mRNA_H-elongata_contig13226.2314.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: D7FM78_ECTSI (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM78_ECTSI) HSP 1 Score: 452 bits (1163), Expect = 1.090e-157 Identity = 217/272 (79.78%), Postives = 243/272 (89.34%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLERPPL 816
VPPFFGAELC DG +IKGRGACDTKGILAAQLLALQAL DEGVDD+GLLYVVSEETDHSGM+KAN+LGL+P YMIVGEPT S MMRLQKGMLKVR+SCRGVACHSGYPHLG SA+DP+VEVLHA+K+ +WPSS+ELGETT+NIGL+EGGQAANALAE A+VM+RLI EPE VL V+AI+ +H C VEVISKN+PV+LEVLP FE DVAAYNTD+AYFKL +GRA+L+GPGSIHHAHSR EKIG EL+DAVEAYKKIA CL RPPL
Sbjct: 103 VPPFFGAELCDVDGEMIIKGRGACDTKGILAAQLLALQALADEGVDDIGLLYVVSEETDHSGMIKANELGLEPRYMIVGEPTGSKMMRLQKGMLKVRLSCRGVACHSGYPHLGVSAIDPLVEVLHAIKHRAWPSSEELGETTVNIGLVEGGQAANALAEASEAIVMFRLIQEPEGVLDAVKAIAAEHDCAVEVISKNAPVSLEVLPDFEADVAAYNTDIAYFKLPKGRALLYGPGSIHHAHSRIEKIGVTELKDAVEAYKKIAKSCLGRPPL 374
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A836C872_9STRA (M20_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C872_9STRA) HSP 1 Score: 352 bits (904), Expect = 4.380e-119 Identity = 175/264 (66.29%), Postives = 210/264 (79.55%), Query Frame = 1
Query: 1 VPPFFGAEL-CHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIA 789
VPP+ A + DG VI GRGACDTKGILAAQL ALQ LVD G D GLLYVVSEETDHSGM+ +NDLGLDPD+++VGEPT S MMRLQKGMLK+R+ C+GVACHSGYP LGKSA+DP+V VL L + WP+S+ELG TTLNIGL+ GGQAANALAE A +M+RL EPE VL++V++I + T+++I++NSPV L VLPGFE DVAAYNTD+AYF G+A+L+GPGSIHHAHSRTEKI E+ A++AY KIA
Sbjct: 47 VPPYIPARVETALDGDLVIWGRGACDTKGILAAQLTALQHLVDGGCSDAGLLYVVSEETDHSGMLASNDLGLDPDFLVVGEPTGSKMMRLQKGMLKMRLECKGVACHSGYPQLGKSAIDPLVAVLQRLNDTKWPASEELGATTLNIGLVNGGQAANALAEHAEATLMFRLTDEPEVVLAIVKSILEGTDVTMQIITQNSPVKLAVLPGFETDVAAYNTDIAYFNFT-GKALLYGPGSIHHAHSRTEKILGSEITAAIDAYTKIA 309
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A4D9D6V3_9STRA (M20_dimer domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6V3_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.050e-93 Identity = 155/273 (56.78%), Postives = 193/273 (70.70%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEG-VDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKR--GRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLERP 810
VPPF+ A + ++G VI+GRGACDTKGILAAQLLA Q LV+ G D+GLLYVVSEETDHSGM +AN L L P++++VGEPT S M+R QKG+LK+R+ GV+CHSGYP LGKSA+DP+V+ L LK A WP ++ELG TTLNIGL++GG AANALA A +++RLI PE+VL V A VEVI+ N+PV L L G+ DVA +NTD+AYF L+ +A L GPGSI AHS E I ELQ AV Y++I L+ P
Sbjct: 99 VPPFYSATVDRQNG--VIRGRGACDTKGILAAQLLAAQRLVESGQAADLGLLYVVSEETDHSGMKQANSLNLRPNFLLVGEPTESKMIRSQKGLLKLRLLSHGVSCHSGYPSLGKSAIDPLVDALQDLKRAHWPQNEELGATTLNIGLLKGGHAANALAAEAEATLVFRLITPPEQVLETVRATVGDRA-DVEVITANTPVQLNTLEGYATDVACFNTDIAYFDLREPTAQAFLMGPGSILDAHSDHELIQIPELQRAVAYYEEILLRLLKGP 368
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A7S1C340_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C340_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.570e-88 Identity = 148/275 (53.82%), Postives = 188/275 (68.36%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVD-----DVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAIS-KQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGR-AVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLE 804
VPP FGA L + A I GRGACDTKG+LAAQL A QA + +VG+LYVVSEETDHSGM+ AN L L P M+VGEPT S ++RLQKGMLK R+ GVA HSGYPHLGKSA+DP+V L L +WPSS ELG+TTLN+G+I GGQAANA AE A++M+R I +P E+L++ A++ K G V ++ N P+TL V+ GF+ +A +NTD+AYF L G A L GPG+I AH E I KE++DAV Y+++ + LE
Sbjct: 233 VPPHFGATLSADGRA--IHGRGACDTKGVLAAQLSAAQAFAEAHAGTPMEREVGILYVVSEETDHSGMIAANALRLAPTAMVVGEPTESKLVRLQKGMLKCRLVSTGVAAHSGYPHLGKSAIDPLVAALGDLAKTAWPSSPELGDTTLNVGIISGGQAANATAEHAEALLMFRAISDPNELLAMTRAVAAKYDGVEVVPVTMNMPLTLGVVEGFDTGIACFNTDIAYFDLPEGSTAYLVGPGAITDAHCPREYINIKEMEDAVGLYRRLMDRLLE 505
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: K3WGI3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGI3_GLOUD) HSP 1 Score: 273 bits (697), Expect = 3.260e-82 Identity = 140/270 (51.85%), Postives = 192/270 (71.11%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEG-VDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLER 807
VPPF A DG T+ GRG+CD K ++AAQ++A Q LV+ G +DVGLLYVVSEETDHSGM KAN+LGL P +M+VGEPT+ M+RLQKG+LK+R+S +G A HSGYPHLG SA+DP+++VLH LK+ WP+S+ELG TTLNIG+I GGQAANA+ E A++M+RL PE+++ V+ I +E+ + NSPV L V+ G+E D+A++NTD+ YF+ G A L G G+I AH E I ++L++ V+ Y + +E+
Sbjct: 578 VPPFLPART---DGKTLY-GRGSCDAKSLVAAQMIASQKLVEAGFAEDVGLLYVVSEETDHSGMKKANELGLKPKHMVVGEPTDMKMIRLQKGILKIRLSRQGAAAHSGYPHLGDSAIDPLIDVLHDLKHEQWPNSEELGATTLNIGIINGGQAANAIPEYASAMLMFRLTTNPEKIMDRVKKIVSGR-VDIELYTSNSPVHLTVVEGYETDIASFNTDIPYFQFD-GNAYLVGAGNITDAHCAREFIEIEDLRNLVDFYFTLGKTLIEK 841
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A8K1C4Z1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Z1_PYTOL) HSP 1 Score: 270 bits (690), Expect = 2.650e-81 Identity = 140/268 (52.24%), Postives = 188/268 (70.15%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVD-DVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCL 801
VPPF A DG + GRG+CD K ++AAQ++A Q LV+ G + DV +LYVVSEETDHSGM KAN+LGL P ++IVGEPT M++LQKG+LKVR++ +G+A HSGYPHLG SA+DP+++VL+ LK+ WPSS+ELG TTLNIG+I GGQAANALAE A++M+RL P+E+L V +I VE+ + N+PV L V+ G++ DVA++NTD+ YFK G+A L G GSI AH E I +L+ V+ Y + +
Sbjct: 562 VPPFLPART---DGQKIY-GRGSCDAKSLIAAQMIAAQKLVESGYENDVSVLYVVSEETDHSGMKKANELGLTPSHLIVGEPTKLKMIKLQKGILKVRLTRKGIAAHSGYPHLGDSAIDPLIDVLYDLKHEKWPSSEELGATTLNIGIISGGQAANALAEHASAMLMFRLTTNPDEILDRVNSIVNGR-VDVELYTSNAPVHLSVVDGYDTDVASFNTDIPYFKFD-GKAYLVGAGSITDAHCSREYIDIADLETLVDFYFNLGKKLI 823
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A8J7U6M1_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7U6M1_9BACT) HSP 1 Score: 256 bits (654), Expect = 4.580e-81 Identity = 124/267 (46.44%), Postives = 186/267 (69.66%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCL 801
VPPFF A + E+G + GRGACDTK ++AAQLLA Q LV+ G DD+ LLYVV EE DH GM+ AN+LGL PDY+IVGEPT S ++ QKG+LK+ ++C+G A HSGYPH G+SA+DP++++L ++ WP+ LGETT+NIG+++ G+AAN + + +A V++R++ E+L+ V ++ + ++V++ N PV L + G+ V ++NTD+ YF+ G+A L+G GSI AH+ EKI +L++AV Y+++A L
Sbjct: 72 VPPFFPATI--ENGT--LYGRGACDTKSLIAAQLLAAQELVEAGRDDIALLYVVGEEVDHIGMIHANELGLKPDYLIVGEPTESKLVTRQKGILKLALTCKGKAAHSGYPHTGRSALDPLLDLLEKIRKHPWPAETRLGETTVNIGVLKSGKAANIVPDHAYAEVLFRVVTHQTELLAQVRDMADER-VEIQVVAANDPVELNTVAGYPTTVVSFNTDIPYFQFG-GKAFLWGAGSITDAHTAGEKIEIADLEEAVHIYRRLAEQLL 332
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A5D6Y8X3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8X3_9STRA) HSP 1 Score: 269 bits (688), Expect = 5.020e-81 Identity = 143/269 (53.16%), Postives = 187/269 (69.52%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEG-VDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLE 804
VPPF A DG T+ GRG+CD K ++AAQ+LA Q LVD G DDVGLLYVVSEE+DHSGM KAN+LG++P +M+VGEPT M +LQKGMLK+R+S +GVA HSGYPHLG+SA+DP+++VLH LK+ WPSS ELG TTLNIG+I GGQAANA+ + A++M+RL P+E+L+ VE I VE+ + N+PV L V+ G+E D+ ++NTD+ YF G A L G G+I AH E I +L+ V Y + +E
Sbjct: 561 VPPFLPART---DGTTLF-GRGSCDAKSLVAAQMLAAQQLVDAGYADDVGLLYVVSEESDHSGMKKANELGVNPRHMVVGEPTAMKMAKLQKGMLKLRLSRKGVAAHSGYPHLGESAIDPLIDVLHDLKHEPWPSSDELGTTTLNIGMISGGQAANAIPDFASAMLMFRLTTAPDEILARVERIVGGR-VDVELYTSNAPVHLSVVEGYETDIVSFNTDIPYFAFD-GSAYLVGAGNITDAHCAREFIEIADLRRLVGFYFDLGKTLIE 823
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A8A4TL93_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TL93_9BACT) HSP 1 Score: 249 bits (636), Expect = 2.700e-78 Identity = 124/267 (46.44%), Postives = 177/267 (66.29%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVDDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCL 801
VPP+F A T + GRGACDTK ++AAQLLA + L+ EG +D G LYVV EE DH GM+KAN+LGL P ++IVGEPT S + R QKG+LK++++ +G A HSGYPH G +A+DPM+++L ++ WPS +LGETT+NIG++ G+AAN + + +A V++R++ E+L V ++ V VI+ N P L L G+E V ++NTD+ Y K GRA L+G GSI AH+ E+I +L+ AV+ Y ++A CL
Sbjct: 76 VPPYFPARRDE----TTLYGRGACDTKSLIAAQLLAGEKLLAEGREDFGYLYVVGEEVDHIGMIKANELGLSPQFLIVGEPTESKLARRQKGILKLKLTTQGKAAHSGYPHTGINALDPMLDLLERIRRHPWPSEAQLGETTVNIGVLRSGRAANVVPDEAYAEVLFRVVTHQAELLEEVRTMAGD-AVEVSVIASNDPTELSTLDGYETSVVSFNTDIPYLKFD-GRAFLWGAGSIMDAHTAREQIEIADLEAAVDIYAELARTCL 336
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Match: A0A3R7HS81_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HS81_9STRA) HSP 1 Score: 253 bits (646), Expect = 6.730e-75 Identity = 134/269 (49.81%), Postives = 184/269 (68.40%), Query Frame = 1
Query: 1 VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGV-DDVGLLYVVSEETDHSGMVKANDLGLDPDYMIVGEPTNSNMMRLQKGMLKVRISCRGVACHSGYPHLGKSAVDPMVEVLHALKNASWPSSKELGETTLNIGLIEGGQAANALAETCHAVVMYRLIGEPEEVLSVVEAISKQHGCTVEVISKNSPVTLEVLPGFEVDVAAYNTDVAYFKLKRGRAVLFGPGSIHHAHSRTEKIGAKELQDAVEAYKKIANHCLE 804
VPP+ + +D T + GRGACD K ++A Q++A Q LV+ G+ DDV LL+VVSEETDHSGM KAN+L ++P+++IVGEPT M R+QKG+LK++++ GVA HSGYPHLG SA+DPM++VL+ LK +WPSS+E G T LNIGL+ GGQAANALAE A++M+RL EP+ + VE I +++ S N+PV L V+ G++ VA +NTDV YF G+A L G GSI AH E I ++L+ V+ Y + +E
Sbjct: 565 VPPYLPPRI--DD--TTLYGRGACDAKSLIAGQMIAAQKLVEAGLGDDVQLLFVVSEETDHSGMKKANELNVNPEHLIVGEPTALKMSRIQKGVLKIQLTQNGVAAHSGYPHLGDSAIDPMIDVLYDLKKEAWPSSEECGSTDLNIGLLNGGQAANALAEESSAMLMFRLTTEPDVIYKRVEEIVAGR-VGMKLYSANAPVRLTVVEGYDTGVACFNTDVPYFNFD-GKAYLVGAGSITDAHCPREFIMLEDLKGVVDYYFTLGKRLIE 827 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13226.2314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13226.2314.1 >prot_H-elongata_contig13226.2314.1 ID=prot_H-elongata_contig13226.2314.1|Name=mRNA_H-elongata_contig13226.2314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp VPPFFGAELCHEDGATVIKGRGACDTKGILAAQLLALQALVDEGVDDVGLback to top mRNA from alignment at H-elongata_contig13226:243..5275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13226.2314.1 ID=mRNA_H-elongata_contig13226.2314.1|Name=mRNA_H-elongata_contig13226.2314.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5033bp|location=Sequence derived from alignment at H-elongata_contig13226:243..5275- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13226:243..5275- >mRNA_H-elongata_contig13226.2314.1 ID=mRNA_H-elongata_contig13226.2314.1|Name=mRNA_H-elongata_contig13226.2314.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1638bp|location=Sequence derived from alignment at H-elongata_contig13226:243..5275- (Himanthalia elongata Himel1 dioecious)back to top |