mRNA_H-elongata_contig13235.2320.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 228 bits (582), Expect = 3.660e-68 Identity = 111/146 (76.03%), Postives = 134/146 (91.78%), Query Frame = 2
Query: 230 RLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
RL KK+GNY+GKVRTNL RTEATVFTN+Q+VAE+GAISFEK GLV +LR+GSQPR+F+VLLPALD +G+P++H+VDP+DADSD+LSRMKQGRH +MF L++REPT+ +GNYRLNF+GRVT+PSVKNFQLVSPDD TVCQFGKV
Sbjct: 422 RLSKKNGNYLGKVRTNLKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHG-NMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKV 566
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.490e-49 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 2
Query: 227 RRLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
R L KK GNY+GKVR+N +T+ T++TN+Q+ E+GA+ FEK GLV ++ EGSQPR+F VLLP +D + PI H+VDP+D ++ +K R MF L+T++P FE GNYRLNF GRVT+PSVKNFQLV+PDD V QFGKV
Sbjct: 57 RTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLK-ARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKV 202
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.650e-46 Identity = 79/145 (54.48%), Postives = 107/145 (73.79%), Query Frame = 2
Query: 233 LKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
L KK+GNY+GK+RTNL +T+ ++TN+ + EMGAI F K G V ++EGSQPR+ VLLP LD +G P+ ++ +P D+ LL R++ + + MF L+T++P FE+GNYRLNF+GRVT+ SVKNFQL SPDD VCQFGKV
Sbjct: 38 LSKKNGNYLGKLRTNLRKTDTIIYTNDAEREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGK-MFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKV 181
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 156 bits (395), Expect = 6.140e-44 Identity = 76/145 (52.41%), Postives = 108/145 (74.48%), Query Frame = 2
Query: 233 LKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
L KK+GNY+GK+R+N +TE +FTN+ + E+GAI+FEK G + ++EGSQPR+ ++LP LD +G P+ ++ + ++ LLSR+K G+ MF ++++P FE+GNYRLNF+GRVT+ SVKNFQLVSPDD VCQFGKV
Sbjct: 75 LSKKNGNYLGKLRSNSKKTENVIFTNDHEKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGR-MFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKV 218
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.700e-34 Identity = 65/146 (44.52%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 230 RLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
RL+KK GNY+GK++ + + E ++ NE+ E+GA+ F K ++ ++R+G+QPR+ V+LP D PI + D + LL +++ + +E L+ +EP FE GNYRLNF+GRVT+PSVKNFQLV P D +CQFGKV
Sbjct: 74 RLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKV 219
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.020e-32 Identity = 65/146 (44.52%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 230 RLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
RL+KK GNY+GK++ + + E ++ NE+ E+GA+ F K ++ ++R+G+QPR+ V+LP D PI + D + LL +++ + +E L+ +EP FE GNYRLNF+GRVT+PSVKNFQLV P D +CQFGKV
Sbjct: 293 RLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKV 438
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.930e-31 Identity = 62/146 (42.47%), Postives = 96/146 (65.75%), Query Frame = 2
Query: 230 RLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
RL KK GNY+GK++ + ++ E ++ NE+K E+G + F K ++ ++R+G+QPR+ +++P ++ + PI V D LL++++ ++ + +EP FE GNYRLNF GRVT+PSVKNFQLVS DD + CQFGKV
Sbjct: 255 RLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQEVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKV 400
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A812Y244_SYMMI (Tulp3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y244_SYMMI) HSP 1 Score: 120 bits (300), Expect = 8.400e-31 Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 2
Query: 287 TEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEGAPISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
TE + T + E+ AI F++ GLV +++G QPR+ SVLLP LD E P+ HR + + M + MF L ++EP +E GNYRLNF+GRV++PSVKNFQL SPDD +CQFGK+
Sbjct: 1 TEYALVTRSEVREEVAAIVFDRVGLVSQIKDGCQPRKMSVLLPQLDAESHPVPHRTENKHGVKKSMVDMLKRDDTSRMFLLASKEPVYENGNYRLNFHGRVSVPSVKNFQLSSPDDPGHVICQFGKI 127
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 106 bits (265), Expect = 1.530e-24 Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 2
Query: 230 RLKKKSGNYMGKVRT-NLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDV-----EGAPISHRVDPFDADS--DLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
+L KK+GNY+GK+R N NR E ++ ++ E+ +SFEK L+ L EG+QPR+ +L+ DV EG S+ P +D D++ R K E+M L+T+EP E GNYRLNF GRV +PSVKNFQ+V + +CQFGKV
Sbjct: 72 KLSKKAGNYLGKLRARNTNRLECSLLNHKADKEELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTGTTEGVYPSNFGSPSLSDLLLDVVDRKKS--LPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKV 223
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.400e-23 Identity = 63/159 (39.62%), Postives = 99/159 (62.26%), Query Frame = 2
Query: 197 LTCSEVASERRRLKKKSGNYMGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVLLPALDVEG--APISHRVDPFDADSDLLSRMKQGRHDESMFPLKTREPTFERGNYRLNFNGRVTMPSVKNFQLVSPDDETCTVCQFGKV 667
++C VA+ + L KKSGNY+GK+R+ R E + +++++ E+GAI+FE S+PR+ +V+ P L +G + +VD F S L+ ++K G+ + + L+ +EP +E+G YRLNFNGRV++PSVKNFQLV + + QFGKV
Sbjct: 174 MSCGTVAASHK-LSKKSGNYIGKLRSCFGRHENVMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSD-LIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKV 321 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13235.2320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13235.2320.1 >prot_H-elongata_contig13235.2320.1 ID=prot_H-elongata_contig13235.2320.1|Name=mRNA_H-elongata_contig13235.2320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp MGKVRTNLNRTEATVFTNEQKVAEMGAISFEKAGLVGYLREGSQPRRFSVback to top mRNA from alignment at H-elongata_contig13235:391..2976- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13235.2320.1 ID=mRNA_H-elongata_contig13235.2320.1|Name=mRNA_H-elongata_contig13235.2320.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2586bp|location=Sequence derived from alignment at H-elongata_contig13235:391..2976- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13235:391..2976- >mRNA_H-elongata_contig13235.2320.1 ID=mRNA_H-elongata_contig13235.2320.1|Name=mRNA_H-elongata_contig13235.2320.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig13235:391..2976- (Himanthalia elongata Himel1 dioecious)back to top |