prot_H-elongata_contig13137.2263.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13137.2263.1
Unique Nameprot_H-elongata_contig13137.2263.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length49
Homology
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.900e-11
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    6 PELPEICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            P LPEIC+ GFRN WRC FDR +DELYC DVG  L+  I  VE
Sbjct:  305 PALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVE 347          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 8.160e-10
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   10 EICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            E+C+IG RN WRCGFDRL+D+LYC DVG  L+  I  +E
Sbjct:  325 EVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE 363          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.110e-9
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   10 EICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            E+C+IG RN WRCGFDRL+D LYC DVG  L+  I  +E
Sbjct:  249 EVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIE 287          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.320e-9
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    8 LPEICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            L EIC+IGFRN WRC FDR +D+LYC DVG   +  I  VE
Sbjct:  307 LDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVE 347          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 9.960e-9
Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    8 LPEICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            L EIC+IGFRN WRC FDR +D LYC DVG   +  I  VE
Sbjct:  370 LDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVE 410          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: A0A7W1FNL7_9BACT (PQQ-dependent sugar dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1FNL7_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 1.830e-5
Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    1 PFCRRPELP-EICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE 48
            PF   P+   E+ + G RN+W+  FDR++ +L+ CDVGQ+L  S+ ++E
Sbjct:  249 PFLTIPKARGEVWAYGLRNVWKMSFDRVTGDLWGCDVGQDLWDSVMRIE 297          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: A0A7C4ZZZ9_9CHLR (Glucose dehydrogenase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4ZZZ9_9CHLR)

HSP 1 Score: 48.5 bits (114), Expect = 3.410e-5
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0
Query:    9 PEICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIY 45
            PEI S G+RN WR  FDR++D++Y  DVGQN    I+
Sbjct:  199 PEIWSYGWRNPWRFSFDRVTDDMYIADVGQNQYEEIH 235          
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Match: A0A7V9S436_9BACT (PQQ-dependent sugar dehydrogenase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V9S436_9BACT)

HSP 1 Score: 47.4 bits (111), Expect = 8.770e-5
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 PFCRRPE-LPEICSIGFRNIWRCGFDRLSDELYCCDVGQN 39
            PF   P+ L EI ++G RN WR  FDRLS++ +  DVGQN
Sbjct:  202 PFVASPDTLDEIWALGLRNPWRISFDRLSNDFWIADVGQN 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13137.2263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G6T7_ECTSI4.900e-1165.12WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G957_ECTSI8.160e-1061.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT40_9PHAE1.110e-961.54GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JZF5_9PHAE5.320e-960.98GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G4P3_ECTSI9.960e-960.98Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A7W1FNL7_9BACT1.830e-540.82PQQ-dependent sugar dehydrogenase n=1 Tax=Planctom... [more]
A0A7C4ZZZ9_9CHLR3.410e-554.05Glucose dehydrogenase n=1 Tax=Anaerolineae bacteri... [more]
A0A7V9S436_9BACT8.770e-552.50PQQ-dependent sugar dehydrogenase n=1 Tax=Bacteroi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 1..48
e-value: 5.7E-8
score: 34.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13137contigH-elongata_contig13137:362..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13137.2263.1mRNA_H-elongata_contig13137.2263.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13137 362..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13137.2263.1 ID=prot_H-elongata_contig13137.2263.1|Name=mRNA_H-elongata_contig13137.2263.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
PFCRRPELPEICSIGFRNIWRCGFDRLSDELYCCDVGQNLIGSIYKVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0110426-blade_b-propeller_TolB-like