mRNA_H-elongata_contig13121.2256.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5KVP8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP8_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 2.790e-123 Identity = 222/353 (62.89%), Postives = 255/353 (72.24%), Query Frame = 2
Query: 851 MFHVPGTCTFELQPRT*VDAVLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMD 1879
M+HV G+C+FELQPRT D D P DGL ++ + KKT+GAE+RT Y+NK++ AAVVAELRELE D AE+IW VHG+SC Q+LA KTGI NI KW KLIAAA +DL+ DL K GRERRWFG + KLH LL+RR KLR STAWIRVN +KLV+E YP+D R ++F S+RWCRKFAKRHHLSKRRR +MKNK SV+D L QM SF R+LRQLLQE V AAA GAAE++ A + PV + YG FSLN NVDQVGLA VNG +STWDE A RVQ QPFP LEKRQCTVN IGAGDK M F G+G AAYDPGVDV FQENAWMD
Sbjct: 1 MYHVRGSCSFELQPRTQGDGTSDLPDDGLLSNEERTKRKKTRGAEKRTQYSNKKK-AAVVAELRELEADDAEKIWHVHGVSCQQFLARKTGISQPNICKWNGD--AEKLIAAAANDLKNDLFKTGRERRWFGDAEKKLHSLLLQRRTRKLRVSTAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMRSFRRRLRQLLQELPVRRAAAGGAAENNGAAIVPVESPLYGGFSLNA-HFNVDQVGLAFVNGPDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLMRTAVIFRGKGKVSAVEKAAYDPGVDVLFQENAWMD 347
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JZQ9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ9_9PHAE) HSP 1 Score: 379 bits (972), Expect = 5.380e-114 Identity = 242/477 (50.73%), Postives = 285/477 (59.75%), Query Frame = 2
Query: 638 PRTFAAEQGRALYCSVMHPAPLRHLGQGLRCALVAGGTIITPP*QG*SGKCFVVRFHRTRGIGHRTTGGTTMFHVPGTCTFELQPRT*VDAVLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKL----------------------------------HVKLLERRKTKLRGS-------------TAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAG---DKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 1888
P+T A+EQ R+L+CS +HPAPLRHLG+GLR AL GGT+ T P G SG+CF +GH T G + AV+ L D+ + KKT+GAE+RT Y+N R+ AAVVAELRELE DHAE+IW VHG+S Q+LA KTGIP NI KW+ KLIAAA +DL++ L K GRERRWFG + V+ +R+T GS TAWIRVN +KLV+E YP+D R ++F S+RWCRKFAKRHHLSKRRR +MKNK SV+D L QM SFHR+LRQLLQEP V AAA AAE++ A + PV + YGRFSLN R NVDQVGLA VNG++STWDE A RVQ QPFP LEKRQCTVN IGAG DK F G G AAYDPGVDV FQENAWMD T
Sbjct: 112 PKTVASEQCRSLHCSAVHPAPLRHLGRGLRRALTTGGTMTTLPWHGYSGRCF--------NVGHTTAAARKCTTCEGAVRLSCNQGS--KAVVHQTC--LWSDEERTKRKKTRGAEKRTQYSN-RKKAAVVAELRELEADHAEKIWHVHGVSWQQFLARKTGIPQPNICKWKGD--AEKLIAAAANDLKKYLFKTGRERRWFGDAERSCTCCCCNGATESSECRQPGFESTRESSWWKCIRTTRVQRTFQRRTGGAGSSRSATIFRNEGAXTAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLLQEPPVRRAAAGCAAENNGAAIVPVESPHYGRFSLNT-RFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGXAGDKLRRTAVIFRGNGKVSAVEKAAYDPGVDVLFQENAWMDDPT 570
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JT88_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT88_9PHAE) HSP 1 Score: 363 bits (931), Expect = 2.850e-109 Identity = 213/358 (59.50%), Postives = 243/358 (67.88%), Query Frame = 2
Query: 851 MFHVPGTCTFELQPRT*VDA--VLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 1888
M+HV G+C+FELQPRT D D P DGL D+ + KKT+GAE+RT Y+N R+ AAVVAELRELE DHAE+IW VHG+SC Q+LA KTGIP NI +W KLIAAA +DL RDL K GRERR G + KLH LL+RRK KLR STAWIRVN +KLV+E YP+D ++F S+RWCRKFAKRHHLSKRRR MK K SV+D L QM SFHR+LRQLLQ A + PV + YGRFSLN R NVDQVGLA VNG++STWDE A RVQ QPFP LEKRQCTVN IGAGDK M F +G AAY PGVDV FQEN+W D T
Sbjct: 1 MYHVRGSCSFELQPRTQGDGDGTSDLPDDGLLSDEERTKGKKTRGAEKRTQYSN-RKKAAVVAELRELEADHAEKIWHVHGVSCQQFLARKTGIPQPNICRWNGD--AEKLIAAAANDLIRDLFKTGRERRRSGDAEKKLHSLLLQRRKRKLRVSTAWIRVNARKLVVEMYPDDPCAKNFSASDRWCRKFAKRHHLSKRRRTSMKKK--SVEDRLPQMKSFHRRLRQLLQXXXXXXXXXXXXXXXXXAAIVPVESSLYGRFSLNA-RFNVDQVGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLMPTAVIFRWKGKVSVVEKAAYYPGVDVLFQENSWTDGPT 352
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5LMB4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMB4_9PHAE) HSP 1 Score: 351 bits (901), Expect = 2.740e-105 Identity = 188/303 (62.05%), Postives = 223/303 (73.60%), Query Frame = 2
Query: 638 PRTFAAEQGRALYCSVMHPAPLRHLGQGLRCALVAGGTIITPP*QG*SGKCFVVRFHRTRGIGHRTTGGTTMFHVPGTCTFELQPRT*VDAVLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAV 1543
P+TFA+EQGR+L+CS +HPAPLRHLG+GLR AL GGT+ TPP G SG+CF V FH + G GH T G ++ V G+C+FELQPRT D D P DGL D + KK +GAE+R Y+N R+ AA+V ELRELE DHAE IW VHG+SC Q+LA KTGIP NI KW KLIAAA +DL++DL K GRERRWFG + KLH LL+RRK KLR STAWI VN +KLV+E YP+D R ++F S+RWCRKFAKRHHLSKRRR +MKNK SV+D L QM SFHR+LRQLLQE V
Sbjct: 38 PKTFASEQGRSLHCSAVHPAPLRHLGRGLRRALATGGTMTTPPWHGYSGRCFHVVFHHSEGGGHTTAAGQKIYDVRGSCSFELQPRTQGDGTSDLPDDGLLSDDELTKRKKRRGAEKRMQYSN-RKKAAMVTELRELEADHAETIWHVHGVSCQQFLARKTGIPQPNICKWNGD--AEKLIAAAANDLKKDLFKTGRERRWFGDAEKKLHSLLLQRRKRKLRVSTAWIGVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLLQEQPV 335
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JLC5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC5_9PHAE) HSP 1 Score: 332 bits (852), Expect = 5.660e-98 Identity = 188/334 (56.29%), Postives = 220/334 (65.87%), Query Frame = 2
Query: 803 FHRTRGIGHRTTGGTTMFHVPGTCTFELQPRT*VDAVLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFM 1801
F G GH T G M+HV G+C+FELQPRT D D P DGL D+ + KKT+GAE+RT Y+N R+ AAVVAELRELE DHAE++W V G+SC Q+LA KTGIP NI KW KLIAAA +DL++DL K GRERRWFG + KLH LL+RRK KLR STAWIRVN +KL++ YP+D R ++ S+RWCRKFAKRHHLSKRRR +MKNK SV+D L Q SFHR+LRQLLQEP + A + VGLA VNG++STWDE A RVQ QPFP LEKRQCTVN IGAGDK M
Sbjct: 4 FTTQEGGGHTTAAGQKMYHVRGSCSFELQPRTQGDGTSDLPDDGLLSDEERTKRKKTRGAEKRTQYSN-RKKAAVVAELRELEADHAEKMWHVQGVSCQQFLARKTGIPQPNICKWNGD--AEKLIAAAANDLKKDLFKTGRERRWFGDAEEKLHSLLLQRRKRKLRVSTAWIRVNARKLLVAMYPDDPRAKNLSASDRWCRKFAKRHHLSKRRRTNMKNK--SVEDRLPQTKSFHRRLRQLLQEPPIRXXXXXXXXXXXGAAI----------------------VGLAFVNGLDSTWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGDKLM 310
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JW43_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW43_9PHAE) HSP 1 Score: 337 bits (863), Expect = 9.310e-98 Identity = 195/388 (50.26%), Postives = 237/388 (61.08%), Query Frame = 2
Query: 638 PRTFAAEQGRALYCSVMHPAPLRHLGQGLRCALVAGGTIITPP*QG*SGKCFVVRFHRTRGIGHRTTGGTTMFHVPGTCTFELQPRT*VDAVLDAPTDGLGPDK*SAQPKKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDLKVGRERRWFGQVDNKLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFM 1801
P+TFA+EQGR+++CS +HPAPLRHLG+GLR AL GGT+ TPP G SG+CF V FH + G GH T G M+HV G+C+FELQPR D D P DGL PD+ + KKT+GAE+RT Y+N R+ AAVVAELRELE +H E+IW VH +SC Q+LA KTGIP NI ++L D + + V R LH+ LL+RR KLR T WIRVN +KLV+E YP+D + F S+RWCRKFAKRHH SKRRR + KNK SV+D L QM FHR+LR LLQEP GLA+VNG++STWDE A RVQ Q F L+KRQCTVN IG GD F+
Sbjct: 216 PKTFASEQGRSVHCSAVHPAPLRHLGRGLRHALATGGTMTTPPRHGYSGRCFHVVFHHSEGGGHTTAAGQEMYHVRGSCSFELQPRIQGDGTSDFPDDGLLPDEERTKRKKTRGAEKRTQYSN-RKKAAVVAELRELEANHTEKIWHVHSVSCQQFLARKTGIPQPNICG------TLRLEERPFQDWQGEEVVRR-------XXXXLHLLLLQRRNRKLRVWTVWIRVNTRKLVVEMYPDDPSAKKFSASDRWCRKFAKRHHFSKRRRTNTKNK--SVEDRLPQMKRFHRRLRHLLQEPPA---------------------------------------GLAIVNGLDSTWDETGALRVQLRQQFRGLDKRQCTVNCCIGGGDNFL 548
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JAM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAM5_9PHAE) HSP 1 Score: 327 bits (839), Expect = 1.220e-96 Identity = 222/485 (45.77%), Postives = 256/485 (52.78%), Query Frame = 1
Query: 1216 GWQREEVVWTSRQQATREAAGATQDKAERVDSLDSCQW*EARDGDVSGRPAFKGFYGVEPMVQEVC*APPPVET*ASPHEKQV*VGEGPSFPDE*FPQEAAPITAGASC*RCRXXXXXXXXPRRGLSGE*PLLRTLQLECCAH*CRPSGARTRERHGVDMGREGSHTSAIFSAFSCP*EASMHRQRLHRSWR*VYDARFRR*RGGVRPRSGRFLPRERMDGQRNE--------ECNTLLRLLPPGLTDDLQPVDAGYERLLKVEVGQELDGWLGQEDNLCLWETNNLSAGKRRIMLTQFIAAAAARIDAPSGYRHRLFENTGSAMTAD*WLDDRVTPECVVGLYNFMDADTSSDEEMSDMGDQDDHSYGGRRGGRVNQAPTMMVMISAMPKTPCHSSTAMMTSTPMRTSS----RCSFRTDFVRCPSPPAKLDRASIKRCLFLRRGLGWFLGQISREANPQTSDIYDYRMVLAYDQSIISVKFPL 2634
G Q EEVV Q++A+ VDSLDS Q +AR +VSGR A + V P+VQEV APP +ET A HE+Q GPS DE PQEAAP AG + R R S LR LQ EC A CRP + V + ++ + F E + +W + GV P L + + Q + ECNTLLRLLPP LTD+LQPVDAGY RLLKVEVG ELD +LG E+NLCLWETN LSAG RRI+ T+FIA A AR+DA GYRHRLFE TG AMTAD LDDR+TPE VVG YNFMD TSSDEEM D D+ GG G + + S S F SPP KLDRA IKRC+FL RG+GWFLGQISR A PQTS YDYR+VLAYDQS I V PL
Sbjct: 122 GRQGEEVVRXXXXXXXXXXXXXAQEEAQSVDSLDSSQREKARGRNVSGRLACNELFSVGPVVQEVREAPPSLETKAHKHEEQA--DGGPSSADEELPQEAAPAAAGTTRSPGRCWGRRREQRRCDRSCGIAPLRALQPEC-AFQCRPDRVHFPRQRQVPAVEKAAYDPGVDVLFQ---ENAWMDGPTCMTWAKHSFLSSMKGEEGVVPEEQSILFADNLHAQTTDDFKKFLHGECNTLLRLLPPKLTDELQPVDAGYGRLLKVEVGNELDEFLGHEENLCLWETNKLSAGARRILFTRFIARAVARMDARPGYRHRLFEKTGLAMTADGSLDDRITPEGVVGAYNFMDGGTSSDEEMPDQDDEVGDDDGGAGAGESSCDSDASXXXXXXXXGDVQDPLSQQESDDNVDSDDDIIAMELPVGFRLQQSPPEKLDRALIKRCVFLTRGMGWFLGQISRAAPPQTSHTYDYRVVLAYDQSTIIVNMPL 600
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JKI0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI0_9PHAE) HSP 1 Score: 323 bits (829), Expect = 5.780e-96 Identity = 192/319 (60.19%), Postives = 219/319 (68.65%), Query Frame = 2
Query: 965 KKTQGAERRT*YTNKRETAAVVAELRELEFDHAERIWRVHGMSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDL-KVGRERRWFGQVDNK-LHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 1888
KKT+G E+RT Y+N++E AAVVAELRELE DHA++IW VHG+SC Q+LA KTGIP NI KW KLIAAA +DL+ DL K G ERRWFG + L LL+ RK KL STAWIRVN +KLVME YP+D R + F S+RWCRKFAKRHH SKRRR +MKNK SV+D L QM SFHR+LRQLLQEP V AAA G AE++ A + PV + YGRFSL+ R VDQVGLA VNG++STWDE A R CTVN IGAGDK M F GEG AAYDPGVDV FQENAWMD T
Sbjct: 57 KKTRGTEKRTQYSNRKE-AAVVAELRELEADHADKIWHVHGVSCQQFLARKTGIPQPNICKWNGD--AEKLIAAAANDLKNDLFKTGIERRWFGDAEKAALDSLLLQPRKRKLGVSTAWIRVNARKLVMEMYPDDPRAKSFSASDRWCRKFAKRHHPSKRRRTNMKNK--SVEDRLPQMKSFHRRLRQLLQEPPVRRAAAGGEAENNGAAIVPVKSPLYGRFSLDA-RFTVDQVGLAFVNGLDSTWDETGALR--------------CTVNCCIGAGDKLMRTAVIFRGEGKVLAVEKAAYDPGVDVLFQENAWMDGPT 355
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5L2Y0_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y0_9PHAE) HSP 1 Score: 216 bits (549), Expect = 4.520e-57 Identity = 128/220 (58.18%), Postives = 146/220 (66.36%), Query Frame = 2
Query: 1256 KLHVKLLERRKTKLRGSTAWIRVNGKKLVMETYPEDLRLRDFMVSNRWCRKFAKRHHLSKRRRAHMKNKYKSVKDHLFQMNSFHRKLRQLLQEPAVSGAAAEGAAESDRAGVFPVNNLCYGRFSLNVVRINVDQVGLALVNGMESTWDEKEATRVQFFQPFPVLEKRQCTVNAYIGAGDKFMMQG--FGGEG-------AAYDPGVDVFFQENAWMDSAT 1888
KLH LL+RRK +LR STAWIR KLV+E YP+D R ++F S+RWC KFAKRHHLSKRRR +MKNK SV+D L QM SF R+LRQLLQE A + PV + YGRFSL R NVDQVGLA+V+G++S WD A RVQ QPFP LEKRQCTVN IGAGD M F G+G AA+DPGVDV FQENAWMD T
Sbjct: 2 KLHSLLLQRRKRELRVSTAWIR----KLVVEMYPDDPRAKNFSASDRWCMKFAKRHHLSKRRRTNMKNK--SVEDRLPQMKSFRRRLRQLLQEXXXXXXXXXXXXXXXXAAIVPVESPLYGRFSLTA-RFNVDQVGLAIVDGLDSKWDGTGALRVQIGQPFPGLEKRQCTVNCCIGAGDNLMRTAVIFRGKGKVSAVEKAAHDPGVDVLFQENAWMDGPT 214
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Match: A0A6H5JUY8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY8_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.530e-55 Identity = 140/309 (45.31%), Postives = 163/309 (52.75%), Query Frame = 1
Query: 1891 ECNTLLRLLPPGLTDDLQPVDAGYERLLKVEVGQELDGWLGQEDNLCLWETNNLSAGKRRIMLTQFIAAAAARIDA-PSGYRHRLFENTGSAMTAD*WLDDRVTPECVVGLYNFMDADTSSDEEMSDMGDQDDHSYGGRRGGRVNQAPT-------MMVMISAMPKTPCHSSTAMMTSTPMRTSSRCSFRTDFVRCPSPPAKLDRASIKRCLFLRRGLGWFLGQISREANPQTSDIYDYRMVLAYDQSIISVKFPLDA*NVDDANTAGRACALID----------GCDESAARRQGNMPRIPNVRNINQ 2763
ECN LLRLLPP LTD+LQPVDAGY RLLK E+G ELD +LG E+NLCL ETN LSAG RRI+ T+FIA A AR+ P R + G + P G + E+ +M DQDD + P R F SPP KLDRA +KRC+FLRRG+GWFLGQISR A PQTS YDYR+VLAYDQS ISVK PLDA +VD+AN A A ALI+ GC+ RRQG+ R PNVRNI+Q
Sbjct: 226 ECNMLLRLLPPKLTDELQPVDAGYGRLLKGEIGNELDEFLGHEENLCLCETNKLSAGARRILFTRFIARAVARMYVRPGPVRQDRTGDDGRRVIG--------RPHHSGGCSWGVQLHGRGQEQCEEMPDQDDEVGDXXXXXXXXXSSCDSXXXXXXXXXXXXXXXDPRXXXXXXXXXXXDRDIIAMELPVGFRLQESPPEKLDRALVKRCVFLRRGMGWFLGQISRAAPPQTSHTYDYRVVLAYDQSTISVKMPLDAYDVDEANAAVGAWALIEPIDDSNEPAGGCEGEQPRRQGSRARTPNVRNIDQ 526 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13121.2256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13121.2256.1 >prot_H-elongata_contig13121.2256.1 ID=prot_H-elongata_contig13121.2256.1|Name=mRNA_H-elongata_contig13121.2256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp MSCPQYLAMKTGIPVSNIFKWQSPHYEVKLIAAATDDLRRDLKVGRERRWback to top mRNA from alignment at H-elongata_contig13121:5066..8239- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13121.2256.1 ID=mRNA_H-elongata_contig13121.2256.1|Name=mRNA_H-elongata_contig13121.2256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3174bp|location=Sequence derived from alignment at H-elongata_contig13121:5066..8239- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13121:5066..8239- >mRNA_H-elongata_contig13121.2256.1 ID=mRNA_H-elongata_contig13121.2256.1|Name=mRNA_H-elongata_contig13121.2256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig13121:5066..8239- (Himanthalia elongata Himel1 dioecious)back to top |