mRNA_H-elongata_contig13203.2301.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE) HSP 1 Score: 106 bits (264), Expect = 8.270e-25 Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 1 TSLMPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLTHARNVDAKELSERFSSANGVEQV 237
T PG+L HD+QATIR FY+V EAQ CP E+LYL M GTDGLE+LF +VRTLTHA NVDAKE ERF + GVEQV
Sbjct: 76 TRFKPGQLDHDLQATIRLLFYVVLEAQVRCPRERLYLWMIGTDGLENLFAIVRTLTHASNVDAKEAIERFGAVIGVEQV 154
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A165WRF7_9AGAM (Uncharacterized protein n=1 Tax=Sistotremastrum suecicum HHB10207 ss-3 TaxID=1314776 RepID=A0A165WRF7_9AGAM) HSP 1 Score: 64.3 bits (155), Expect = 5.530e-10 Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 TSLMPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
T MP +L+ D I+ ++ V++ Q P+ + ++ + GTD LESLF +VRT+T + N D +LS R SSA +++ KHP R+ +RL
Sbjct: 466 TKFMPTQLYADQMIMIKNVYFCVAKYQAYNPDSQFHIILLGTDRLESLFGMVRTMTGNDSNADLYQLSHRLSSAAHCSEIFAKHPDWDRSPRRL 559
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A165LB28_EXIGL (Uncharacterized protein (Fragment) n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165LB28_EXIGL) HSP 1 Score: 61.6 bits (148), Expect = 5.080e-9 Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 1 TSLMPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
+ LMP +L+ D+ I+ ++ V++AQR PN ++ + GTD LE LF ++RT+ + NVDA +LS R + V + K+P R KRL
Sbjct: 866 SKLMPTQLYVDIMIMIKNVYFCVAKAQRDDPNGSFWVILLGTDRLEELFGILRTMIGNDANVDALQLSTRVTGTTEVSTILAKYPHWDRAPKRL 959
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A8H6ZLW2_PLEOS (Uncharacterized protein n=1 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A8H6ZLW2_PLEOS) HSP 1 Score: 61.2 bits (147), Expect = 6.700e-9 Identity = 32/94 (34.04%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 TSLMPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
T LMP +L+ DM ++ ++ V++A+ P+ + ++ + GTD LE+LF ++RT+ + NVDA +L R + V + KHP+ R +RL
Sbjct: 309 TKLMPTQLYIDMMIMVKNVYFCVAKAKVDAPDSQFWITLLGTDRLETLFGILRTMIGNDANVDAYQLGSRLTGTAEVSTILAKHPEWDRAPRRL 402
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A8H7DT02_PLEOS (PHD domain-containing protein n=1 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A8H7DT02_PLEOS) HSP 1 Score: 61.2 bits (147), Expect = 6.940e-9 Identity = 32/94 (34.04%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 TSLMPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
T LMP +L+ DM ++ ++ V++A+ P+ + ++ + GTD LE+LF ++RT+ + NVDA +L R + V + KHP+ R +RL
Sbjct: 620 TKLMPTQLYIDMMIMVKNVYFCVAKAKVDAPDSQFWITLLGTDRLETLFGILRTMIGNDANVDAYQLGSRLTGTAEVSTILAKHPEWDRAPRRL 713
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A5C3N1J9_9AGAM (PHD domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3N1J9_9AGAM) HSP 1 Score: 59.7 bits (143), Expect = 2.430e-8 Identity = 31/91 (34.07%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 10 MPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
+P +L++D+ I+ ++ V++A PN K YL + GTD LE+LF +VRT+ + N D +LS R ++A+ + + HP+ + +RL
Sbjct: 861 VPVQLYYDVMTMIKNAYFCVAKAMSANPNGKFYLILLGTDSLETLFGIVRTMVGNDTNADQLQLSSRLTTASLCSSLLQLHPEWDQGPRRL 951
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A5C3MMY6_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MMY6_9AGAM) HSP 1 Score: 58.2 bits (139), Expect = 8.290e-8 Identity = 32/91 (35.16%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 10 MPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
MP +L++D+ + I+ ++ V++A P+ K YL + GTD LE+LF +VRT+T + N D +L+ R ++A+ + + HP R +RL
Sbjct: 592 MPVQLYYDVVSMIKNAYFCVAKAIVANPDGKFYLILLGTDSLETLFGIVRTMTGNDTNADQLQLASRLTTASLCSSLLQLHPTWDRGPRRL 682
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A5C3N381_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3N381_9AGAM) HSP 1 Score: 55.5 bits (132), Expect = 1.040e-7 Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 25 FHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLT-HARNVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
++D+ I+ ++ V++A PN K YL + GTD LE+LF +VRT+ + N D +LS R ++A+ + + HP+ + +RL
Sbjct: 1 YYDVMTMIKNAYFCVAKAMSANPNGKFYLILLGTDSLETLFGIVRTMVGNDTNTDQLQLSSRLTTASLCSSLLQLHPEWDQGPRRL 86
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: A0A0W0FA72_9AGAR (PHD domain-containing protein n=1 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FA72_9AGAR) HSP 1 Score: 57.0 bits (136), Expect = 2.080e-7 Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 10 MPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLTHAR-NVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
+P L+ D+Q I+ F+ V++A+R P+ + ++ + GTD LE LF +VRTL N+D +L++R + A V + HP+ +T +RL
Sbjct: 268 LPTTLYVDIQIMIKNVFFCVAKAKRDDPDGEFFIILLGTDRLEILFGIVRTLVANNCNLDILQLADRLNGALEVANILALHPEWDKTPRRL 358
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Match: V2WNZ6_MONRO (Uncharacterized protein n=1 Tax=Moniliophthora roreri (strain MCA 2997) TaxID=1381753 RepID=V2WNZ6_MONRO) HSP 1 Score: 57.0 bits (136), Expect = 2.120e-7 Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 10 MPGKLFHDMQATIRAKFYLVSEAQRCCPNEKLYL*MAGTDGLESLFVVVRTLTHAR-NVDAKELSERFSSANGVEQVYEKHPQLRRTSKRL 279
+P L+ D+Q I+ F+ V++A+R P+ + ++ + GTD LE LF +VRTL N+D +L++R + A V + HP+ +T +RL
Sbjct: 268 LPTTLYVDIQIMIKNVFFCVAKAKRDDPDGEFFIILLGTDRLEILFGIVRTLVANNCNLDILQLADRLNGALEVANILALHPEWDKTPRRL 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13203.2301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13203.2301.1 >prot_H-elongata_contig13203.2301.1 ID=prot_H-elongata_contig13203.2301.1|Name=mRNA_H-elongata_contig13203.2301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp MAGTDGLESLFVVVRTLTHARNVDAKELSERFSSANGVEQVYEKHPQLRRback to top mRNA from alignment at H-elongata_contig13203:2652..2930- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13203.2301.1 ID=mRNA_H-elongata_contig13203.2301.1|Name=mRNA_H-elongata_contig13203.2301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=279bp|location=Sequence derived from alignment at H-elongata_contig13203:2652..2930- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13203:2652..2930- >mRNA_H-elongata_contig13203.2301.1 ID=mRNA_H-elongata_contig13203.2301.1|Name=mRNA_H-elongata_contig13203.2301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at H-elongata_contig13203:2652..2930- (Himanthalia elongata Himel1 dioecious)back to top |