prot_H-elongata_contig131854.2286.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig131854.2286.1
Unique Nameprot_H-elongata_contig131854.2286.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
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BLAST of mRNA_H-elongata_contig131854.2286.1 vs. uniprot
Match: D7G6H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6H7_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.670e-14
Identity = 63/143 (44.06%), Postives = 77/143 (53.85%), Query Frame = 0 
Query:   13 DEEDTRR-SARWGVKPNSPPKLGV-----ALGNPLKAVGSSLKVVGQGATAAKDALYDVANAITTPGSLLPKLPEQQRDSSDQGEVECGLVSGGTSDGIIASGKSTG-------GGLVGALRVVGEGAVITKDAFWGTLDALG 142
            +EED R+ SARWGVKP SPPKL       +L NPL  VG SL+ VG G  A KDA+Y  A+A    GS+     EQ +  +D          GG    + A+   T        GG   ALR++  GAV  KDAFWG+LDALG
Sbjct:  124 EEEDVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAVYGAADAA---GSVA----EQVQGVADAAAAGKAPGDGGAMPQLAATASVTPVAPSNAPGGAKRALRLLVGGAVAAKDAFWGSLDALG 259
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BLAST of mRNA_H-elongata_contig131854.2286.1 vs. uniprot
Match: A0A6H5L8H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H1_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.870e-14
Identity = 63/146 (43.15%), Postives = 76/146 (52.05%), Query Frame = 0 
Query:   13 DEEDTRR-SARWGVKPNSPPKLGV-----ALGNPLKAVGSSLKVVGQGATAAKDALYDVANAITTPGSLLPKLPEQQRDSSDQGEVECGLVSGGTSDGIIASGKSTG-------GGLVGALRVVGEGAVITKDAFWGTLDALGYAA 145
            +EED R+ SARWGVKP SPPKL       +L NPL  VG SL+ VG G  A KDA Y  A+A    GS+     EQ +  +D          GG    + A+   T        GG   ALR++  GAV  KDAFWG+LD L  AA
Sbjct:  137 EEEDVRKKSARWGVKPPSPPKLPSIPDVRSLKNPLDGVGKSLRKVGSGVAAVKDAAYGAADAA---GSIA----EQVQGVADAAAAGKAAGDGGAMPQLAATASVTPVVPSNAPGGAKRALRLLVGGAVAAKDAFWGSLDTLSSAA 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131854.2286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6H7_ECTSI2.670e-1444.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8H1_9PHAE9.870e-1443.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig131854contigH-elongata_contig131854:143..1329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig131854.2286.1mRNA_H-elongata_contig131854.2286.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig131854 143..1329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig131854.2286.1 ID=prot_H-elongata_contig131854.2286.1|Name=mRNA_H-elongata_contig131854.2286.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
PSSQKSLEREERDEEDTRRSARWGVKPNSPPKLGVALGNPLKAVGSSLKV
VGQGATAAKDALYDVANAITTPGSLLPKLPEQQRDSSDQGEVECGLVSGG
TSDGIIASGKSTGGGLVGALRVVGEGAVITKDAFWGTLDALGYAADAVGK
APETTRSVAEGARAALQG
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