prot_H-elongata_contig131904.2293.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131904.2293.1
Unique Nameprot_H-elongata_contig131904.2293.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig131904.2293.1 vs. uniprot
Match: D7FXN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN6_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 3.470e-29
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 NLGADSEPLTQWICKQLAMGRGRGQGVRGAVQALCVLLRHDDARMSFARHGGVGYLTKIIRMQ 63
            NL ADSEPLT WICKQL+MGRGRGQ VRGAVQALCVLLR+D AR+SF RHGGV YLTKIIRMQ
Sbjct:  158 NLDADSEPLTAWICKQLSMGRGRGQSVRGAVQALCVLLRNDTARISFGRHGGVAYLTKIIRMQ 220          
BLAST of mRNA_H-elongata_contig131904.2293.1 vs. uniprot
Match: A0A6H5LCE7_9PHAE (V-ATPase_H_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE7_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.910e-28
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 NLGADSEPLTQWICKQLAMGRGRGQGVRGAVQALCVLLRHDDARMSFARHGGVGYLTKIIRMQ 63
            NL ADSEPLT WIC+QL+MGRGRGQ VRGAVQALCVLLR+D AR+SF RHGGV YLTKIIRMQ
Sbjct:  228 NLNADSEPLTAWICQQLSMGRGRGQSVRGAVQALCVLLRNDTARISFGRHGGVAYLTKIIRMQ 290          
BLAST of mRNA_H-elongata_contig131904.2293.1 vs. uniprot
Match: A0A7S2H8Z8_9STRA (V-type proton ATPase subunit H n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H8Z8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.890e-10
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 NLGADSEPLTQWICKQLAMGRGRGQGVRGAVQALCVLLRHDDARMSFARHGGVGYLTKIIRMQ 63
            N  +  E    W+C+QL   R     +R AV AL +LLR ++AR  F +HGG+GYLTK+++ Q
Sbjct:  157 NSKSPMETFINWLCEQLGNSRKNNPSMRAAVLALTILLRRNEARNLFGQHGGIGYLTKLLKNQ 219          
BLAST of mRNA_H-elongata_contig131904.2293.1 vs. uniprot
Match: W7T214_9STRA (V-type h+-transporting atpase 54 kd subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T214_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 2.420e-5
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    2 LGADSEPLTQWICKQLAMGRGRGQGVRGAVQALCVLLRHDDARMSFARHGGVGYLTKIIRMQ 63
            +  D +     IC +L+    R   ++  V  L +LLR + +R+ F  HGGVG+LTK++++Q
Sbjct:    1 MDGDLDGFVSRICSELS--NSRNPSIKVIVSPLALLLRTEKSRLVFGAHGGVGFLTKLLKLQ 60          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131904.2293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXN6_ECTSI3.470e-2985.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCE7_9PHAE4.910e-2884.13V-ATPase_H_C domain-containing protein n=1 Tax=Ect... [more]
A0A7S2H8Z8_9STRA7.890e-1042.86V-type proton ATPase subunit H n=1 Tax=Dictyocha s... [more]
W7T214_9STRA2.420e-533.87V-type h+-transporting atpase 54 kd subunit n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131904contigH-elongata_contig131904:241..429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131904.2293.1mRNA_H-elongata_contig131904.2293.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131904 241..429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131904.2293.1 ID=prot_H-elongata_contig131904.2293.1|Name=mRNA_H-elongata_contig131904.2293.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
NLGADSEPLTQWICKQLAMGRGRGQGVRGAVQALCVLLRHDDARMSFARH
GGVGYLTKIIRMQ
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