prot_H-elongata_contig13121.2255.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13121.2255.1
Unique Nameprot_H-elongata_contig13121.2255.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
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BLAST of mRNA_H-elongata_contig13121.2255.1 vs. uniprot
Match: D8LNW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW4_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.180e-14
Identity = 49/105 (46.67%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:   75 ALASDADDVDPGAGDGIFGGILKTLDTVNQQSYYQALALNKDLEDKGVLPRLERKPGLPG---------------EGAANATDSESRRNPAELLADVEDSSRGGG 164
            A  +   +V P  G G+F G+ +TL+ VN+QSYYQALALNK+LEDKGVLP LER PG PG               E AA AT  +         ADV  +S+GGG
Sbjct:  169 AAGATEQEVGPAPGRGMFAGVKETLEAVNKQSYYQALALNKELEDKGVLPPLERTPGPPGGEEEVAIAEERSEAPESAAGATAVQGEAETVASPADV--ASQGGG 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13121.2255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNW4_ECTSI2.180e-1446.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13121contigH-elongata_contig13121:2840..3334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13121.2255.1mRNA_H-elongata_contig13121.2255.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13121 2025..4903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13121.2255.1 ID=prot_H-elongata_contig13121.2255.1|Name=mRNA_H-elongata_contig13121.2255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MEKRVEEESRVPNRASRRLDKKGARKKQQQPKGGIRAHKTATAPAVTPRE
KLRMSSAGEDESNSDVSPGSQMLPALASDADDVDPGAGDGIFGGILKTLD
TVNQQSYYQALALNKDLEDKGVLPRLERKPGLPGEGAANATDSESRRNPA
ELLADVEDSSRGGG*
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