prot_H-elongata_contig130804.2229.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130804.2229.1
Unique Nameprot_H-elongata_contig130804.2229.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 9.610e-55
Identity = 97/125 (77.60%), Postives = 108/125 (86.40%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QVSYHTRNLLCVL+LH+GPILSL V E  A+T S DK+LR+WPLDFSDFLMEAAHES V S C S DGLKLA+GTA GSI VLDVMTHGY TALRSH+ GVTAAAIDP +ER++FAT SEDCT+R
Sbjct:  903 QVSYHTRNLLCVLQLHNGPILSLEVNEDHAITGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCFSKDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 1027          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A835YLQ5_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 9.510e-36
Identity = 75/125 (60.00%), Postives = 87/125 (69.60%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QV Y +R LLCVLRLH GPI +L V  G A T S D  LRLWPLDF+D+LMEA HE+ V +   S DGL+LA+GT  GS+GVLDV+TH Y+T LRSH+  V A A DPC  R E AT   D TVR
Sbjct:  735 QVDYESRALLCVLRLHSGPIRALAVHAGFAATASDDGWLRLWPLDFNDYLMEAKHEAPVTAIALSADGLRLAVGTDSGSLGVLDVVTHKYSTLLRSHRGAVAAIACDPC--RGEAATVGADGTVR 857          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: F0Y7G3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7G3_AURAN)

HSP 1 Score: 122 bits (306), Expect = 7.850e-30
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            Q+SY  R LLCVLRLHDGPI  +  T G  +T S D  +RLWPLDFSD+LMEA HE+ V     + DGLK+A GT+ GS+GVLDV  HGY+T +RSH   V   A    D    FAT  +D T+R
Sbjct:  162 QLSYAQRALLCVLRLHDGPIRRVDATPGYVVTASDDCYVRLWPLDFSDYLMEAKHEAPVVDVAVAPDGLKIACGTSRGSLGVLDVSAHGYSTLVRSHVGAVFDVAH--ADVGGRFATCGKDGTIR 284          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: L1JQ90_GUITC (DUF667 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ90_GUITC)

HSP 1 Score: 119 bits (299), Expect = 7.080e-29
Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            Q+++  RN+  + RLHD  I S+VVT+G  +T S D+ LR+WPLDFSD+ +EA H + V +   S D L++AIGTA G+IG++DV THGY T +RSH++ V A A+DP     EF T + D T+R
Sbjct:  527 QINFTNRNIDQIYRLHDDSINSVVVTDGFCVTGSEDRFLRVWPLDFSDYFLEAEHAAPVNALAVSSDCLRIAIGTANGTIGIMDVPTHGYRTVVRSHESVVLALAMDP--HNREFTTTASDGTIR 649          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A8J4ESL9_9CHLO (DUF667 domain-containing protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4ESL9_9CHLO)

HSP 1 Score: 117 bits (294), Expect = 3.360e-28
Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QV Y TRNL C+ +LH   I  L+V +G A+T   D+LLR WPLDF D+L+EA HE AV     S D L++AIGT  G++G L +  H Y T LRSH   V A A+DP   R+ F T S D T+R
Sbjct:  659 QVDYTTRNLDCIYQLHSAAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGAVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGAVNAVAVDP--NRDHFCTVSTDGTLR 781          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: D8TH40_VOLCA (Bromo domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TH40_VOLCA)

HSP 1 Score: 115 bits (289), Expect = 1.600e-27
Identity = 61/125 (48.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QV Y TRNL C+ +LH   I  L+V +G A+T   D+LLR WPLDF D+L+EA HE +V     S D L++AIGT  G++G L +  H Y T LRSH   V A A+DP   R+ F T S D T+R
Sbjct: 1216 QVDYTTRNLDCIYQLHASAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGSVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGSVNAVAVDP--NRDHFCTVSTDGTLR 1338          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A7S4E3P8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.900e-27
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QVSY  R+LLCVL+LHDGPI  +  T G  +T + D  +RLWP  F+DFLMEA H++ V S   + DGL++A GT+ G++GVLDV +H Y T +R+H    T A +D      +FAT   D TVR
Sbjct:  502 QVSYAQRSLLCVLKLHDGPIRGVAATPGYVVTAADDGYVRLWPPGFADFLMEAKHDAPVVSISVAPDGLRVACGTSRGALGVLDVASHKYGTLVRAH----TGAILDIACTSGKFATCGADATVR 622          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A0L0D4U4_THETB (WD repeat-containing protein 90 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4U4_THETB)

HSP 1 Score: 115 bits (287), Expect = 2.940e-27
Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            Q++Y T  L  + +LH+GPI SL V +G  ++ S D  LR+WPLDFSDF +EA HESAV S   S D LK+  GTA GS+G LD++T  + T LRSH AGV   A+ P D+   FAT + D +VR
Sbjct:  606 QIAYSTVELEAIYQLHNGPIRSLSVVDGYCVSGSDDGFLRVWPLDFSDFFLEAEHESAVTSVAISYDCLKILCGTAAGSLGALDILTQSFTTFLRSHTAGVHDLAVSPKDD--SFATVAGDGSVR 728          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A250WPV0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPV0_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 2.940e-27
Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            +++Y TR LLCV +LH   I SLVV +   +T S DKLLR+WP+DFSDFLMEA HE++V S   + DGL++ IGT  G++G+LD+ T  Y T LRSH   V   AID      ++ T S D ++R
Sbjct:  499 EINYRTRALLCVYQLHSSAINSLVVHDSFCVTGSDDKLLRVWPMDFSDFLMEADHEASVTSVGVAKDGLRVCIGTESGALGILDIPTQRYRTLLRSHTGTVMGVAID--HNSSQYCTVSTDGSIR 621          
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A2J8A864_9CHLO (WD repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A864_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 7.490e-27
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 125
            QV Y TRNL C+ +LH   I  L++ +G A+T   D+LLR WPLDF D+L+EA HE +V     S D L++ +GT  G +G L +  H Y+T LRSH   V A A DP   R++F T S D T+R
Sbjct:  655 QVDYTTRNLDCIYQLHSAAITCLLIADGLALTGGEDRLLRAWPLDFRDYLLEAEHEGSVTGLALSPDALRVVVGTENGVLGCLQIPNHSYSTLLRSHCGPVNAVAADP--SRDQFCTVSSDGTLR 777          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNU2_9PHAE9.610e-5577.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLQ5_9STRA9.510e-3660.00DUF667 domain-containing protein n=1 Tax=Tribonema... [more]
F0Y7G3_AURAN7.850e-3053.60Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
L1JQ90_GUITC7.080e-2948.80DUF667 domain-containing protein n=1 Tax=Guillardi... [more]
A0A8J4ESL9_9CHLO3.360e-2849.60DUF667 domain-containing protein n=5 Tax=Volvox Ta... [more]
D8TH40_VOLCA1.600e-2748.80Bromo domain-containing protein n=1 Tax=Volvox car... [more]
A0A7S4E3P8_9STRA2.900e-2748.80Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A0L0D4U4_THETB2.940e-2750.40WD repeat-containing protein 90 n=1 Tax=Thecamonas... [more]
A0A250WPV0_9CHLO2.940e-2748.80Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A2J8A864_9CHLO7.490e-2746.40WD repeat domain-containing protein n=1 Tax=Tetrab... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..43
e-value: 0.4
score: 19.5
coord: 87..123
e-value: 150.0
score: 3.3
coord: 46..84
e-value: 37.0
score: 7.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..125
e-value: 3.3E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 1..125
NoneNo IPR availablePANTHERPTHR13720:SF44coord: 1..125
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 52..125
score: 10.627
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130804contigH-elongata_contig130804:324..1370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130804.2229.1mRNA_H-elongata_contig130804.2229.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130804 324..1370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130804.2229.1 ID=prot_H-elongata_contig130804.2229.1|Name=mRNA_H-elongata_contig130804.2229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFL
MEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAG
VTAAAIDPCDEREEFATASEDCTVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf