prot_H-elongata_contig1317.2285.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1317.2285.1
Unique Nameprot_H-elongata_contig1317.2285.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1603
Homology
BLAST of mRNA_H-elongata_contig1317.2285.1 vs. uniprot
Match: A0A6H5JU62_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU62_9PHAE)

HSP 1 Score: 759 bits (1960), Expect = 5.390e-238
Identity = 755/1791 (42.16%), Postives = 947/1791 (52.88%), Query Frame = 0
Query:    1 EIEEEFPALPFPSGCETQPKTL--PPKPREESPRTVTDA-----LDYASVAEKLVAGTAIXXXXXXXXXVSNAVMSPGQRSDFAK-DNFRRLSVLPGFRKGRRSGSKPNVDDGSLEPTKEGPHSASLRLCDTIR-GVTETKTKSIEIIGPLLSRPPALAPQPTPAAKSLPSQHAGATVATTALRKRLRERWFRLEAMKKAERQKEVAERSLMGVEDRESMEREVT-LGRRPGDRNDARGSNLVGIRPPYDDECDESVLPPRADCTTYGNREASIVGTVMSSGASGESTLSTRDVKFLSAAGAAAVKRAEATAIVSTASVVTLAPDVSDSAPSLSRPASNRPQKTTALSRDESREALRGRVPDLPGASANDDKRSTSDYSDLLEKGSGRGRAQEVARCPA------HVASEAGMAGTLNEQLVRTGGAVADSKDKLRRXXXXXXXXXXSLECVNLLLKQGSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAVLLSFGARPDEPDVDGKWSCQAPPPLRRITPVCQAAMNGQGELLMTMASSNQACRKGSNAMEPHLVTAAVPRQGGEG---RGSSTAKRRPLASSGRPLVASASISVGGVGE---LSALSPVHEAAAAGQVETLSLLLQLGVSFEERDSAAGMAGDTPLGRAVRCGRLDCVRVLLDAGAMVGRENTRXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGRSQGRLTSANGRVPAGARDNMLARRRSVPLEVALREGQLACAAVLIEGGARINIQALRMVKLEPSFAASDPGDRSLARGPRVKYAGSACAV---GGVGVGDMTARDAGV-TRLLALQASLLECQSSDVRHAADTASPDGGGLQEGGVLPDIDVSFGVLESVVAEDGALASALNLAPNSTAMFDCTPEVSQVFGKVGETAIERKAQAK----VECVGGRMAALGDCD---------------------------------------------------------------ALLTGQER--------------GSIPPGE------------LPSAAVTAATTASIMVNFTTGSRRPRATSVVRWGSARGDVLVRFWGPGTMAALVTHVYSGRPPDEIRVEGLGRLLAAAKSLQMPRLARQVEHLLSATVTEHRGSGRSAQLGDVARLLRGARALGARDLEKRCTLHLQANGGSPAVMKLRRQLDIPSLNASDVARGLARLKESGYLGSGPAHAWSSAGAVRKTSTSAAVEAAKRTVDLSLRKRAVDFDQLLPLLVDPPR----CMSTLSIGRHERAVLLTAALSDACLGRPSEAFAPRTKEEHERGIISSHAQEQ-HPLLRGRRQSCCDVLGA---------ASVPLASNFAAFSHGMGWLLETGAVADVVLVLPARGDVT--VEPSVMRSNG----------------GGATVVDMAEGKPLALGESPDSEK-----GRLEQRGASKKKADSDR----------RNRFLAHSVVLAARSEKFAAMLRFIRRQDDAIGRSCADD-----HDDDITEEANLVDRTNFLRDRSV-------DAAAGDESSGLESTTADGSLAVDSEPPRSPVCGGRPPNTWN---GRRPRRDPQPRELELHSPLLSPQSMVLFLEFLYTGVLDPGISVTELFELALIADEYLVPDLTLQAETLLVEYLV-----------THTVDGASHGFNSSSLLSIGQPGRDIREEDDTASTPLEALQLAASVGMRKLSVVAARAVLLRLDTVSRSEAFEASGMTKRELVVAALGA 1599
            E +E FPALP  SG    P  L  P +P    P  VT A     LDY+S+ ++L    A             A  S G     A+ D+F RLSVLP    GR   +KP     ++ P      S+ LR+ +    G   T       I  L S+ P L   P+  A +  S    A+  T ALR RLR+RWFRLEA +KA+RQ+E AER+LM  ED  ++    + LG   GD N    S   G+R    +  DE              R AS   T M+S                                                  + S P  N+ + +  +S   S  A    + +    +A+    +T   ++L  +  GR         PA      + A +AGMAG LN+ LVR+GG  AD KDKLRR          SLECV+LLLKQG+RLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                            ELLMTMA+SNQA +  + +   +    ++    G+    RG++T KRR L S   P  ++++ + GG G    + ALSP+HEAAA+GQ ETLSLLLQLGVS EERD+AAG+ GDTPLGRAVR G++DC R+LLDAGAMVGREN RXXXXXXXXXXXXXXXXXXXXXXXX   DGG+S GRLT A+GR P G R+ M+ARRR  PLE+ALREGQLACAA LIEGGA IN + LR VKL+PS       D+S+A+G +V YAG++      GG   G+  A  AG     L LQA +L+  S +V   +D+A PDGGGL+   V P+ D     L+ V  +        +LA    +            G   ETA E +A  +    VE VGG    LG+CD                                                               A   G+E               G  PPG+             PS +  A   A+     T  +    A  V+ WG  RG+V VRFWG GTM+A+V HVY+G+PP  +  +GLGRLL A+ SL+M RL RQVEHLLS  +   +G  RS Q  + ARLLR AR L A DLEKRCTL++QANG  PAVMKLRR+L +PSLN  DV RGLARL  SGYLGSGPA+AWSS+GAV  +S SA V AAK  VDLSLRKRAVDFDQL+PLL+D  R    C STLSIGR ERAVLLTAAL+DAC   P E  +PR++ +    + +   +    P LRG    CCD +            +VPL SN +AFSHGMGWLL TG VADVVLVLP +   +  + P+ +  +G                GG   V  +E    +   + DS       G ++  G+ +   DS +           +RFLAHS+VLA+RSEKF+AMLRF++ QD    R+ AD       DDDI  +A+  +R +  R+          +AA  ++   +++   DG +   S+PPR       PP+       RRPRR+  PRE+ELHSP+L+PQS+ LFLEFLYTGVLD  +S  EL ELALIADEYLVPDL  QAE LLVE LV           T + +   + F+S++    G      + E+DT S PLE LQL  S+ +  LS  AARAVLL+L+ VSRSEAFE S M+KRELV+AAL A
Sbjct:  350 EDDEAFPALPPASGPRNTPGELLAPVQP----PPVVTAAAGHVALDYSSLKDRLAIEAAAA--------AKAAAESSGALGGTAEGDDFSRLSVLPSVGSGRGGEAKPGSTSSAILPV-----SSDLRVLEGCSPGSMGTDGDVSRGISALQSQSPKLPSPPSRQAVAANSVTRCASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSAASVLGWNGGDGN--HSSAEEGMRSGSGENHDEGEAK---------GRRASSSHTAMTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPMGTNTSSPL-NQNECSRGISAIASIPAAEAELIEA-AETASCRPETTQVGAELSGEDGGRASCGGGGGLPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECVSLLLKQGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXELLMTMANSNQAWKSSAPSSRDNSAPYSMVVMSGQASRARGNATGKRRALQSPMNPGSSNSARANGGKGNGVPVPALSPLHEAAASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCARILLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXAPLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGAHINERTLRAVKLQPS-GTEVTEDKSVAQGRQVIYAGTSPGESRRGGGWSGNGGAGSAGTPATTLPLQADILQRLSPEVPEISDSAPPDGGGLE---VDPEYDCDM--LDGVSVDIRETWRDKDLARREPSA-----------GGSKETAAEGEAATRPGRPVEYVGGLRPTLGECDIDLVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPAARGGNYSKRQPVPGASEVAAAAADGREMDQRTRSRDVHHLLAGHDPPGQGRSATSEHQRQTSPSISEAAVAAAAFAATATVENTAWWAPPVIDWGPGRGEVSVRFWGAGTMSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLSDRLAPQKGKARSLQHAEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNTLDVTRGLARLSNSGYLGSGPAYAWSSSGAVSTSSASATVAAAKLAVDLSLRKRAVDFDQLVPLLLDTVRFITWCTSTLSIGRQERAVLLTAALADAC---PQE--SPRSQNDAPDPLAAPQRRRPIPPNLRG----CCDAVRCDGDRWNADRPAVPLVSNVSAFSHGMGWLLRTGTVADVVLVLPEQPSHSDAMPPATVIEDGEEDEKNYSGNRENLSPGGRVGVQSSERGAHSADSAVDSPARVSPGGPVKDEGSGRPATDSRKMEGTTKDQLVNSRFLAHSMVLASRSEKFSAMLRFVQGQD-GNSRTYADSVDGSSTDDDIFTDADTPEREHRNREEPPWGDVEQGEAAGHNQGEAVDNIGKDGEV---SQPPRIDSRRPSPPSDRRCHCRRRPRRNTAPREMELHSPILTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDLIRQAEALLVECLVRRGDVRYSLQVTASRNAGDYSFDSTTFN--GTTTVQSKREEDTESAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFEQSSMSKRELVMAALEA 2066          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1317.2285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JU62_9PHAE5.390e-23842.16BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 188..208
NoneNo IPR availableGENE3D3.30.710.10coord: 971..1088
e-value: 4.1E-5
score: 25.6
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 371..474
coord: 454..564
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 371..474
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 616..767
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 580..720
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 616..767
coord: 454..564
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 580..720
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 452..481
e-value: 0.12
score: 21.5
coord: 683..712
e-value: 0.17
score: 21.0
coord: 419..448
e-value: 9.2E-4
score: 28.5
coord: 485..514
e-value: 2.1
score: 17.3
coord: 650..679
e-value: 0.17
score: 20.9
coord: 613..642
e-value: 3.2
score: 16.8
coord: 738..767
e-value: 30.0
score: 13.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 452..484
score: 9.831
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 419..451
score: 12.743
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 683..715
score: 10.205
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 650..682
score: 10.472
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 485..517
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 613..645
score: 10.579
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 373..587
e-value: 3.5E-33
score: 117.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 608..776
e-value: 2.5E-27
score: 97.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 380..521
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 615..768
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 619..708
e-value: 6.5E-10
score: 39.5
coord: 424..513
e-value: 6.6E-13
score: 49.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 371..770
score: 47.774
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 1335..1508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1317contigH-elongata_contig1317:2201..13327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1317.2285.1mRNA_H-elongata_contig1317.2285.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1317 2201..13327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1317.2285.1 ID=prot_H-elongata_contig1317.2285.1|Name=mRNA_H-elongata_contig1317.2285.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1603bp
EIEEEFPALPFPSGCETQPKTLPPKPREESPRTVTDALDYASVAEKLVAG
TAIAGAATIGGAVSNAVMSPGQRSDFAKDNFRRLSVLPGFRKGRRSGSKP
NVDDGSLEPTKEGPHSASLRLCDTIRGVTETKTKSIEIIGPLLSRPPALA
PQPTPAAKSLPSQHAGATVATTALRKRLRERWFRLEAMKKAERQKEVAER
SLMGVEDRESMEREVTLGRRPGDRNDARGSNLVGIRPPYDDECDESVLPP
RADCTTYGNREASIVGTVMSSGASGESTLSTRDVKFLSAAGAAAVKRAEA
TAIVSTASVVTLAPDVSDSAPSLSRPASNRPQKTTALSRDESREALRGRV
PDLPGASANDDKRSTSDYSDLLEKGSGRGRAQEVARCPAHVASEAGMAGT
LNEQLVRTGGAVADSKDKLRRTPLHLASEAGSLECVNLLLKQGSRLDQRD
RWRETPLHKAARSGSADVVKALCAARMKVNVRNRHRETPLLLAVRANSAE
ATAVLLSFGARPDEPDVDGKWSCQAPPPLRRITPVCQAAMNGQGELLMTM
ASSNQACRKGSNAMEPHLVTAAVPRQGGEGRGSSTAKRRPLASSGRPLVA
SASISVGGVGELSALSPVHEAAAAGQVETLSLLLQLGVSFEERDSAAGMA
GDTPLGRAVRCGRLDCVRVLLDAGAMVGRENTRGETPLVIAIRAGQASAV
ELLVRRGAAPDGGRSQGRLTSANGRVPAGARDNMLARRRSVPLEVALREG
QLACAAVLIEGGARINIQALRMVKLEPSFAASDPGDRSLARGPRVKYAGS
ACAVGGVGVGDMTARDAGVTRLLALQASLLECQSSDVRHAADTASPDGGG
LQEGGVLPDIDVSFGVLESVVAEDGALASALNLAPNSTAMFDCTPEVSQV
FGKVGETAIERKAQAKVECVGGRMAALGDCDALLTGQERGSIPPGELPSA
AVTAATTASIMVNFTTGSRRPRATSVVRWGSARGDVLVRFWGPGTMAALV
THVYSGRPPDEIRVEGLGRLLAAAKSLQMPRLARQVEHLLSATVTEHRGS
GRSAQLGDVARLLRGARALGARDLEKRCTLHLQANGGSPAVMKLRRQLDI
PSLNASDVARGLARLKESGYLGSGPAHAWSSAGAVRKTSTSAAVEAAKRT
VDLSLRKRAVDFDQLLPLLVDPPRCMSTLSIGRHERAVLLTAALSDACLG
RPSEAFAPRTKEEHERGIISSHAQEQHPLLRGRRQSCCDVLGAASVPLAS
NFAAFSHGMGWLLETGAVADVVLVLPARGDVTVEPSVMRSNGGGATVVDM
AEGKPLALGESPDSEKGRLEQRGASKKKADSDRRNRFLAHSVVLAARSEK
FAAMLRFIRRQDDAIGRSCADDHDDDITEEANLVDRTNFLRDRSVDAAAG
DESSGLESTTADGSLAVDSEPPRSPVCGGRPPNTWNGRRPRRDPQPRELE
LHSPLLSPQSMVLFLEFLYTGVLDPGISVTELFELALIADEYLVPDLTLQ
AETLLVEYLVTHTVDGASHGFNSSSLLSIGQPGRDIREEDDTASTPLEAL
QLAASVGMRKLSVVAARAVLLRLDTVSRSEAFEASGMTKRELVVAALGAA
HA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR011333SKP1/BTB/POZ_sf