mRNA_H-elongata_contig13146.2269.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13146.2269.1
Unique NamemRNA_H-elongata_contig13146.2269.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: D7FJ18_ECTSI (CCR4-NOT transcription complex subunit 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ18_ECTSI)

HSP 1 Score: 761 bits (1964), Expect = 1.080e-269
Identity = 392/435 (90.11%), Postives = 402/435 (92.41%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEVGSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            DEDDILE+VAQKFHR FTR+DHFKVGCA+CILLCDNLLT TQRVVSFSILCDLYRN+ NGTNPFLPFFLEAIE GTDPVE+QYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAV VPDLSALRQLYSEKNPAVPSLRTAGVR VL DP  S  EVGSWLP RPEEQVGRA GGA LR G+  K  A  PI+PLTLD M LS G  GGSLSLASFEPEFMRPVPP+LPI DSEVMWLNPDYAP LLWDTSMGQDSSKGAEVRDVMAKAF  PLLP QQQQVL+ELQ DARLVYHCGLTP KLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNM+MSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 DEDDILENVAQKFHRTFTRNDHFKVGCALCILLCDNLLTHTQRVVSFSILCDLYRNDANGTNPFLPFFLEAIEKGTDPVERQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVEVPDLSALRQLYSEKNPAVPSLRTAGVRPVLADPSESSNEVGSWLPPRPEEQVGRAPGGAALRGGVGGKREAPTPIQPLTLDDMRLSKGGRGGSLSLASFEPEFMRPVPPMLPIADSEVMWLNPDYAPRLLWDTSMGQDSSKGAEVRDVMAKAFKGPLLPTQQQQVLSELQGDARLVYHCGLTPFKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 450          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A2D4BNE6_PYTIN (CCR4-NOT transcription complex subunit 11 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE6_PYTIN)

HSP 1 Score: 508 bits (1307), Expect = 1.990e-170
Identity = 276/447 (61.74%), Postives = 334/447 (74.72%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVP--DLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEE---VGSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGAWG-------GSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            ++D  LE V+  F R FT++DHFKVGC +CILL DNLLT +QR+V FSILCDLYRNE   TNPFLP FLEA+E GTDP E ++LVHLL S P+NR +++++A  +++E     ++   +P  DL ALR++Y EK P VP LR AG+R V+ D  +  +E     + +   P E              +P         + LT+++M LS  A G       GSLSL  FEP+FMR  PP++    +E++WLNPDY P+LLWD +M +DSS G E+R++MA AF  P +P QQQ+VL +L+AD +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 EDDKPLEQVSSAFSRTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILCDLYRNEAASTNPFLPVFLEALEKGTDPCETKFLVHLLSSTPSNRETSKRSAKTILSELRANSSQ---IPPFDLEALRKVYKEKTPPVPQLRGAGIRNVVTDSELDLQEHLNTSANVHVPPNE---------VCMLNVPCA-------EELTIEEMGLSLDAAGAAGAPSAGSLSLQGFEPKFMRLPPPIMEPDMTELIWLNPDYCPTLLWDGTMFEDSSHGMELRELMAXAFVGPXIPSQQQKVLADLEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 443          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A8K1CP59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP59_PYTOL)

HSP 1 Score: 498 bits (1282), Expect = 9.330e-167
Identity = 267/434 (61.52%), Postives = 324/434 (74.65%), Query Frame = 1
Query:   16 LESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEV---GSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLS-DGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            LE V   F R FT++DHFKVGC +CILL DNLLT +QR+V  SIL DLYR+E  GTNPFLP F E +E G+D  EK++++HLL +P  NR S++K A  ++AE+    +    V D+ AL+  Y E+ PAVP  R AG+R V+ D  +  +E    G+ +   P E                V    V   + L++++M L+ +     SLSL SFEP FMR  PP++    +E++WLNPDY P++LWD++M +DSS G E+R++MAKAF  PL+P QQQ+VL EL+AD +LVYHC LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   21 LEQVGSSFARTFTKNDHFKVGCTICILLQDNLLTSSQRIVGLSILSDLYRSENTGTNPFLPVFFEVLEKGSDLSEKRFVLHLLSTPSANRESSKKGAKTLLAEFRANASPVAQV-DIDALKNAYKERTPAVPQFRAAGMRNVVTDTELDLQEQLNNGANVHIPPNE----------------VSALNVPSFEELSIEEMGLTGENGAPASLSLLSFEPSFMRLPPPIMEPEMTELIWLNPDYCPTVLWDSTMFEDSSHGLELRELMAKAFVGPLIPSQQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 437          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: K3XBZ3_GLOUD (CCR4-NOT transcription complex subunit 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBZ3_GLOUD)

HSP 1 Score: 483 bits (1244), Expect = 4.500e-161
Identity = 267/438 (60.96%), Postives = 324/438 (73.97%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEV--GSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCL-SDGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            ++D  LE+V   F + +T++DHFKVGC +CILL DNLLT +QRVV FSIL DLYRNE  GTNPFLP FLEA+E G+D  EK++LV LL + P+ ++  +K A  VI E   +P       D+   R+ Y+EK PAVP  R AGVR V+ D  +  +E       P  P  +V   +        LP         + L+L++M L S+G   G LSL SFEP+FMR  PP+L    +E++WLNPDY P++LW+++M  DSS G E+R++M KAF  PL+P  Q +VL+EL+ + +LVY C LTP +LPDLVENNPMIAI+CLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 EDDKPLETVMSSFLKTYTKNDHFKVGCTICILLQDNLLTSSQRVVGFSILSDLYRNESAGTNPFLPVFLEALEKGSDISEKKFLVLLLSAAPSTKDMNKKTAKAVITELRQSPVPLQF--DIEGFRKAYAEKTPAVPQFRAAGVRNVVTDTELDLQEHLNNGASPHVPPNEVSSLN--------LPC-------FEALSLEEMSLISEGDASGPLSLLSFEPKFMRLPPPILEPDMTELIWLNPDYCPTMLWNSTM-LDSSHGMEIRELMLKAFQTPLIPSLQAKVLDELEVNPKLVYQCSLTPQRLPDLVENNPMIAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 435          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: H3H0V6_PHYRM (CCR4-NOT transcription complex subunit 11 n=30 Tax=Peronosporaceae TaxID=4777 RepID=H3H0V6_PHYRM)

HSP 1 Score: 483 bits (1243), Expect = 1.270e-160
Identity = 269/458 (58.73%), Postives = 326/458 (71.18%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEV---GSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGA--------------------WGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            ++D  LE VA  F   FT++DHFKVGC +CILL DNLLT +QR+V FSIL DLYRNE   TNPFLP FL+A+E G+D  EK+ +VHLL +    R+S++K A Q++AE+   P++ V   D+ A+R  Y E+ P+VP  R AG+R V+ D     +E    G+ L   P E              LP         + L+L++M L   A                      GSLSL SFEP FMR  PP+L    +E++WLNPDY P+LLWD++M  DS+ G  +R++M +AF +PL+P  QQ+VL EL+AD +LVYHC LTP +LPDLVENNPM+AI+CLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 EDDKPLEQVASMFLHTFTKNDHFKVGCTICILLQDNLLTSSQRIVGFSILSDLYRNEGTTTNPFLPVFLDALEKGSDLCEKKLIVHLLTATGATRDSSKKAAKQLMAEFRANPSQPVQF-DVEAMRNSYLERTPSVPQFRAAGIRNVVTDTEFDLQEHVNNGANLQVPPNE---------VSSLNLPC-------FEALSLEEMSLLSDAEASXXXXXXXXXXXXXXXXXXAGSLSLLSFEPTFMRLPPPILEPDMTELIWLNPDYCPTLLWDSTM-LDSTHGIALRELMLRAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAIDCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 455          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A484EAT0_BRELC (CCR4-NOT transcription complex subunit 11 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAT0_BRELC)

HSP 1 Score: 473 bits (1217), Expect = 9.540e-157
Identity = 267/456 (58.55%), Postives = 326/456 (71.49%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEV---GSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCL------SDGAWG------------GSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            ++D  LE V   F R FT++DHFKVGC +CILL DNLLT +QR+VSFSILCDLYR+E   TNPFL  F++A+E G+D  E+ ++VHLL +    R+S++K+A Q +A++   P+  + + D+ ALRQ Y E+ P VP  R AG+R V+ D     +E    G+ L   P E              LP         + L+L++M L      S G+ G            GSLSL SFEP+FMR  P +L    +E +WLNPDY P+LLWD++M  DS+    +R++M  AF +PL+P  QQ+VL EL+AD +LVYHC LTP +LPDLVENNPM+AI CLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 EDDKPLEQVTSLFLRTFTKNDHFKVGCTICILLQDNLLTSSQRIVSFSILCDLYRSEGTTTNPFLLVFVDALEKGSDLCEQNFIVHLLTTSGAPRDSSKKSAKQWMADFRTNPSPPLHI-DVEALRQNYLERTPLVPQFRAAGIRNVVTDSEFDLQEHVNNGANLQVPPNE---------VSSLNLPCS-------EALSLEEMSLLSDADVSSGSHGTASSSAASASCTGSLSLLSFEPKFMRLPPSILEPDMTEFIWLNPDYCPTLLWDSTM-LDSTHNIALRELMTCAFQKPLVPSLQQKVLAELEADPKLVYHCSLTPQRLPDLVENNPMLAINCLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 453          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: F0W6B0_9STRA (CCR4-NOT transcription complex subunit 11 n=2 Tax=Albugo TaxID=65356 RepID=F0W6B0_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 2.130e-152
Identity = 259/437 (59.27%), Postives = 310/437 (70.94%), Query Frame = 1
Query:   16 LESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNE-PNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEV---GSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGAWG---GSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            LE V   F + +T++DHF++GC + ILL DNLLT  QR + FSIL DLYRNE  +  NPFLP FL A E G D  EK++L HLL S  ++R   +K+A  V+ E+     + V   D+  L+  Y E+ PAVP LR +G+R V+ D  +  +E    G+ L   P E            A +P        +   T+++      A G   G LSL SFEP FMRP P +L    SE++WLNPDY PS+LWD +M +D+S   E+RD+M+KAF  PL+P  QQ+VL EL AD ++VYH  LTP +LPDLVENNPMIAIECLLKLMSS+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   85 LEQVTNAFLKTYTKNDHFRIGCIVSILLQDNLLTSAQRFIGFSILFDLYRNEGSHAINPFLPIFLNAYEKGNDVYEKKFLSHLLSSA-SSRELNKKSANAVLQEFRSDTTQTVHAIDVDKLQAWYQERTPAVPQLRASGIRNVIADSELDYQEHMNNGNCLQLAPNE---------VSLANIPC-------LDEWTMEEFSEEKDASGKTNGYLSLLSFEPPFMRPPPSVLEPEMSELIWLNPDYCPSVLWDDTMFEDASHELELRDLMSKAFLNPLIPSHQQKVLAELDADPKIVYHSALTPQRLPDLVENNPMIAIECLLKLMSSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 504          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A836CN98_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN98_9STRA)

HSP 1 Score: 449 bits (1156), Expect = 1.260e-147
Identity = 254/449 (56.57%), Postives = 307/449 (68.37%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTN-----RNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPA-----VPSLRTAGVRLVLPDPVVSGEEVGS----WLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            D ++ +E+VA +F R F  +D+F++GC++C+LL DNLLT  QRV +  +L    ++  +G+NPF    L+  E   D  E++                 R  A   A  V+ E+E   +E     D+++LR+ ++E+         P LR AG+R VL DP   G   G+    W    P              AG     G  AP  PL  + M L +G  GGSL++  FEPE +RPVPPLLP+  SEVMWL+P+YAP  LWD S+GQDSS+GAEVR ++ +AF  PL   QQQQVL ELQAD+RLVY CGLTP KLP LVENNPMIA+ECL +LMSSSQITE+LSALVNM+MSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENI+DKYMQNRLVRLVCVFLQSLIRNKIINV+ LFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 DNEEAVETVAGRFQRAFAATDYFRIGCSVCMLLADNLLTSAQRVAAIILLWSWGKDGSSGSNPFHGTLLQIAEETADARERRLXXXXXXXXXXXXXXXXRAWALLPAAAVLGEFESPQSEEG-ASDVTSLRRAHAERERGGAGVRAPGLRAAGLRPVLADPCEGGRTWGTGGSAWFAGGPRG------------AGKRPAAGRRAPETPLPPEAMALMEGPEGGSLTMEGFEPEIIRPVPPLLPVEASEVMWLHPEYAPRFLWDASLGQDSSRGAEVRQLVGRAFKAPLPQAQQQQVLAELQADSRLVYLCGLTPQKLPALVENNPMIAVECLQRLMSSSQITEHLSALVNMDMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIRDKYMQNRLVRLVCVFLQSLIRNKIINVQALFIEVQAFCIEFSRIREAAGLFRLLKTLE 451          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A7S2RYB1_9STRA (CCR4-NOT transcription complex subunit 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYB1_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 1.610e-147
Identity = 252/438 (57.53%), Postives = 317/438 (72.37%), Query Frame = 1
Query:   16 LESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGT-NPFLPFFLEAIENGTDPVEKQYLVHLLCSPPTNRNSARKNA----LQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEVGSWLPARPEEQVGRASGGATLR---AGLPVKGGAVAPIKPLTLDQMCLSDGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            LE+V   F R F+R+DH+K+ CA+ ILL D LLTRTQR++SF +L +L+    N   NPFLP FL  +E  +D  E+ ++  L+      R+S RK +    L+ + + +  PAE   VP+++ LRQ + + +P+ P L +A VR V+ DP+   +E G  +          A+GGA      +  P      AP + L+ D+M    G    ++ L    P F RP+PPLL +TD+E+MW+NPDYAP LLWD+++ +D++KG EVR++M+KAF  PL   +QQ VLNEL+ D RLVYHCGLTP KLP+LVENNP+IAIECLLKLMSS+Q+ EYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIR KIINV+DLFIEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   25 LEAVLADFQRAFSRNDHYKLCCALNILLVDQLLTRTQRIISFFVLHELFGLAGNAAVNPFLPSFLATLEGPSDTPEQPFVAGLIGPSSAYRDSVRKKSARDLLEDLVQRKAMPAE---VPNVATLRQKHLDSSPSPPGLDSATVRPVVHDPL---DENGLGVVP--------AAGGAXXXXTASPSPRPEAHFAPTESLSPDEMRELLGPEAAAMGLGGLRPPFPRPMPPLLTVTDAELMWINPDYAPRLLWDSTLCRDNAKGQEVRELMSKAFKGPLKLDEQQHVLNELENDNRLVYHCGLTPQKLPELVENNPIIAIECLLKLMSSNQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRTKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 448          
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Match: A0A067CRR8_SAPPC (CCR4-NOT transcription complex subunit 11 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRR8_SAPPC)

HSP 1 Score: 445 bits (1145), Expect = 2.940e-146
Identity = 255/442 (57.69%), Postives = 312/442 (70.59%), Query Frame = 1
Query:    1 DEDDILESVAQKFHRIFTRSDHFKVGCAMCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIE--NGTDPVEKQYLVHLLC---SPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQLYSEKNPAVPSLRTAGVRLVLPDPVVSGEEVGSWLPARPEEQVGRASGGATLRAGLPVKGGAVAPIKPLTLDQMCLSDGAWGGSLSLASFEPEFMRPVPPLLPITDSEVMWLNPDYAPSLLWDTSMGQDSSK--GAEVRDVMAKAFNEPLLPVQQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQITEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLFRLLKTLE 1305
            +ED  +E V   F R FT++DHFKVGC +C++L DN+LT  QRVV FSIL +++RNE N TNPF P  +EA+E  +G DP EK+YL+HLL    +P +  +    NA Q++  +      A L  +L A +QLY ++ P VP   + G+R VLP   +  +E G++                 L A   +    +     LT D + L       + +L S  P F+RP P +L    SE MWL+PDY P+LLWDT M +D+    G E+RD+MAKAF  PL+P QQQ+VL +L+AD +LVY C LTP++LPDLVENNPMIAIECLLKLM+S+QITEYLSALVNM+MSLHSMEVVNRLTT+VDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINV+DL IEVQAFCIEFSRIREAAGLFRLLKTLE
Sbjct:   16 EEDKSVEVVVSMFLRSFTKNDHFKVGCMVCLMLADNVLTSNQRVVGFSILSEVFRNETN-TNPFFPSLVEALEAPHG-DPAEKRYLIHLLARMSAPGSEPSKKNLNAKQLLQHFRNETKVASL--NLDAEKQLYFDRTPRVPESLSQGIRGVLPYSALEFQEHGNYN---------------LLLAPADIAAMTLDDEPTLTADDLNLE------TCTLQSVNPVFVRPAPTILEPEISEYMWLDPDYCPTLLWDTGMYEDADVDCGRELRDLMAKAFVGPLVPSQQQKVLADLEADPKLVYACQLTPARLPDLVENNPMIAIECLLKLMTSNQITEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLIIEVQAFCIEFSRIREAAGLFRLLKTLE 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13146.2269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ18_ECTSI1.080e-26990.11CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A2D4BNE6_PYTIN1.990e-17061.74CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A8K1CP59_PYTOL9.330e-16761.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3XBZ3_GLOUD4.500e-16160.96CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
H3H0V6_PHYRM1.270e-16058.73CCR4-NOT transcription complex subunit 11 n=30 Tax... [more]
A0A484EAT0_BRELC9.540e-15758.55CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
F0W6B0_9STRA2.130e-15259.27CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A836CN98_9STRA1.260e-14756.57CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A7S2RYB1_9STRA1.610e-14757.53CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A067CRR8_SAPPC2.940e-14657.69CCR4-NOT transcription complex subunit 11 n=3 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13146contigH-elongata_contig13146:1478..7655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score709.5
Seed ortholog evalue8.9e-202
Seed eggNOG ortholog2880.D7FJ18
EggNOG free text desc.gene silencing by RNA
EggNOG OGsCOG3823@1,KOG4508@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_004770.1
Exons10
Model size2394
Cds size1224
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13146.2269.1prot_H-elongata_contig13146.2269.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13146 2564..7571 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929780.5969024-UTR-H-elongata_contig13146:1477..25631622929780.5969024-UTR-H-elongata_contig13146:1477..2563Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13146 1478..2563 -
1691679154.9085925-UTR-H-elongata_contig13146:1477..25631691679154.9085925-UTR-H-elongata_contig13146:1477..2563Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13146 1478..2563 -
1622929780.8514104-UTR-H-elongata_contig13146:7571..76551622929780.8514104-UTR-H-elongata_contig13146:7571..7655Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13146 7572..7655 -
1691679155.0339563-UTR-H-elongata_contig13146:7571..76551691679155.0339563-UTR-H-elongata_contig13146:7571..7655Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13146 7572..7655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929780.6090858-CDS-H-elongata_contig13146:2563..26561622929780.6090858-CDS-H-elongata_contig13146:2563..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 2564..2656 -
1691679154.921996-CDS-H-elongata_contig13146:2563..26561691679154.921996-CDS-H-elongata_contig13146:2563..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 2564..2656 -
1622929780.6217723-CDS-H-elongata_contig13146:3012..30811622929780.6217723-CDS-H-elongata_contig13146:3012..3081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3013..3081 -
1691679154.930071-CDS-H-elongata_contig13146:3012..30811691679154.930071-CDS-H-elongata_contig13146:3012..3081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3013..3081 -
1622929780.6363924-CDS-H-elongata_contig13146:3328..34361622929780.6363924-CDS-H-elongata_contig13146:3328..3436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3329..3436 -
1691679154.9383864-CDS-H-elongata_contig13146:3328..34361691679154.9383864-CDS-H-elongata_contig13146:3328..3436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3329..3436 -
1622929780.6928983-CDS-H-elongata_contig13146:3815..40371622929780.6928983-CDS-H-elongata_contig13146:3815..4037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3816..4037 -
1691679154.958218-CDS-H-elongata_contig13146:3815..40371691679154.958218-CDS-H-elongata_contig13146:3815..4037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 3816..4037 -
1622929780.709716-CDS-H-elongata_contig13146:4205..43161622929780.709716-CDS-H-elongata_contig13146:4205..4316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 4206..4316 -
1691679154.9708862-CDS-H-elongata_contig13146:4205..43161691679154.9708862-CDS-H-elongata_contig13146:4205..4316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 4206..4316 -
1622929780.744682-CDS-H-elongata_contig13146:5163..52861622929780.744682-CDS-H-elongata_contig13146:5163..5286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 5164..5286 -
1691679154.9793491-CDS-H-elongata_contig13146:5163..52861691679154.9793491-CDS-H-elongata_contig13146:5163..5286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 5164..5286 -
1622929780.761749-CDS-H-elongata_contig13146:5746..59091622929780.761749-CDS-H-elongata_contig13146:5746..5909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 5747..5909 -
1691679154.9875445-CDS-H-elongata_contig13146:5746..59091691679154.9875445-CDS-H-elongata_contig13146:5746..5909Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 5747..5909 -
1622929780.8046439-CDS-H-elongata_contig13146:6346..64771622929780.8046439-CDS-H-elongata_contig13146:6346..6477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 6347..6477 -
1691679154.9977791-CDS-H-elongata_contig13146:6346..64771691679154.9977791-CDS-H-elongata_contig13146:6346..6477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 6347..6477 -
1622929780.8196757-CDS-H-elongata_contig13146:6968..71301622929780.8196757-CDS-H-elongata_contig13146:6968..7130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 6969..7130 -
1691679155.0143347-CDS-H-elongata_contig13146:6968..71301691679155.0143347-CDS-H-elongata_contig13146:6968..7130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 6969..7130 -
1622929780.8335683-CDS-H-elongata_contig13146:7529..75711622929780.8335683-CDS-H-elongata_contig13146:7529..7571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 7530..7571 -
1691679155.024766-CDS-H-elongata_contig13146:7529..75711691679155.024766-CDS-H-elongata_contig13146:7529..7571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13146 7530..7571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13146.2269.1

>prot_H-elongata_contig13146.2269.1 ID=prot_H-elongata_contig13146.2269.1|Name=mRNA_H-elongata_contig13146.2269.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=408bp
MCILLCDNLLTRTQRVVSFSILCDLYRNEPNGTNPFLPFFLEAIENGTDP
VEKQYLVHLLCSPPTNRNSARKNALQVIAEYEGTPAEAVLVPDLSALRQL
YSEKNPAVPSLRTAGVRLVLPDPVVSGEEVGSWLPARPEEQVGRASGGAT
LRAGLPVKGGAVAPIKPLTLDQMCLSDGAWGGSLSLASFEPEFMRPVPPL
LPITDSEVMWLNPDYAPSLLWDTSMGQDSSKGAEVRDVMAKAFNEPLLPV
QQQQVLNELQADARLVYHCGLTPSKLPDLVENNPMIAIECLLKLMSSSQI
TEYLSALVNMEMSLHSMEVVNRLTTSVDLPTEFIHLYISNCISSCENIKD
KYMQNRLVRLVCVFLQSLIRNKIINVEDLFIEVQAFCIEFSRIREAAGLF
RLLKTLE*
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mRNA from alignment at H-elongata_contig13146:1478..7655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13146.2269.1 ID=mRNA_H-elongata_contig13146.2269.1|Name=mRNA_H-elongata_contig13146.2269.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6178bp|location=Sequence derived from alignment at H-elongata_contig13146:1478..7655- (Himanthalia elongata Himel1 dioecious)
GATGAAGATGACATCCTGGAGAGCGTGGCGCAAAAATTTCACCGGATCTT CACGCGAAGCGACCACTTTAAAGTGGGATGCGCTATGTGTATACTTCTTT GCGACAACTTGCTGACACGCACTCAGGTTCGACTTGGCGTCAATGTATTC TGTGGTAGAGATGCGGGGAACGGAACACAACGAAAACCCTCTTGCTCTCT AGCATACTTGATCGTCAAATTATATTGGTAGTATTTTGTCCGAAGCATGG ATTTCTTGAAAAATGGCACCTGGGGTAAAACGTAGTCAAACTCCCAGCCA TGATACTGGCTTGAGCGAGGGCAAACATTTTTGTTGTGTTTACAACAGTA GCCGCCGTCTACCAAAAACGTACCCAGTGTTCGCACAAGTGCACAATATG CTTCTGCAAGGCAAAACTCGCCTCGCCTTCTTTCGCTTTGGCGACGTTGC TGTCAAAGGTGCACGTTTGATCCTCCACGTGGCAACGCGATGTCCTTGTT TTTCGTACGACGCCGCTTGTTCCAGCGGGTTGTGTCGTTTTCCATCCTTT GCGATCTATACCGCAACGAACCAAACGGGACGAACCCGTTCCTGCCGTTC TTTTTGGAGGCCATCGAGAACGGAACGGACCCTGTCGAGAAGCAGTACCT GGTGCACCTCCTATGTTCCCCACCAACCAACCGTAACGTAAGTGCACAGG CAACGTTGATCGCGACACTCGTGCATATGAAAAATCTGAATGCTAGAAGA GTTGATGGCAAGTACTTAAAACGTCCCCTTTCTTGATTTGTGTTGAACGT CAAGTGGGATAATCTCATGGGTTCTGAGGCGAAGCGTTTCCATTGTTCCC TTAGCAAACTGTATTATTTCCTCCGATGTAGGGCGTGTGATTAAGGGGAT CGTAGGGATAGCTTTGACCGCAGTCGAGGGAATTCGGATGCCAAAAATTC TAAGTGTACAACTAGAGCTAGTTCGTAATCCAATTTACCAGCCGTTTCAA GGGATCCTGTACACAGAGCTAGCCTTGATTCGTACGATGGAGTGATATAT CGAATGTAAAACAGAAGCTGATGATAGCATTTTCCCAAAACCTTGTGGAG GTGTCGGTATTCTTGTAGATCACGTCCCAACAATACCTTGGATGTTTTTC GCCTCTACGCATGCACCATCATGCGCAGTCCGCGCGGAAAAATGCGCTGC AAGTGATCGCAGAGTACGAAGGCACGCCAGCAGAAGCCGTGTTAGTCCCA GACCTGTCGGCGTTGCGACAGTTGTATAGCGAGAAGAATCCTGCGGTACC AAGCCTAAGGTACGGCGTATTTGGTTTTCAAGCGATTGAAAGCGAAAACG GTACTCAATGCAGAAAGTCCAGGCGGGTGCGATATTATGTAGCACGGAGC CTATACAAATTCTACACTGTCTCTTACGTGCAATAACTCCACTGAAATAG CTGATGTCACGAGACCGTTTGTATCCGTAAAGAGTCTCCGCGAGGAGTCT CAAGTTGGAGGAGTTGTTGTTAGTCTTTTAATCTACTATTGGTCGTGAAG TGTACACACGCGTCTGCTGTTCCGTAGGTGGTGTTTGGACGATTTGAGTG GGTTAGCTCTAACTGCAGGTAATCGAAAAAATCGAGCATTTCCCGAACAC CAAACCCCCTTGGGTTATCTCTACCACATGAAATTGGCAAAAATGAACAG TTTCCCCTGAACCCCCTATCTATTTCACGGTGACCCGCTTCATCAGGACA GCGGGCGTCCGACTAGTACTACCAGACCCCGTCGTAAGTGGCGAAGAAGT GGGTTCATGGCTGCCGGCTAGGCCGGAAGAGCAGGTGGGACGGGCATCTG GTGGGGCCACTCTGCGAGCTGGACTGCCAGTAAAGGGAGGGGCAGTAGCC CCGATTAAGGTACGATATCGTCATACGATATTCATCTGCATGTGCGCAAC CAACCCTCGAAGGTTGAAGATTGTTTAAGCGTCAAAAAAGTTGTGGTTGT GTGTCTCGAGTGTGATCTGCTGCTGGCGATTAGTAATAAGACATTTCGAG CGTGTTGCACTTGCCATGCACTAACGTATTGCGGGCACAGTAGGTTTCAC TTTTTCACTAGGGCTCAAACTCTCTCACCCTCGTGCATTCGGAAGGTTGA GCTTAGTTGGAATTCGACAAGTTGTTCCTAATAGTTTGAGCTCCCGGTAG CTGGTTAGTAGTCGTAGTCGTAGTCGTCCTTTAACATGGTCGTTCGTCCT TTAACATGGTCGTAGTCTAATTAACAGCATGAGCGAGCTCGAGTTCGATA TAGTTCTTGTGTATGAAAAGTATATTTTTCTGACGGTGACAAGCCGTCTT TGATCGCCGGTTTCTGCAGCCATTGACGCTAGATCAGATGTGTTTGAGCG ACGGGGCATGGGGGGGCTCCCTGTCGCTGGCAAGCTTCGAGCCAGAGTTC ATGCGGCCGGTGCCTCCATTGCTTCCGATAACGGATTCGGAGGTGAGAGT CAGAGCATATCTTAGGTGGGTATAAGTGCATTATTTTCTCCTAGTATGTA TGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATG TATGTATGTATGTATGCATGTATGCATGTATGTATGTGTGTATGTATAAT CATAACATATAGCAGAGTAAGATAACCGTATTTGGCTGCCTTCTGCTCGT GGCCAGCTGAACAGAGAAACTATATTTTTCCTATCCCCATTTGCGCCTGG TAATTTGGTCTCGCGAGACGGGTTCAACAGTCCCGTTCCGCGTTAGCCTG CTCATTCTCTCAACCCAGATTGAATCTGGTGCGTACTCCCGGAATCCTTT CGAACCTCTTGTTTTCCGTGAGGGCGTCCATCTCTACCGTCAACCACCAT CGGGCCAATCCTGATTTCATCAGTTCACACAATTGCGTACCGATGGTGTT TATTACCGAGAGTCTGCCGGCACTGAGCCAATAGTCCTCAAGGTAGCTTG AGTAACAGGTGCAACCTGTTGAGGAAGCCCCATGGACCAATTATTATACG CCTCTCTTTTTCCACACCCGCTATGGGTGGAGAGAGCATGACGGTTTGCA GAGGCATGATAAGCATATGGTATTTTTGTGCATCGAAGCACCCGCTACAA TTATGGATTTGGCCGGATTACACTGCCCATAGACGAGACCGTACAACAGC TTCCAGGAGGCAATATTTGCCAAAGCGGTAATCGCCGTAAGCAAAACTTG GACTCTAGACCAAGTCTCTGTTTTACGAAACGCTTCCGTAACTCAGGTGT GCGACTTCCAACGTCCTAACTCTACGTGGTACTTCACAGGTCATGTGGCT AAATCCAGACTACGCCCCGAGCTTACTTTGGGATACAAGCATGGGACAAG ATAGCTCGAAGGGGGCAGAGGTTCGAGACGTAATGGCGAAGGCGTTCAAT GTAAGCGATGTAGTTCTTGCGGGTTGGCGAGGCCTCGAGCGTGCCATCCA AACACTTCGAACACACTCAAGCGACCAACATCTTAAAGCTGTGTTCTTCA TTCCGCAGCGGAATACATATCGTTTGTGGTTTTAGCGCCCTATTATGCTG TATATTTTGGTCCCGCAGGAGCCTCTGCTGCCAGTTCAACAGCAGCAGGT ACTCAATGAGTTACAAGCCGACGCGCGGCTGGTGTACCACTGCGGGCTGA CACCGTCAAAGCTTCCCGATCTGGTGGAGAACAACCCTATGATTGCGATA GAATGCCTGCTGAAGCTCATGTCTTCGAGTCAGATCACCGAGTACCTGAG TGCTCTGGTCAACATGGAAATGTCTCTACACTCTATGGAGGTATGCTCAC AATGCTGGGGTTTGCGCATCTTGTTGATCGTGCAAGTAGCGCAAGCTACG GTTACGTTTTGTTACCTCGTCCACAAGGCGAAAAATATAATCAGGGCTCG GAGATATGTTACGGTATGAAGCTGGTGTTGCAGTTTGGTGTTTTTGGCCC CGGCTAAAAACATTTTGCATTCGGATCAAAACCACGTCATACTGCCCCTG TCACTTTCCTCTTCAGTAAAGCTCGACGAAATATTGATATATGACGGGAG TCCTAACCAATGGTGGCGACTAGAAGAGCAGATAATTTATGGCCCTATAG GAATACGGCAACGGTACGAGTAACCAATAATCACGCCGGAGTAATATAAA TACATGCATCCCATTCCAGGTGGTGAACCGTCTAACCACGAGCGTGGATC TGCCGACGGAATTCATTCACCTTTACATCTCCAATTGTATCTCAAGTTGC GAGAATATTAAAGACAAGTACATGCAGGTGAGAGTGACTTAACCTTGTTA TTTGTAGCGCTACTTCTTGTACTTCTTGCGAAATACGCTATGCTACAAGT ATTGTTGCCACCGCTATTTCAAATGTGAAACAACAGGGTCCGCTTGTTTA AGGCTGGAGGCAAAGAAACTCATCTCTACGTAGCATAGTTTCCGGTGATT CTCCAGCAAAATGTCTCAAACATCTCAATGTCCCTGTGCCACCCTTTCTT ATCGACTTTGCCTTCGTATGCCAGAATCGACTGGTTCGACTGGTTTGCGT CTTTTTGCAATCTCTTATCAGGAATAAGATAATTAACGTGGAGGTGAGTA GCATGTTTCTTTAGGCGGCAGTCATGTCTATGTAACTCATGAAGATTGAT TAGGCCTCAACAGCGCTGCCCCCTCCTTATACGTGATGTACAGCTATTGC AATACTTGAACTTTGCATCTGCCCTGATGACACTACCGGAGTTCTTAGTG TTCTTAGTCATGTGGTGACACAATGATAATACGTATTCGTAGTTGCAACC CGCAGCTTTATGGTTCGTGATGTTCTGACAAATAGAGTCAACCTTGGAAT ACTGACGCGACTGGGTATACATATTGCTGCCACATCAATAGTTCAAATAC AGGTCATCACAACGCGTTCGTTTTGCGCCCGTCCTTGGCGCCGTAACAGG ACCTCTTCATCGAGGTGCAGGCGTTCTGCATTGAGTTCTCTAGGATCAGA GAGGCGGCGGGTCTCTTTCGCCTCCTAAAAACTCTAGAGTAGACCCTGTT GCTTCAGTTACTTCTGGCGTTTATGCATTCATTGAAGGTGAACGGGAATC CTTCCGGCAAGGTGTCACTGTCGCAACAGTCTCGATTACTCATCGACGAC TCAGCGACAAAATATTTTGAAGATACTTGCGTGTCGCTGCTCGTCAGCGT CAACTTACGGTATGGCATTCCCAGCCAGGCTCTTCTGATGGGTGAGGCTG TTGTCATCTTTCATCGTTTTGGCCAGTATTCCACGAACTATGACCGCGTA GTGCGTACTCCACATGCCTAATGATACATGCGAAGGCGCGTGTTGAGTGA ACGTACTTGACTCGGAGTGCTATATACTGGGTGCACACCTTGATTAAAAT GATGATCGATTGTAAAGTAAAGCCACGTCGTCCAGCGACAAAGTACGCTC GTAGATTATTTGCCTTAGTGCTCATAAATTTCTACATGCAGGACGTGGGG ATCTAGATTCCGCTTTATCGTAGCCTGCCGCAGAAGGGGCCCCTGTCTTT CTTGCCGAATGATCACAATTGTTAGGGAATGTCGACGTTGGTACCTATTA ATTTTTGTGTTTCTTTTCCTTGAGTACATGATTATGGGTATAGCGTTGAA GGCGTCGACCATGACCGTATACGCCGGGCTAGTGGATCGAGCACTGCTTG CACTTGGCTTGCTGCTGGGCATGGTGCTGCGTTGTGACGTCGACGAACGC AAAAAGCTGTGGCCGGCCCTCCTCGGGTTCCGCGCTAATTGCAGACTCCA AAGCTCCCCAAATGGAGGATCCTACCACTCATGGTCCGCACTCGACTATT AATAGTTGCGTGCTGTGTGTGCTCTTGTTTCGACTAGTTGCGTGCTGTGT GAAAATTACCGCAGAATTGCCACAGAAAACCGTGTTACTTATCGCTACAC CGGTAATTTCTGGTGTAACGGTAACGCTGATCATTGCCTATTATTATTAC AGTACAGTAGTTGTTGTTCTCTGGTGTGAGAACTATTTGCTGTTGAAACA CCCCCCCTTTTTTTACACCTGTATCTTCCGTATCATTACATGAATCCTTC TCTAAATCCTATACAACATTTGTGACAT
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Coding sequence (CDS) from alignment at H-elongata_contig13146:1478..7655-

>mRNA_H-elongata_contig13146.2269.1 ID=mRNA_H-elongata_contig13146.2269.1|Name=mRNA_H-elongata_contig13146.2269.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2448bp|location=Sequence derived from alignment at H-elongata_contig13146:1478..7655- (Himanthalia elongata Himel1 dioecious)
ATGTGTATACTTCTTTGCGACAACTTGCTGACACGCACTCAGATGTGTAT
ACTTCTTTGCGACAACTTGCTGACACGCACTCAGCGGGTTGTGTCGTTTT
CCATCCTTTGCGATCTATACCGCAACGAACCAAACGGGACGAACCCGTTC
CTGCCGTTCTTTTTGGAGGCCATCGAGAACGGAACGGACCCTGTCGAGAA
GCAGTACCTGGTGCACCTCCTATGTTCCCCACCAACCAACCGTAACCGGG
TTGTGTCGTTTTCCATCCTTTGCGATCTATACCGCAACGAACCAAACGGG
ACGAACCCGTTCCTGCCGTTCTTTTTGGAGGCCATCGAGAACGGAACGGA
CCCTGTCGAGAAGCAGTACCTGGTGCACCTCCTATGTTCCCCACCAACCA
ACCGTAACTCCGCGCGGAAAAATGCGCTGCAAGTGATCGCAGAGTACGAA
GGCACGCCAGCAGAAGCCGTGTTAGTCCCAGACCTGTCGGCGTTGCGACA
GTTGTATAGCGAGAAGAATCCTGCGGTACCAAGCCTAAGTCCGCGCGGAA
AAATGCGCTGCAAGTGATCGCAGAGTACGAAGGCACGCCAGCAGAAGCCG
TGTTAGTCCCAGACCTGTCGGCGTTGCGACAGTTGTATAGCGAGAAGAAT
CCTGCGGTACCAAGCCTAAGGACAGCGGGCGTCCGACTAGTACTACCAGA
CCCCGTCGTAAGTGGCGAAGAAGTGGGTTCATGGCTGCCGGCTAGGCCGG
AAGAGCAGGTGGGACGGGCATCTGGTGGGGCCACTCTGCGAGCTGGACTG
CCAGTAAAGGGAGGGGCAGTAGCCCCGATTAAGGACAGCGGGCGTCCGAC
TAGTACTACCAGACCCCGTCGTAAGTGGCGAAGAAGTGGGTTCATGGCTG
CCGGCTAGGCCGGAAGAGCAGGTGGGACGGGCATCTGGTGGGGCCACTCT
GCGAGCTGGACTGCCAGTAAAGGGAGGGGCAGTAGCCCCGATTAAGCCAT
TGACGCTAGATCAGATGTGTTTGAGCGACGGGGCATGGGGGGGCTCCCTG
TCGCTGGCAAGCTTCGAGCCAGAGTTCATGCGGCCGGTGCCTCCATTGCT
TCCGATAACGGATTCGGAGCCATTGACGCTAGATCAGATGTGTTTGAGCG
ACGGGGCATGGGGGGGCTCCCTGTCGCTGGCAAGCTTCGAGCCAGAGTTC
ATGCGGCCGGTGCCTCCATTGCTTCCGATAACGGATTCGGAGGTCATGTG
GCTAAATCCAGACTACGCCCCGAGCTTACTTTGGGATACAAGCATGGGAC
AAGATAGCTCGAAGGGGGCAGAGGTTCGAGACGTAATGGCGAAGGCGTTC
AATGTCATGTGGCTAAATCCAGACTACGCCCCGAGCTTACTTTGGGATAC
AAGCATGGGACAAGATAGCTCGAAGGGGGCAGAGGTTCGAGACGTAATGG
CGAAGGCGTTCAATGAGCCTCTGCTGCCAGTTCAACAGCAGCAGGTACTC
AATGAGTTACAAGCCGACGCGCGGCTGGTGTACCACTGCGGGCTGACACC
GTCAAAGCTTCCCGATCTGGTGGAGAACAACCCTATGATTGCGATAGAAT
GCCTGCTGAAGCTCATGTCTTCGAGTCAGATCACCGAGTACCTGAGTGCT
CTGGTCAACATGGAAATGTCTCTACACTCTATGGAGGAGCCTCTGCTGCC
AGTTCAACAGCAGCAGGTACTCAATGAGTTACAAGCCGACGCGCGGCTGG
TGTACCACTGCGGGCTGACACCGTCAAAGCTTCCCGATCTGGTGGAGAAC
AACCCTATGATTGCGATAGAATGCCTGCTGAAGCTCATGTCTTCGAGTCA
GATCACCGAGTACCTGAGTGCTCTGGTCAACATGGAAATGTCTCTACACT
CTATGGAGGTGGTGAACCGTCTAACCACGAGCGTGGATCTGCCGACGGAA
TTCATTCACCTTTACATCTCCAATTGTATCTCAAGTTGCGAGAATATTAA
AGACAAGTACATGCAGGTGGTGAACCGTCTAACCACGAGCGTGGATCTGC
CGACGGAATTCATTCACCTTTACATCTCCAATTGTATCTCAAGTTGCGAG
AATATTAAAGACAAGTACATGCAGAATCGACTGGTTCGACTGGTTTGCGT
CTTTTTGCAATCTCTTATCAGGAATAAGATAATTAACGTGGAGAATCGAC
TGGTTCGACTGGTTTGCGTCTTTTTGCAATCTCTTATCAGGAATAAGATA
ATTAACGTGGAGGACCTCTTCATCGAGGTGCAGGCGTTCTGCATTGAGTT
CTCTAGGATCAGAGAGGCGGCGGGTCTCTTTCGCCTCCTAAAAACTCTAG
AGTAGGACCTCTTCATCGAGGTGCAGGCGTTCTGCATTGAGTTCTCTAGG
ATCAGAGAGGCGGCGGGTCTCTTTCGCCTCCTAAAAACTCTAGAGTAG
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