prot_H-elongata_contig102695.232.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102695.232.1
Unique Nameprot_H-elongata_contig102695.232.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A6H5K8F1_9PHAE (VDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8F1_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 4.560e-59
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +CFANIICLQTCNGR DEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPP E+QV +F+PKLMEGQWYISAGLNPAFD FDCQ
Sbjct:   80 KCFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIESQVKSFNPKLMEGQWYISAGLNPAFDTFDCQ 173          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: F0YAR5_AURAN (VDE domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR5_AURAN)

HSP 1 Score: 155 bits (393), Expect = 1.110e-45
Identity = 64/94 (68.09%), Postives = 79/94 (84.04%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN++C+ TC GRADE  CQIRCGDLFEN+ VG+FNACAVS+K CV QR DDG+WPVPP+E+ V AF+ ++ +G+WYISAGLNP FD FDCQ
Sbjct:   18 KCAANLVCINTCTGRADESECQIRCGDLFENDVVGEFNACAVSQKKCVPQRGDDGAWPVPPQESYVKAFNTQVFDGRWYISAGLNPVFDTFDCQ 111          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A7S2SKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.900e-43
Identity = 65/94 (69.15%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN+ C+QTCNGR DE  CQIRCGD+FENE VG+FNACAVS+K CV QRQDDG++PVPP  A V +F+ K  EG+WYISAGLNP FD F CQ
Sbjct:   57 KCLANLACIQTCNGRPDESACQIRCGDIFENEVVGEFNACAVSQKRCVPQRQDDGTFPVPPESALVRSFNTKQFEGRWYISAGLNPIFDTFPCQ 150          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A835ZCN5_9STRA (Violaxanthin de-epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.880e-42
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN+ C+QTC G+ADE  CQI+CGD FENE V KFNACAVS+K CV Q+QDD S+PVPP+EA V +FD  + +GQWYISAGLNP FD FDCQ
Sbjct:   72 KCIANLACIQTCAGKADETACQIKCGDYFENETVAKFNACAVSRKRCVPQKQDDNSYPVPPQEALVKSFDTSIFQGQWYISAGLNPIFDIFDCQ 165          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: K8Z7V3_NANGC (Violaxanthin de-epoxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7V3_NANGC)

HSP 1 Score: 150 bits (379), Expect = 3.760e-41
Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN+ICL TCN +ADE  CQI CGDLFENE VG+FNACA+SKK CV +++DDG++PVPP  A V++FD    +G+WYISAGLNP FDCFDCQ
Sbjct:  178 KCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQ 271          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A0M0JUT6_9EUKA (Violaxanthin de-epoxidase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUT6_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 9.660e-40
Identity = 61/93 (65.59%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    2 CFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            C AN++C+QTC GRADEG CQIRCGD F N+ VG F  CAV+ K CV QR DDGSWPVP +EA V +F P ++ G WYISAG N AFD FDCQ
Sbjct:   75 CAANLLCIQTCTGRADEGDCQIRCGDAFSNDVVGDFTKCAVTDKKCVPQRADDGSWPVPSKEALVASFSPDMLTGPWYISAGYNKAFDTFDCQ 167          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A8J2WYQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYQ1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.200e-39
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN++C+ +C GR DE  CQIRCGDLFENE VG FNACAVS+K CV QRQDDG++P P  EA V  FD ++  G+WYISAGLN AFD FDCQ
Sbjct:   83 KCAANLVCINSCTGRKDESECQIRCGDLFENEVVGDFNACAVSQKKCVPQRQDDGAYPEPSPEAIVKKFDTRVFNGRWYISAGLNDAFDTFDCQ 176          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A1B1Q5V0_9STRA (Violaxanthin de-epoxidase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1B1Q5V0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.130e-38
Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN+ICL TCN +ADE  CQI CGDLFENE VG+FNACA+SKK CV +++DDGS+PVP   A V +FD    +G+WYISAGLNP FD FDCQ
Sbjct:  132 KCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGSYPVPADSALVPSFDINSFKGKWYISAGLNPLFDIFDCQ 225          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A7S2DEM2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DEM2_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 7.000e-38
Identity = 58/93 (62.37%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    2 CFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            C AN++C+QTC  R DE  CQI+CGD F N  V  F  CAVS K CV QRQDDGSWPVP + A +  F P++M G WYISAGLN AFD FDCQ
Sbjct:   72 CAANLLCIQTCTNRPDEADCQIKCGDEFANNVVESFTKCAVSDKKCVPQRQDDGSWPVPQKSALIEKFSPEMMTGPWYISAGLNKAFDTFDCQ 164          
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Match: A0A7S2XNS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.920e-36
Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    1 RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ 94
            +C AN+IC+ TCNG+ADE  CQI+CGD+FEN+ VG+FN CAVS  +CV QRQDDGS+PVP     V+ FD K+  G+WYISAG N  FD F CQ
Sbjct:  144 KCLANVICINTCNGKADEMGCQIKCGDIFENDVVGEFNKCAVSDMDCVPQRQDDGSYPVPAPSQLVSKFDTKIFNGRWYISAGQNKLFDIFPCQ 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102695.232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8F1_9PHAE4.560e-5991.49VDE domain-containing protein n=2 Tax=Ectocarpus T... [more]
F0YAR5_AURAN1.110e-4568.09VDE domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S2SKA3_9STRA2.900e-4369.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZCN5_9STRA2.880e-4268.09Violaxanthin de-epoxidase chloroplast n=1 Tax=Trib... [more]
K8Z7V3_NANGC3.760e-4167.02Violaxanthin de-epoxidase n=3 Tax=Monodopsidaceae ... [more]
A0A0M0JUT6_9EUKA9.660e-4065.59Violaxanthin de-epoxidase n=1 Tax=Chrysochromulina... [more]
A0A8J2WYQ1_9STRA2.200e-3965.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1B1Q5V0_9STRA1.130e-3865.96Violaxanthin de-epoxidase n=1 Tax=Nannochloropsis ... [more]
A0A7S2DEM2_9EUKA7.000e-3862.37Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2XNS0_9STRA1.920e-3661.70Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 1..94
e-value: 3.0E-37
score: 128.4
IPR012674CalycinGENE3D2.40.128.20coord: 52..94
e-value: 3.5E-14
score: 55.0
NoneNo IPR availablePANTHERPTHR33970FAMILY NOT NAMEDcoord: 1..94
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102695contigH-elongata_contig102695:239..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102695.232.1mRNA_H-elongata_contig102695.232.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102695 239..1874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102695.232.1 ID=prot_H-elongata_contig102695.232.1|Name=mRNA_H-elongata_contig102695.232.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
RCFANIICLQTCNGRADEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQ
RQDDGSWPVPPREAQVTAFDPKLMEGQWYISAGLNPAFDCFDCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010788VDE
IPR012674Calycin