mRNA_H-elongata_contig131957.2295.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE) HSP 1 Score: 150 bits (378), Expect = 5.960e-39 Identity = 82/158 (51.90%), Postives = 98/158 (62.03%), Query Frame = 1
Query: 76 PSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEEQVE----------------------------------GQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEAA 447
PS + A+EHP +FK+FKM+ MGMP+GAALQ M K GVD+A+LD PDA++PLSAE+Q E G PKGM AKDHP Y YFKML+MG+ +GAALQ M +DGVDQ+ILDTPEAL LP E G A AA
Sbjct: 2159 PSEVAAKEHPEFFKFFKMLAMGMPKGAALQAMAKAGVDQAVLDTPDALLPLSAEQQAELAERRDAAAAAAMLSAEAENQRDGERGEGASPPAGPPKGMAPAKDHPDYQSYFKMLKMGIPRGAALQKMAKDGVDQSILDTPEALFSLP--ESGGEAAAA 2314
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI) HSP 1 Score: 145 bits (366), Expect = 2.420e-37 Identity = 78/135 (57.78%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 70 TGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEE---------QVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEAA 447
T PS + A++HP Y KYFKM+KMG+PRGAALQKM +G D+AILD PDAM+PL+ E MVAAKDHP Y KYFKML+MG+ +GAALQ M +G DQAILDTP+A+LPL E G A AA
Sbjct: 1806 TAPSMVAAKDHPDYQKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDAMLPLAETEGGAAXXXXXXXXXTAPSMVAAKDHPDYQKYFKMLKMGLPRGAALQKMATEGKDQAILDTPDAMLPLA--ETEGGAAAA 1938
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A1V9ZW19_9STRA (Formin-homology 2 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW19_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.990e-25 Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 79 SAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEAAP 450
+A++A EHP Y KYFK++KMGMP K +G+D AILD PDA+IPL A E +G MV K+HP Y KYFK+++MGM M +GVD +L TP+ L+PL D+ S A P
Sbjct: 185 AAVKAEEHPDYVKYFKLLKMGMPLEHVKLKASSEGIDTAILDTPDAIIPLPALEVPQGPV--MVPIKEHPDYAKYFKLMKMGMPAMQVELKMNAEGVDATVLSTPDKLVPLADDKSSNQQTAQP 306
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A1V9Y9P9_9STRA (Formin-homology 2 domain-containing protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9P9_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.620e-22 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 79 SAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLP 408
+ A +HP + KYFK++KMGMP K +GVD A+LD PD +PL+ E MVA KDHP Y KYFK+L+MGM M +GVD A+L TP+AL+P
Sbjct: 893 ATARAADHPTFAKYFKLLKMGMPLEHVKLKAASEGVDAAVLDTPDRELPLATAEASAPAGPPMVATKDHPKYAKYFKLLKMGMPSMQVELKMQAEGVDPAVLATPDALIP 1002
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: G5ACL8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ACL8_PHYSP) HSP 1 Score: 99.4 bits (246), Expect = 3.210e-21 Identity = 56/127 (44.09%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 22 LTKDLKTL-SALQNKEETGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILD----APDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILD 387
L D+K + S + E+ S + ++H Y KYFKM+KMG+P GA QKM D VDE LD AP + +P AE++V PK + KD P + KYFKML+MG+ +GA Q M DGVD L+
Sbjct: 682 LQDDIKCVNSPTSSSEKDSHSEVLLKDHEVYAKYFKMLKMGLPEGAVRQKMKADEVDERALDLGGDAPFSKLPKPAEKEVSVDPKNDMKLKDDPKFAKYFKMLQMGLPEGAVRQKMKADGVDDRALE 808
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: D0N1G4_PHYIT (Formin-homology 2 domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=D0N1G4_PHYIT) HSP 1 Score: 99.0 bits (245), Expect = 4.450e-21 Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 64 EETGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEAAPT-PLIPAPP 474
E+ P + ++H + KYFK+I+MGMP K +G+D +LDAPD ++ +E G K +V A +HP YVKYFK+L+MGM + M + +D +LDTP+ ++P ++VSG+A AP P + PP
Sbjct: 1185 EDVAPKGVPVKQHEKFAKYFKLIEMGMPLPHIKLKAASEGLDGDLLDAPDKLVDEDGKEIKAGSGKKVVMASEHPSYVKYFKLLKMGMPRPQLELKMSAESLDPKVLDTPDKMIP---EDVSGTAPKAPVKPAVTGPP 1319
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A6A3U6I3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U6I3_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.230e-20 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 64 EETGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILD----APDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILD 387
+++ S + ++H Y KYFKM+ MG+P GA QKM DGVDE LD AP + +P AE + PK + KD P + KYFKML+MG+ +GA Q M DGVD LD
Sbjct: 848 DKSAASEVLLKDHEVYAKYFKMLSMGLPEGAVRQKMKVDGVDERALDLGGDAPFSKLPKPAETENSVDPKNDMKLKDAPKFAKYFKMLQMGLLEGAVRQKMKVDGVDDRALD 959
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A662XIZ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIZ2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.650e-20 Identity = 61/142 (42.96%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 22 LTKDLKTLSALQN--KEETGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILD-APDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSA 438
L D+K+++ Q ++ PS I ++H Y KYFKM+KMG+P GA QKM DGV E LD DA + + A+ E K + KD P Y KYFKML+MG+ +GA Q M D VD+ LD L V E++GSA
Sbjct: 681 LQDDIKSVNLPQEGGSKDADPSDILLKDHEVYSKYFKMLKMGLPEGAVRQKMKADGVSEQALDLGGDAPVSMLAKPAAE---KSDIKLKDDPLYAKYFKMLKMGLPEGAVRQKMKADAVDERALDLGGDAL---VSELAGSA 816
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A024TTB1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTB1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.340e-19 Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 76 PSA-IEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAPDAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEAA 447
PSA + A A K+FK+ KMGMP KM +G D A++DAPD ++ + + +V P MVAAKDHP Y KYFK+++MGM + +G+D AILDTP+ALLP +++S A+A+
Sbjct: 1141 PSAGVRADACAALAKFFKLKKMGMPAAQIQLKMQSEGFDPALIDAPDTIV--NDDGKVPKAPSDMVAAKDHPTYAKYFKLMKMGMPMVQIQLKVSSEGLDPAILDTPDALLP---EDLSNQADAS 1260
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Match: A0A7S3HT31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HT31_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.530e-19 Identity = 52/137 (37.96%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 37 KTLSALQNKEETGPSAIEAREHPAYFKYFKMIKMGMPRGAALQKMVKDGVDEAILDAP-DAMIPLSAEEQVEGQPKGMVAAKDHPHYVKYFKMLRMGMAQGAALQAMLRDGVDQAILDTPEALLPLPVDEVSGSAEA 444
KT ++ +EET + EHP Y K+FKM+K+G+P+ A QKM ++G+D +ILD P D IPL+ ++ VA +HP YVK+FKML++G+ M ++G+D A+LD A + +P+++ +AE+
Sbjct: 119 KTDASADKEEET----VLVSEHPKYVKFFKMLKIGLPKDAVKQKMTQEGLDPSILDKPADEKIPLNDKKPDAASEGEKVAISEHPKYVKFFKMLKVGLPAQMVKSKMEQEGLDPAMLDKDPATM-IPLNDAPAAAES 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131957.2295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig131957.2295.1 >prot_H-elongata_contig131957.2295.1 ID=prot_H-elongata_contig131957.2295.1|Name=mRNA_H-elongata_contig131957.2295.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp AAASAEALTKDLKTLSALQNKEETGPSAIEAREHPAYFKYFKMIKMGMPRback to top mRNA from alignment at H-elongata_contig131957:1135..1710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig131957.2295.1 ID=mRNA_H-elongata_contig131957.2295.1|Name=mRNA_H-elongata_contig131957.2295.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=576bp|location=Sequence derived from alignment at H-elongata_contig131957:1135..1710- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig131957:1135..1710- >mRNA_H-elongata_contig131957.2295.1 ID=mRNA_H-elongata_contig131957.2295.1|Name=mRNA_H-elongata_contig131957.2295.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at H-elongata_contig131957:1135..1710- (Himanthalia elongata Himel1 dioecious)back to top |