGLKEKRVPRDEIDRRVRELLGYMRLTEYANRFPRELSGGQQQRVALARALA-----PRPQVLLFDEPFAAIDTQ------IRRELRKFVREVHDELGVTSLFVTHDQEEALEIADRVLVLHEGRVEQ 184          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A7W0X6Y7_9PROT (ABC transporter ATP-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W0X6Y7_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 3.750e-7
Identity = 38/118 (32.20%), Postives = 60/118 (50.85%), Query Frame = 0
Query:   60 DVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 177
            D+E    A L  + L G+   +   LSGG+  R ALA AL        PPVLL D      D +      +R  ++F L +LQR++GV LVF +H     + ++ ++  + KGR+ ++
Sbjct:  112 DIERRVAAALALVALTGLEERKPGQLSGGQQQRVALARALVV-----EPPVLLCDEPLGALDRK------LRQQMQFELKELQRRLGVTLVFVTHDQEEALAMSDRIAVMNKGRIEQI 218          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A843SPW0_9BACT (ATP-binding cassette domain-containing protein n=1 Tax=Luteitalea sp. TaxID=2004800 RepID=A0A843SPW0_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 4.170e-7
Identity = 57/186 (30.65%), Postives = 85/186 (45.70%), Query Frame = 0
Query:    2 LKCLAGLERPTLGQIEAS---VSGL--------RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTE 176
            L+ +AGLERPT G+I      V+G         RR   V ++ A     +V+      VA  + G+R  +V+     +L  + L   S +    LSGGE  R ALA ALA     P P VLL+D  F   D+R      +R  V     D+ R+ G   +  +H     M +A ++  L+ GR+ +
Sbjct:   60 LRLIAGLERPTSGEIVIDGELVAGAGVFVEPERRRVGMVFQDFALFPHLTVK----GNVAFGIRGRRRAEVDETVGRLLADVGLADRSNSYPHMLSGGERQRVALARALA-----PKPQVLLMDEPFSSLDSR------LREQVRHQTIDILRRTGTTAILVTHDPSEAMRIADRIGVLSSGRLAQ 230          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: UPI001F2209FF (ATP-binding cassette domain-containing protein n=1 Tax=Streptomyces muensis TaxID=1077944 RepID=UPI001F2209FF)

HSP 1 Score: 59.3 bits (142), Expect = 5.260e-7
Identity = 60/191 (31.41%), Postives = 83/191 (43.46%), Query Frame = 0
Query:    1 MLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASL-----------NGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGV----SRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTE 176
            +L+CLAGLERPT G++      L   V  GR+   L              + RH V   V R L  + G  +E     +   L L G+    +    R LSGG+  R ALA ALA G     P VLL D      D       +V  G+   +  L+R++G+ +V  +H   +V  L  QV  L  G + E
Sbjct:  602 LLRCLAGLERPTDGEVRLDGEQLAPGVR-GRSRRQLLRVQLVPQDPYGSLNPRHTVASVVGRPLRLRGGMPMEAQPREVERLLSLVGLDPELAGRLPRALSGGQRQRVALARALAAG-----PDVLLCDEVTSALDP------SVAAGITDLIARLRRELGLAVVMVTHDLSVVARLGGQVAVLDGGLIRE 780          
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: UPI00140947DA (ABC transporter ATP-binding protein n=1 Tax=Motilibacter deserti TaxID=2714956 RepID=UPI00140947DA)

HSP 1 Score: 58.5 bits (140), Expect = 5.670e-7
Identity = 57/177 (32.20%), Postives = 79/177 (44.63%), Query Frame = 0
Query:    1 MLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLN-GRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTK--GRV 174
            +L  +AGL+RPT G++  +  G       G     L  GR+V      E+A  L G    D       +L  + L G    R  +LSGG   R ALA ALAQ       PVLL+D  F   D         R  +   L  +  + GV +VF +H+ R  + L ++VV L+   GRV
Sbjct:   65 LLSLIAGLDRPTAGEVAVAGDGAALMPQEGGLFPWLTAGRNV------ELALRLRGVSRSDRRTEAERLLSLVRLDGAYDKRPHELSGGMRQRVALARALAQ-----KRPVLLMDEPFSALDA------ITRDALHGELIRIWEETGVAIVFVTHNVREAVRLGQRVVLLSSRPGRV 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHR7_ECTSI4.270e-6261.33ABC-type spermidine/putrescine transport system, A... [more]
A0A836CP28_9STRA2.380e-1531.73P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7C2EDB5_9FIRM1.360e-831.41ABC transporter ATP-binding protein n=1 Tax=Firmic... [more]
A0A7C2I774_9FIRM5.050e-832.98ABC transporter ATP-binding protein n=1 Tax=Firmic... [more]
A0A0S8JI30_9BACT9.080e-830.32ABC transporter domain-containing protein n=3 Tax=... [more]
UPI001F2E04D81.930e-731.89ABC transporter ATP-binding protein n=1 Tax=Alicyc... [more]
A0A7W0X6Y7_9PROT3.750e-732.20ABC transporter ATP-binding protein n=1 Tax=Betapr... [more]
A0A843SPW0_9BACT4.170e-730.65ATP-binding cassette domain-containing protein n=1... [more]
UPI001F2209FF5.260e-731.41ATP-binding cassette domain-containing protein n=1... [more]
UPI00140947DA5.670e-732.20ABC transporter ATP-binding protein n=1 Tax=Motili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..180
e-value: 1.2E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR42788FAMILY NOT NAMEDcoord: 1..176
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13248contigH-elongata_contig13248:3882..8098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13248.2324.1mRNA_H-elongata_contig13248.2324.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13248 3882..8128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13248.2324.1 ID=prot_H-elongata_contig13248.2324.1|Name=mRNA_H-elongata_contig13248.2324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVA
RHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALA
QGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLV
FTSHSYRIVMELAKQVVELTKGRVTEVHIYIIST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase