prot_H-elongata_contig13186.2288.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13186.2288.1
Unique Nameprot_H-elongata_contig13186.2288.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length272
Homology
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.150e-84
Identity = 152/226 (67.26%), Postives = 174/226 (76.99%), Query Frame = 0
Query:   50 MSKDQRAGLKKVKSASQWVVDKLAASAETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGY----KGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQAESINVDKVCDVDTVLTLDSGSRREDPFRSHR 271
            MSKD RAGLKKVKSAS+WV++KL AS ET TKFVVFAHHK VLDRLQEAFEV GT G       + ++  DD     F+CLRIDG VPTA+R + +     FNT+ RCRVL+VSITAGGQGLDFTAASNVVFVELPESP+WLRQAEDRLHRR+Q+KSVNVYL VLP GS+DD RWL LSEKLTTQTSV+NG   AE+I+VD+V D  + L  D  +RR    R  R
Sbjct:    1 MSKDHRAGLKKVKSASEWVIEKLIASEETLTKFVVFAHHKTVLDRLQEAFEVQGTRGNTCPFTPRAANDSDDASVGAFTCLRIDGSVPTALRASRLSE---FNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQEKSVNVYLTVLPTGSHDDTRWLSLSEKLTTQTSVMNGTLYAENIDVDRVVDAGSTLDHDGPTRRPSRRRGRR 223          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: W7TN96_9STRA (Zinc finger ran-binding domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN96_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.370e-28
Identity = 79/215 (36.74%), Postives = 106/215 (49.30%), Query Frame = 0
Query:   49 GMSKDQRAGLKKVKSASQWVVDKL---------------AASAETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQAESINVDKV 248
            G S+  + G  K+    +W+ D+L               A       KFV+FAHH  VL  L              +  + H       +S ++I G  P   RQ  +     F  D  CR+ L+ ITAGG GLD  AAS  VFVELP SP WLRQAEDRLHRR Q + V +Y +VLP GS +D  W  +   L   T+V+N   +AE ++V++V
Sbjct:  726 GQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFH-------WSQVQIQGSTPPETRQDLVKR---FKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAEELDVNRV 930          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A5J4Y511_9CHLO (SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y511_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 2.010e-27
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 0
Query:   50 MSKDQRAGLKKVKSASQWVVDKLAAS--------------AETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSV 233
            MSK  + GL K+ +  +W+++ L A+              AE   KF++FAHHK V+ +L  A E     G+G +G          G   +RIDGE  +  R+   L    F  D   R  L+SITA G GLDF+AAS VVFVELP+  + +RQAEDR HR  Q  SVNVY +V   G++D+ RW  LS  L   T+V
Sbjct:  633 MSKSHQTGLAKLPNGLEWLINALGAARQGSKGGVESQGEGAEPAPKFLIFAHHKDVMSKLANALEG----GQGKEGWG--------GVPYVRIDGETDSRDRRTACLQ---FKEDPSIRAALLSITAAGTGLDFSAASAVVFVELPQEVALVRQAEDRAHRHGQKLSVNVYFLVAK-GTSDEHRWQALSRSLERVTAV 814          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A0K9NWB6_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NWB6_ZOSMR)

HSP 1 Score: 118 bits (295), Expect = 2.940e-26
Identity = 72/208 (34.62%), Postives = 107/208 (51.44%), Query Frame = 0
Query:   53 DQRAGLKKVKSASQWVVDKLAAS--------AETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDV 251
            ++  G+ K+    +W+ +   AS         +   K ++FAHH  VLD +QE                     CG     +RIDG   +  R+ ++   + F T    ++ L+ IT G  GLDF++A NVVFVELP S S + QAEDR+HRR Q  SVN+Y+     G++D+  WL L++ L   +S++NG   A   I VD VC+V
Sbjct:  474 NEELGIAKLHKFGEWLYNHSIASYMDVILDVEQPSQKMLIFAHHIKVLDGIQELI-------------------CGKQIKFVRIDGSTSSTDRKTSL---ELFRTSNEVKIALIGITVGAAGLDFSSAQNVVFVELPHSASMMLQAEDRVHRRGQTNSVNIYIFC-GKGTSDESHWLHLNKSLYRVSSMMNGKVDAIREIEVDGVCEV 658          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A1Y1HPT8_KLENI (Helicase C-terminal domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HPT8_KLENI)

HSP 1 Score: 113 bits (283), Expect = 4.160e-26
Identity = 77/204 (37.75%), Postives = 106/204 (51.96%), Query Frame = 0
Query:   54 QRAGLKKVKSASQWVVDKLAAS------AETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCD 250
            Q+ GL K++   +W+ + +  +      AE   K ++FAHH  +LDR++                     DCG  +  +R DG      RQA +   DF + D   RV +V +TAGG GLDF+AA  VVF ELP S + L  A+DR HRR Q  +VNVYL      + D+  W+RLSE L   T+VVNG   A   I+VD + D
Sbjct:   49 QQIGLAKLRGVREWLGNNVGLTPQKEEGAEDVPKMIIFAHHIELLDRIERYVH-----------------DCGVDY--VRFDGSTLGRDRQAAV--QDFKHRD-EIRVAIVGVTAGGVGLDFSAAQTVVFAELPTSSADLMHAKDRAHRRGQSSAVNVYLFCAK-DTGDETSWMRLSESLERVTTVVNGSENAVRGIHVDAIED 229          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A6P4ACM7_ZIZJJ (DNA annealing helicase and endonuclease ZRANB3 isoform X1 n=5 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4ACM7_ZIZJJ)

HSP 1 Score: 117 bits (292), Expect = 7.480e-26
Identity = 91/276 (32.97%), Postives = 140/276 (50.72%), Query Frame = 0
Query:    1 MPCYRRIVVRVVPHAEEL---KAALQAAGG-------FEPDPDG----DNGERSTRQTRWAGGMSKDQRAGLKKVKSASQWV-VDKLAASAETRT-KFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDVDTVLTLDS 259
            +P  RR +V+++    ++   KAA+    G        E D D     D+GE   R     G +S +Q  G+ K     +W+ +  L A +++ + K ++FAHH  VLD +QE                     C  G   +RIDG      RQ+ +L+   F + T+ +V ++ ITAGG GLDF++A +VVF+ELP+SPS + QAEDR HRR Q  +VN+Y+      + DD  W  L++ L   +S  NG   A + I V+ V  ++T   +DS
Sbjct:  446 LPPKRRQIVQLLLKRSDIVSAKAAIGVVNGDASFRSVLEDDTDNLDVSDDGEGCCR----VGELS-NQELGIAKRSGFCEWLSIHSLIADSDSNSNKMIIFAHHHKVLDGVQEFI-------------------CEKGIGFVRIDGNTLARDRQSAVLS---FQSLTKVKVAIIGITAGGVGLDFSSAQHVVFLELPQSPSLMLQAEDRAHRRGQKNAVNIYVFCAK-DTMDDSHWQNLNKSLRRVSSATNGKYDAIQEIEVEGVSFLETFDRVDS 693          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A394D9Z4_LUPAN (Uncharacterized protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A394D9Z4_LUPAN)

HSP 1 Score: 116 bits (290), Expect = 1.350e-25
Identity = 80/261 (30.65%), Postives = 126/261 (48.28%), Query Frame = 0
Query:    1 MPCYRRIVVRVVPHAEELKAALQAAGGFEPDPDGDNGERSTRQTRWAGGMSKDQRAGLKKVKSASQWV-VDKLAASAETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDVDTVLTLDS 259
            +P  RR ++R++    ++ AA  A G  + D    + +          G    Q  G+ K+    +W+ +  L A  E  +K ++FAHH  VLD LQE                     C  G   +RIDG      RQ+ +++   F +    ++ ++ I A G GLDF+ A +VVF+ELP+SPS + QAEDR HRR Q  +VNVY+      + D++ W  L++ L   +S  +G   A + I V+ +  +D  L  DS
Sbjct:  422 LPPKRRQIIRLLLKRSDIVAAKNAVGALKFDGSESSSDEDFEILDAPDGKLSYQELGIAKISGFREWLSLHPLIAEPENASKMIIFAHHHKVLDGLQEFV-------------------CEKGIGFVRIDGTTLARDRQSAVVS---FRSSPEVKIAIIGILAAGFGLDFSTAQDVVFLELPQSPSVMLQAEDRAHRRGQTNAVNVYIFSAK-DTLDELLWKNLNKSLHRVSSTTDGKYDAMKEIEVEGISYLDGSLKADS 659          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A444WWE9_ARAHY (Helicase C-terminal domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444WWE9_ARAHY)

HSP 1 Score: 115 bits (289), Expect = 1.630e-25
Identity = 79/266 (29.70%), Postives = 130/266 (48.87%), Query Frame = 0
Query:    1 MPCYRRIVVRVVPHAEELKAALQAAGGFE-PDPDGDNGERSTRQTRWAGGMSKDQRAGLKKVKSASQWV-VDKLAASAETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDVDTVLTLDSGSRR 263
            +P  RR ++R++    ++ AA  A G     DP+  + +     +    G    Q  G+ K+    +W+ +  L A +E   K ++FAHH  VLD +QE                     C  G   +RIDG      RQ+ ++A   F + +  ++ ++ I A G GLDF+ A +VVF+ELP+ P+ + QAEDR HRR Q  +VNVY+      ++D++RW  L++ L   +   +G   A + I VD +  ++T    DS   +
Sbjct:   68 LPPKRRQIIRLLLKKSDIVAAKTAVGALTIDDPERASEDMPLGNSDEVDGDLSVQELGIAKLSGFREWLSLHPLIAGSENSKKMIIFAHHHKVLDGVQEFI-------------------CEKGVGFVRIDGSTLPRDRQSAVVA---FRSSSEVKIAIIGILAAGFGLDFSTAQDVVFLELPQCPTVMLQAEDRAHRRGQKNAVNVYIFCAK-DTSDELRWKNLNKSLHRVSKTTDGKYDAMKEIVVDDISYLETYFKTDSSDEQ 310          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A6P4C3Q4_ARADU (DNA annealing helicase and endonuclease ZRANB3 n=5 Tax=Arachis TaxID=3817 RepID=A0A6P4C3Q4_ARADU)

HSP 1 Score: 115 bits (289), Expect = 1.820e-25
Identity = 79/266 (29.70%), Postives = 130/266 (48.87%), Query Frame = 0
Query:    1 MPCYRRIVVRVVPHAEELKAALQAAGGFE-PDPDGDNGERSTRQTRWAGGMSKDQRAGLKKVKSASQWV-VDKLAASAETRTKFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDVDTVLTLDSGSRR 263
            +P  RR ++R++    ++ AA  A G     DP+  + +     +    G    Q  G+ K+    +W+ +  L A +E   K ++FAHH  VLD +QE                     C  G   +RIDG      RQ+ ++A   F + +  ++ ++ I A G GLDF+ A +VVF+ELP+ P+ + QAEDR HRR Q  +VNVY+      ++D++RW  L++ L   +   +G   A + I VD +  ++T    DS   +
Sbjct:  420 LPPKRRQIIRLLLKKSDIVAAKTAVGALTIDDPERASEDMPLGNSDEVDGDLSVQELGIAKLSGFREWLSLHPLIAGSENSKKMIIFAHHHKVLDGVQEFI-------------------CEKGVGFVRIDGSTLPRDRQSAVVA---FRSSSEVKIAIIGILAAGFGLDFSTAQDVVFLELPQCPTVMLQAEDRAHRRGQKNAVNVYIFCAK-DTSDELRWKNLNKSLHRVSKTTDGKYDAMKEIVVDDISYLETYFKTDSSDEQ 662          
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Match: A0A6P9E5V3_JUGRE (DNA annealing helicase and endonuclease ZRANB3-like isoform X1 n=23 Tax=Juglandaceae TaxID=16714 RepID=A0A6P9E5V3_JUGRE)

HSP 1 Score: 115 bits (288), Expect = 2.520e-25
Identity = 76/222 (34.23%), Postives = 112/222 (50.45%), Query Frame = 0
Query:   54 QRAGLKKVKSASQWV-VDKLAASAETRT---------KFVVFAHHKAVLDRLQEAFEVAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTDTRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQDKSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQA-ESINVDKVCDVDTVLTLDSGSRRE 264
            Q  G+ K+    +W+ +  L A +++           K ++FAHH  VLD +QE                     C  G S +RIDG      RQ+ +L+   F + T  +V ++ ITAGG GLDF++A NVVF+ELP+SPS + QAEDR HRR Q  +VN+Y+     G+ D+  W  L+  L   +S  NG   A + I VD V  ++T    D   + +
Sbjct:  493 QELGIAKLSGFREWLSIHPLVAESDSTEVLDLHFSSRKMIIFAHHHKVLDGIQEFV-------------------CEKGISFVRIDGNTLARDRQSAVLS---FKSSTEVKVAIIGITAGGVGLDFSSAQNVVFLELPKSPSLMLQAEDRAHRRGQTSAVNIYIFCAK-GTLDESHWSYLNRSLRHVSSTTNGKYDAIQEIQVDGVSYLETSDKTDGSCKNQ 691          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13186.2288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJH7_ECTSI1.150e-8467.26Chromatin remodeling complex subunit n=1 Tax=Ectoc... [more]
W7TN96_9STRA2.370e-2836.74Zinc finger ran-binding domain-containing protein ... [more]
A0A5J4Y511_9CHLO2.010e-2740.40SNF2 family DNA-dependent ATPase n=1 Tax=Trebouxia... [more]
A0A0K9NWB6_ZOSMR2.940e-2634.62Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]
A0A1Y1HPT8_KLENI4.160e-2637.75Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6P4ACM7_ZIZJJ7.480e-2632.97DNA annealing helicase and endonuclease ZRANB3 iso... [more]
A0A394D9Z4_LUPAN1.350e-2530.65Uncharacterized protein n=2 Tax=Lupinus TaxID=3869... [more]
A0A444WWE9_ARAHY1.630e-2529.70Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6P4C3Q4_ARADU1.820e-2529.70DNA annealing helicase and endonuclease ZRANB3 n=5... [more]
A0A6P9E5V3_JUGRE2.520e-2534.23DNA annealing helicase and endonuclease ZRANB3-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 99..198
e-value: 4.6E-8
score: 42.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 75..197
e-value: 4.2E-9
score: 36.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 68..249
score: 10.628
NoneNo IPR availableGENE3D3.40.50.300coord: 27..261
e-value: 8.3E-32
score: 112.5
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 54..256
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 66..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13186contigH-elongata_contig13186:222..3084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13186.2288.1mRNA_H-elongata_contig13186.2288.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13186 219..3084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13186.2288.1 ID=prot_H-elongata_contig13186.2288.1|Name=mRNA_H-elongata_contig13186.2288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=272bp
MPCYRRIVVRVVPHAEELKAALQAAGGFEPDPDGDNGERSTRQTRWAGGM
SKDQRAGLKKVKSASQWVVDKLAASAETRTKFVVFAHHKAVLDRLQEAFE
VAGTFGEGYKGSSSHDDDCGAGFSCLRIDGEVPTAVRQATILANDFFNTD
TRCRVLLVSITAGGQGLDFTAASNVVFVELPESPSWLRQAEDRLHRRKQD
KSVNVYLMVLPAGSNDDIRWLRLSEKLTTQTSVVNGVAQAESINVDKVCD
VDTVLTLDSGSRREDPFRSHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase