mRNA_H-elongata_contig132.2299.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE) HSP 1 Score: 179 bits (455), Expect = 8.080e-50 Identity = 84/133 (63.16%), Postives = 103/133 (77.44%), Query Frame = 2
Query: 5 VLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKAQDAC 403
VLIVNVASHC TD+ YRELQ LRA H E++LAIVAFP NQFG EPGTW++I + A +GVTFPIM K+++NG S P+FAWLKAASGNP ++ WNF KFLV+ G VKRYSHEV+ MQ+++ I A+ C
Sbjct: 47 VLIVNVASHCGYTDRDYRELQALRAKHDEDQLAIVAFPCNQFGAQEPGTWEEIASLADGKFGVTFPIMSKIDVNGLHSSPIFAWLKAASGNPHDIPWNFTKFLVLCGSTVKRYSHEVNPMQMDDMITNARSFC 179
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: D8LS13_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS13_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.960e-48 Identity = 85/132 (64.39%), Postives = 101/132 (76.52%), Query Frame = 2
Query: 5 VLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKAQDA 400
VLIVNVAS C +++Y ELQ LR + EE+LAIVAFP NQFGG EPG+WQ+I + A +GVTFPIMGKV +NG S PLFAWLKAASG P N++WNF KFLV+GG+ V RYSHEV+ QIE +II A A
Sbjct: 32 VLIVNVASQCSTAERNYLELQALREAYDEEELAIVAFPCNQFGGQEPGSWQEISSSAERRFGVTFPIMGKVEVNGLRSQPLFAWLKAASGVPGNIEWNFTKFLVVGGNHVTRYSHEVNPSQIEQDIISAPSA 163
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA) HSP 1 Score: 132 bits (331), Expect = 6.820e-32 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKA 391
V L+VNVAS C TD +YRELQ L ++ E+ ++AFP NQFG EPG+ DI +F YGVTFP+M KV +NG DPLF +LK A+G+ ++WNF KFLV+ G K YSH S IE++I+ A
Sbjct: 53 VALVVNVASQCGYTDTNYRELQQLYEEYEEDGFIVLAFPCNQFGSQEPGSPADIRDFTTEKYGVTFPLMAKVEVNGDGEDPLFTFLKEATGSGP-LKWNFSKFLVVNGVPRKHYSHSTSPSAIEDDIVDA 181
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A6G0XJ61_9STRA (Glutathione peroxidase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ61_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.420e-30 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKAQDACADLGHEM*SILPNN 445
V+LIVNVAS C TD +YRELQ L+ ++ ++AFP NQFG EPGT+ I+NFA++ Y V F I K+++NG S PL+ WLK++ N VQWNF KF+V+ G KRY++ V +E +I+ A L HE P+N
Sbjct: 46 VMLIVNVASECGFTDSNYRELQRLQDEYHVFGFEVLAFPCNQFGEQEPGTYDQIINFAQTKYNVNFNIFDKIDVNGPNSHPLYRWLKSSLDNKP-VQWNFEKFIVVDGYPWKRYAYNVDFETLEEDILYA------LAHESEFHHPDN 186
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: W7TAD6_9STRA (Glutathione peroxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAD6_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.880e-29 Identity = 59/135 (43.70%), Postives = 89/135 (65.93%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKA-----ASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKA 391
VVLIVNVAS C TD +YR+LQ L+ + ++ L ++A PSN+FGG EPG+ +I+ F + Y VTFP+ K+ +NG + L+ WLKA +S + +++WNF KFL++ G VKR++H + E EI++A
Sbjct: 58 VVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQA 192
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: W4GC34_9STRA (Glutathione peroxidase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GC34_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.000e-29 Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKA 391
V+L+VNVAS C TD +YR LQ ++ + I+A PSNQFG EPGT+ DIV FA + Y V F I KV++NG + PL+ WLK+ + ++ WNF KF V+ G KR +H V++ +E+EI+ A
Sbjct: 46 VILVVNVASECGFTDVNYRALQKYYDEYHQYGFEIIAVPSNQFGAQEPGTYDDIVQFATTTYNVEFQIFDKVDVNGPTAHPLYTWLKSNVDDGRDIAWNFEKFFVVDGQPWKRIAHNVNLNSLEDEILYA 175
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A024U885_9STRA (Glutathione peroxidase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U885_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.340e-28 Identity = 64/141 (45.39%), Postives = 89/141 (63.12%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKA--ASGNPVNVQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKAQDACADLGH 418
V+L+VNVAS C TD +YR LQ ++ + IVA PSNQFG EPGT+ DIV FA+++Y V F I KV++NG + PL+ WLKA + +V WNF KFLV+ G R +H V++ ++E++I+ A AD H
Sbjct: 45 VILVVNVASECGFTDINYRALQKYYDEYHQFGFEIVAVPSNQFGAQEPGTYDDIVQFAKTNYNVGFRIFDKVDVNGPNAHPLYTWLKANVPDDDGRDVAWNFEKFLVVDGKPWNRVAHNVNLDKVEDKILYALAHEADYHH 185
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A1V9ZWS9_9STRA (Glutathione peroxidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWS9_9STRA) HSP 1 Score: 120 bits (300), Expect = 6.360e-28 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 2
Query: 5 VLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAA-SGNPVN-VQWNFGKFLVIGGDVVKRYSHEVSIMQIENEIIKAQDA 400
+L+VNVAS C T+ +Y+ELQTL + E+ L I+AFP NQFGG EPG++++I+ F + Y VTFPI K+++NG +DPLF +LKA +G N ++WNF KFL+ G+ KRY+ S + IE I+ D+
Sbjct: 40 ILVVNVASACGFTNSNYKELQTLYNKYHEKGLEILAFPCNQFGGQEPGSYEEILAFTQK-YEVTFPIFQKIDVNGDNADPLFKYLKAELTGTITNDIKWNFTKFLIAYGNPYKRYATTTSPLGIEKAIVHILDS 172
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A8IWW7_CHLRE (Glutathione peroxidase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8IWW7_CHLRE) HSP 1 Score: 120 bits (301), Expect = 8.450e-28 Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 2
Query: 5 VLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPV--NVQWNFGKFLVIG-GDVVKRYSHEVSIMQIENEIIKA 391
VL+VN+AS C T + Y ELQ L+ + ++ ++ FP NQFG EPG+ Q I FA+S+YGVTFP+M KV++NG ++PLF WLK G + +++WNF KFL+ GDVV RY S + +EN+I KA
Sbjct: 69 VLVVNLASACGFTPQ-YAELQDLQDKYGKQGFVVLGFPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQKGGLLTSDIKWNFSKFLINKEGDVVGRYGSTSSPLSLENDIKKA 199
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Match: A0A383WD34_TETOB (Glutathione peroxidase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WD34_TETOB) HSP 1 Score: 119 bits (299), Expect = 1.560e-27 Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 2
Query: 2 VVLIVNVASHCELTDKHYRELQTLRADHAEEKLAIVAFPSNQFGGCEPGTWQDIVNFARSHYGVTFPIMGKVNINGHLSDPLFAWLKAASGNPVN--VQWNFGKFLVIG-GDVVKRYSHEVSIMQIENEIIK 388
VVL+VN+AS C T + Y ELQ L ++ + L ++ FP NQFG EPG+ DI FA+ YGVTFP+MGKV++NG ++PLF WLK+ G +N ++WNF KFLV G+VV RY + Q+E ++ K
Sbjct: 67 VVLVVNLASACGFTPQ-YAELQDLYQKYSSKGLVVLGFPCNQFGQQEPGSNSDIKAFAKKSYGVTFPLMGKVDVNGGSAEPLFKWLKSEKGGFLNSDIKWNFSKFLVDKEGNVVGRYGSTTTPKQLETDLAK 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig132.2299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig132.2299.1 >prot_H-elongata_contig132.2299.1 ID=prot_H-elongata_contig132.2299.1|Name=mRNA_H-elongata_contig132.2299.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp MGKVNINGHLSDPLFAWLKAASGNPVNVQWNFGKFLVIGGDVVKRYSHEVback to top mRNA from alignment at H-elongata_contig132:11963..14267+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig132.2299.1 ID=mRNA_H-elongata_contig132.2299.1|Name=mRNA_H-elongata_contig132.2299.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2305bp|location=Sequence derived from alignment at H-elongata_contig132:11963..14267+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig132:11963..14267+ >mRNA_H-elongata_contig132.2299.1 ID=mRNA_H-elongata_contig132.2299.1|Name=mRNA_H-elongata_contig132.2299.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig132:11963..14267+ (Himanthalia elongata Himel1 dioecious)back to top |