prot_H-elongata_contig13121.2256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13121.2256.1
Unique Nameprot_H-elongata_contig13121.2256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length281
Homology
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5KVP8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP8_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.920e-98
Identity = 174/274 (63.50%), Postives = 195/274 (71.17%), Query Frame = 0
Query:    1 MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMD 264
            +SC Q+LA KTGI   NI KW       KLIAAA +DL+ DL K GRERRWFG  + KLH  LL+RR  KLR STAWIRVN +KLV+E YP+D R ++F  S+RWCRKFAKRHHLSKRRR +MKNK  SV+D L QM SF R+LRQLLQE  V  AAA GAAE++ A + PV +  YG FSLN    NVDQVGLA VNG +STWDE  A RVQ  QPFP LEKRQCTVN  IGAGDK M     F G+G       AAYDPGVDV FQENAWMD
Sbjct:   79 VSCQQFLARKTGISQPNICKWNGD--AEKLIAAAANDLKNDLFKTGRERRWFGDAEKKLHSLLLQRRTRKLRVSTAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMRSFRRRLRQLLQELPVRRAAAGGAAENNGAAIVPVESPLYGGFSLNA-HFNVDQVGLAFVNGPDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLMRTAVIFRGKGKVSAVEKAAYDPGVDVLFQENAWMD 347          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JT88_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT88_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 1.050e-84
Identity = 163/277 (58.84%), Postives = 183/277 (66.06%), Query Frame = 0
Query:    1 MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 267
            +SC Q+LA KTGIP  NI +W       KLIAAA +DL RDL K GRERR  G  + KLH  LL+RRK KLR STAWIRVN +KLV+E YP+D   ++F  S+RWCRKFAKRHHLSKRRR  MK K  SV+D L QM SFHR+LRQLLQ                 A + PV +  YGRFSLN  R NVDQVGLA VNG++STWDE  A RVQ  QPFP LEKRQCTVN  IGAGDK M     F  +G       AAY PGVDV FQEN+W D  T
Sbjct:   81 VSCQQFLARKTGIPQPNICRWNGD--AEKLIAAAANDLIRDLFKTGRERRRSGDAEKKLHSLLLQRRKRKLRVSTAWIRVNARKLVVEMYPDDPCAKNFSASDRWCRKFAKRHHLSKRRRTSMKKK--SVEDRLPQMKSFHRRLRQLLQXXXXXXXXXXXXXXXXXAAIVPVESSLYGRFSLNA-RFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLMPTAVIFRWKGKVSVVEKAAYYPGVDVLFQENSWTDGPT 352          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JKI0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI0_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 2.140e-83
Identity = 163/278 (58.63%), Postives = 183/278 (65.83%), Query Frame = 0
Query:    1 MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNK-LHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 267
            +SC Q+LA KTGIP  NI KW       KLIAAA +DL+ DL K G ERRWFG  +   L   LL+ RK KL  STAWIRVN +KLVME YP+D R + F  S+RWCRKFAKRHH SKRRR +MKNK  SV+D L QM SFHR+LRQLLQEP V  AAA G AE++ A + PV +  YGRFSL+  R  VDQVGLA VNG++STWDE  A R              CTVN  IGAGDK M     F GEG       AAYDPGVDV FQENAWMD  T
Sbjct:   97 VSCQQFLARKTGIPQPNICKWNGD--AEKLIAAAANDLKNDLFKTGIERRWFGDAEKAALDSLLLQPRKRKLGVSTAWIRVNARKLVMEMYPDDPRAKSFSASDRWCRKFAKRHHPSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLLQEPPVRRAAAGGEAENNGAAIVPVKSPLYGRFSLDA-RFTVDQVGLAFVNGLDSTWDETGALR--------------CTVNCCIGAGDKLMRTAVIFRGEGKVLAVEKAAYDPGVDVLFQENAWMDGPT 355          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JLC5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC5_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 7.460e-69
Identity = 134/239 (56.07%), Postives = 155/239 (64.85%), Query Frame = 0
Query:    1 MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFM 238
            +SC Q+LA KTGIP  NI KW       KLIAAA +DL++DL K GRERRWFG  + KLH  LL+RRK KLR STAWIRVN +KL++  YP+D R ++   S+RWCRKFAKRHHLSKRRR +MKNK  SV+D L Q  SFHR+LRQLLQEP +             A +                      VGLA VNG++STWDE  A RVQ  QPFP LEKRQCTVN  IGAGDK M
Sbjct:   98 VSCQQFLARKTGIPQPNICKWNGD--AEKLIAAAANDLKKDLFKTGRERRWFGDAEEKLHSLLLQRRKRKLRVSTAWIRVNARKLLVAMYPDDPRAKNLSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQTKSFHRRLRQLLQEPPIRXXXXXXXXXXXGAAI----------------------VGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLM 310          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JZQ9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ9_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 1.370e-68
Identity = 134/206 (65.05%), Postives = 149/206 (72.33%), Query Frame = 0
Query:   74 TAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAG---DKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 267
            TAWIRVN +KLV+E YP+D R ++F  S+RWCRKFAKRHHLSKRRR +MKNK  SV+D L QM SFHR+LRQLLQEP V  AAA  AAE++ A + PV +  YGRFSLN  R NVDQVGLA VNG++STWDE  A RVQ  QPFP LEKRQCTVN  IGAG   DK       F G G       AAYDPGVDV FQENAWMD  T
Sbjct:  368 TAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLLQEPPVRRAAAGCAAENNGAAIVPVESPHYGRFSLNT-RFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGXAGDKLRRTAVIFRGNGKVSAVEKAAYDPGVDVLFQENAWMDDPT 570          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5L2Y0_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y0_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 3.640e-63
Identity = 128/220 (58.18%), Postives = 146/220 (66.36%), Query Frame = 0
Query:   57 KLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 267
            KLH  LL+RRK +LR STAWIR    KLV+E YP+D R ++F  S+RWC KFAKRHHLSKRRR +MKNK  SV+D L QM SF R+LRQLLQE                A + PV +  YGRFSL   R NVDQVGLA+V+G++S WD   A RVQ  QPFP LEKRQCTVN  IGAGD  M     F G+G       AA+DPGVDV FQENAWMD  T
Sbjct:    2 KLHSLLLQRRKRELRVSTAWIR----KLVVEMYPDDPRAKNFSASDRWCMKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFRRRLRQLLQEXXXXXXXXXXXXXXXXAAIVPVESPLYGRFSLTA-RFNVDQVGLAIVDGLDSKWDGTGALRVQIGQPFPGLEKRQCTVNCCIGAGDNLMRTAVIFRGKGKVSAVEKAAHDPGVDVLFQENAWMDGPT 214          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JUY8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY8_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.270e-60
Identity = 117/188 (62.23%), Postives = 131/188 (69.68%), Query Frame = 0
Query:   89 YPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQGF---------GGEGAAYDPGVDVFFQENAWMDSAT 267
            YP+D R ++F  S+RWCRKFAKRHHLSKRRR +MK  + SV+  L QM SFHR+LRQLLQEP V  AAA GAAE++ A + PV +  YGRFSLN  R NVDQ GLA VNG++STWDE  A RVQ  QPFP LEKRQCTVN  IGAGDK M               E AAYDP V V FQENAWMD  T
Sbjct:    2 YPDDPRAKNFSTSDRWCRKFAKRHHLSKRRRTNMK--HNSVEGRLPQMKSFHRRLRQLLQEPPVCRAAAGGAAENNGAAIVPVESPLYGRFSLNA-RFNVDQFGLAFVNGLDSTWDETGALRVQIGQPFPDLEKRQCTVNCCIGAGDKLMRTAVIFRDRGKISAVEKAAYDPDVHVLFQENAWMDGPT 186          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5KAP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAP5_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 4.570e-59
Identity = 112/175 (64.00%), Postives = 125/175 (71.43%), Query Frame = 0
Query:   89 YPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVD 254
            YP+D R ++F  S+RWCRKFAKRHHLSKRRR +MKNK  SV+DHL QM  FHR+LRQLLQEP V  AAA GAAE + A + PV    YGRFSLN  R NVDQVGLA V+G++S WDE  A RVQ  QPFP LEKRQCTVN  IGAG K M     F G+G       AAYDPGVD
Sbjct:    2 YPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDHLPQMKRFHRRLRQLLQEPPVRRAAAGGAAEINGAAIVPVEPPLYGRFSLNA-RFNVDQVGLAFVHGLDSIWDETGALRVQSGQPFPGLEKRQCTVNCCIGAGGKLMRTAVIFRGKGKVSAVEKAAYDPGVD 173          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5KER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KER2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.830e-54
Identity = 126/240 (52.50%), Postives = 140/240 (58.33%), Query Frame = 0
Query:   38 LRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 267
            L+ DL K GRERRWFG  + KLH  L + RK KLR STAWIR N + LV                +RWCRKFAK HH SKRRR +M NK  SV+D L QM SFHR+LRQLLQEP V  AAA G AE++ A + P  +  YGRFSLN  R NVDQ                         PFP LEKRQCT+N +IGAGDK M     F GEG       AAYDPGVDV FQENAW D  T
Sbjct:  177 LKNDLFKTGRERRWFGDAEKKLHSLLRQPRKRKLRVSTAWIRFNARMLV----------------DRWCRKFAKLHHPSKRRRTNMTNK--SVEDRLPQMKSFHRRLRQLLQEPPVRRAAAGGEAENNGAAIVPAESPLYGRFSLNA-RFNVDQ-------------------------PFPGLEKRQCTLNCWIGAGDKLMRTAVIFRGEGKISVVEKAAYDPGVDVLFQENAWTDGPT 372          
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5KIH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.650e-49
Identity = 94/150 (62.67%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   89 YPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFM 238
            YP+D R ++F  S+RWCRKFAKRHHLSKRRR +MKNK  SV+D L QM SFHR+LRQL QEP V             A + PV +  YGRFSLN  R NVDQVGLA VNG++STWDE  A RVQ  QPFP LEKRQCTVN  +GAGD  M
Sbjct:    2 YPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLRQEPPVRXXXXXXXXXXXGAAIVPVESPLYGRFSLNA-RFNVDQVGLAFVNGLDSTWDETGALRVQIVQPFPGLEKRQCTVNCCVGAGDDSM 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVP8_9PHAE1.920e-9863.50HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JT88_9PHAE1.050e-8458.84HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JKI0_9PHAE2.140e-8358.63HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JLC5_9PHAE7.460e-6956.07HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JZQ9_9PHAE1.370e-6865.05DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2Y0_9PHAE3.640e-6358.18HTH CENPB-type domain-containing protein (Fragment... [more]
A0A6H5JUY8_9PHAE1.270e-6062.23DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KAP5_9PHAE4.570e-5964.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KER2_9PHAE2.830e-5452.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIH7_9PHAE3.650e-4962.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006600HTH CenpB-type DNA-binding domainPFAMPF03221HTH_Tnp_Tc5coord: 88..117
e-value: 8.4E-5
score: 22.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13121contigH-elongata_contig13121:6310..7152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13121.2256.1mRNA_H-elongata_contig13121.2256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13121 5066..8239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13121.2256.1 ID=prot_H-elongata_contig13121.2256.1|Name=mRNA_H-elongata_contig13121.2256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDLKVGRERRW
FGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMV
SNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEP
AVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGME
STWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQGFGGEGAAYD
PGVDVFFQENAWMDSATKSATHYYGYFPRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006600HTH_CenpB_DNA-bd_dom