prot_H-elongata_contig13245.2322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13245.2322.1
Unique Nameprot_H-elongata_contig13245.2322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
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BLAST of mRNA_H-elongata_contig13245.2322.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 3.320e-9
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:  120 YDNISEEDAPRFVPTVIFRGSHPVRSVGFSSDGGMFAAGSNDHTLR 165
            +D +  ++A RF PT++  GSHPVRSVGFS+DGG+FA G ND TLR
Sbjct:  696 FDRLVGDEASRFFPTILVSGSHPVRSVGFSADGGLFAVGCNDRTLR 741
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13245.2322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHR8_ECTSI3.320e-960.87CTLH domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13245contigH-elongata_contig13245:927..1646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13245.2322.1mRNA_H-elongata_contig13245.2322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13245 927..1646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13245.2322.1 ID=prot_H-elongata_contig13245.2322.1|Name=mRNA_H-elongata_contig13245.2322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
RPRQPAGQHCHASRPYQPGWQGKAVYQRLTEGGENTFQLQSPIFPPPSAT
HSPPSHDEREVKADSPVGSAQHAYSHVEDLSPDLGTIGEAGERSEDGAVS
GDEGIGGCNGNGIFITKRDYDNISEEDAPRFVPTVIFRGSHPVRSVGFSS
DGGMFAAGSNDHTLR
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