prot_H-elongata_contig131111.2252.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: D8LIC3_ECTSI (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC3_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 1.560e-18 Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 0
Query: 1 MQGYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
+QGYLRGHGTY+EEG +G PP+L+ACVAGVVERVNKLISVRPIKSR
Sbjct: 18 VQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSR 63
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A6H5KMR3_9PHAE (Ribosomal RNA-processing protein 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR3_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 2.220e-18 Identity = 39/46 (84.78%), Postives = 44/46 (95.65%), Query Frame = 0
Query: 1 MQGYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
+QGYLRGHGTY+EEG +G PP+L+ACVAGVVERVNKLISVRPIKSR
Sbjct: 18 VQGYLRGHGTYVEEGTDGGPPKLLACVAGVVERVNKLISVRPIKSR 63
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A836CMW4_9STRA (Ribosomal RNA-processing protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.350e-14 Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 0
Query: 3 GYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
G+LRGHGTY++E +G P+L+ACVAGVVERVNKLISVRP+KSR
Sbjct: 16 GFLRGHGTYIQESEDGGEPQLIACVAGVVERVNKLISVRPVKSR 59
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: UPI000B8E21E9 (exosome complex component RRP4 isoform X2 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=UPI000B8E21E9) HSP 1 Score: 59.7 bits (143), Expect = 3.880e-9 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
Query: 1 MQGYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
M G++RGHGTY+EE A L A VAGVVE+VNKLISVRPIK+R
Sbjct: 37 MSGFMRGHGTYMEEDA------LTASVAGVVEQVNKLISVRPIKNR 76
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A067RDM3_ZOONE (Ribosomal RNA-processing protein 4 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RDM3_ZOONE) HSP 1 Score: 59.7 bits (143), Expect = 4.200e-9 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
Query: 1 MQGYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
M G++RGHGTY+EE A L A VAGVVE+VNKLISVRPIK+R
Sbjct: 37 MSGFMRGHGTYMEEDA------LTASVAGVVEQVNKLISVRPIKNR 76
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: F2U1Z1_SALR5 (Ribosomal RNA-processing protein 4 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1Z1_SALR5) HSP 1 Score: 58.5 bits (140), Expect = 1.070e-8 Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
Query: 2 QGYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
QGY+RGHGT++ +G RL+A VAGVVERVNK+ISVRP+++R
Sbjct: 47 QGYMRGHGTFIHDG------RLLASVAGVVERVNKVISVRPVRTR 85
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A7S0Y5B4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y5B4_HEMAN) HSP 1 Score: 55.8 bits (133), Expect = 2.700e-8 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 3 GYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
G+LRGHGTY+++G GE LVA VAGVV+RVNKL+SV P+KSR
Sbjct: 16 GFLRGHGTYVKDG--GET--LVASVAGVVQRVNKLVSVIPVKSR 55
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: UPI0006B10691 (exosome complex component RRP4-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B10691) HSP 1 Score: 57.4 bits (137), Expect = 2.710e-8 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 3 GYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
G++RGHGTY+EE LVA VAG+VERVNKL+SVRP+K+R
Sbjct: 36 GFMRGHGTYVEE------ENLVASVAGIVERVNKLVSVRPLKTR 73
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A2J7RGE7_9NEOP (Ribosomal RNA-processing protein 4 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RGE7_9NEOP) HSP 1 Score: 57.4 bits (137), Expect = 2.760e-8 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 3 GYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
G++RGHGTY+EE A L A VAGVVE+VNKLISVRPIK+R
Sbjct: 39 GFMRGHGTYMEEDA------LTASVAGVVEQVNKLISVRPIKNR 76
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Match: A0A7M7K2I4_VARDE (Ribosomal RNA-processing protein 4 n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7K2I4_VARDE) HSP 1 Score: 56.6 bits (135), Expect = 5.190e-8 Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query: 3 GYLRGHGTYLEEGANGEPPRLVACVAGVVERVNKLISVRPIKSR 46
GY+RGHGTYLEE + L++ VAGVVE+VNKLI+VRP+K+R
Sbjct: 42 GYMRGHGTYLEEESG-----LLSAVAGVVEKVNKLITVRPLKTR 80 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig131111.2252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig131111.2252.1 ID=prot_H-elongata_contig131111.2252.1|Name=mRNA_H-elongata_contig131111.2252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bpback to top |