mRNA_H-elongata_contig130689.2223.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI) HSP 1 Score: 243 bits (619), Expect = 4.140e-78 Identity = 125/155 (80.65%), Postives = 140/155 (90.32%), Query Frame = 1
Query: 1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDD-GRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
QYQPRVSGYWN LKVYF VDN YV++KLK+LL ++KKDW+RLPSEDEVKDD GRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG+AAA +SD TFSPEVLTEVTSSCIVT LL+VLLIRL LYLLNSPAVVLDLV+YTGY+ V L ++
Sbjct: 86 QYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAA-LSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCIN 239
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE) HSP 1 Score: 246 bits (627), Expect = 1.020e-77 Identity = 123/154 (79.87%), Postives = 140/154 (90.91%), Query Frame = 1
Query: 1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
QYQPRVSGYWN LKVYF VDN YV++KLK+LL +++KDW+RLPSEDEVKDDGRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG+AAA +SD TFSPEVLTEVTSSCIVT LL+VLLIRL LYLLNSPAVVLDL++YTGY+ V L ++
Sbjct: 213 QYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAA-LSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCIN 365
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.110e-47 Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDE-VKDDGRP--KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
+YQP VSG+W LK YF VDN YV+RK K+LL P++KK W+R+P+E+ DG KF RP D NAPDLY+PLM+FIT L++G+ KG A + F+PEVL EVTSS +V LL+VLL+RL LYLL +PA +LDLV++TGY+ V L ++
Sbjct: 19 RYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRA--------SNFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCIN 167
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.440e-37 Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 1
Query: 1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDG----------------------RPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
+Y P V+ W+ LK YF V++ YV RKL L+FP K+ W R ++KD G RP+++ P+ D NAPDLY+PLM+F+T+VLVTGYAKG N+F+PEVL EVTSSC+V LL++ +IRL LYLL +PA +LDL++ TGY+ V L+ +
Sbjct: 127 RYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRR-----QMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK--------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFN 289
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A024GGU5_9STRA (Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU5_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.710e-33 Identity = 67/150 (44.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 453
Y P G W LK YF VDN YV +LKILLFP K+W R+ + D + K+ PI D+NAPDLY+PLM F+T++L+ GY KGA+ N FSP+V+ S C+V L++V ++ LYLLNS LDL++++GY+ L
Sbjct: 99 YIPGAYGVWGRLKHYFTVDNNYVKNRLKILLFPFWHKNWRRI---GDTTDPNQNKYAPPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLIEVAILASFLYLLNSSVSFLDLIAFSGYKYTSL 237
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: F0WGG6_9STRA (Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGG6_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.950e-33 Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 453
Y P G W LK YF VDN YV +LKILLFP K+W RL + D K+ PI D+NAPDLY+PLM F+T++L+ GY KGA+ N FSP+V+ S C+V LL+V ++ LYLLNS LDL++++GY+ L
Sbjct: 179 YIPGAYGVWERLKHYFTVDNNYVKNRLKILLFPFWHKNWRRL---GDTTDPNYNKYAAPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLLEVAILASFLYLLNSSVSFLDLIAFSGYKYTSL 317
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A8K1CBU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBU8_PYTOL) HSP 1 Score: 129 bits (325), Expect = 4.440e-33 Identity = 67/151 (44.37%), Postives = 97/151 (64.24%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 453
Y P G W +LK YF V+N YV +LK+LLFP ++W R+ +E DG+P ++ P D+NAPDLY+PLM F+T++L+ GY KGA+ N FSP+V+ S C+V L+++ ++ LYLLNS LDLVS++GY+ +PL
Sbjct: 185 YLPGAYGVWGSLKYYFTVNNSYVKSRLKMLLFPFWHRNWRRMGTEST---DGKPNQYAPPSRDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGRDASYCLVMQLVEIGVLAACLYLLNSSISFLDLVSFSGYKYIPL 324
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A0P1AQ40_PLAHL (Protein YIF1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ40_PLAHL) HSP 1 Score: 128 bits (322), Expect = 8.570e-33 Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
Y P G W NLK YF V+N YV +LK+LL P K W R + ++ DD +P ++ P D NAPDLY+PLM F+T++L+ GY+KG + N FSP+V+T+ S C+V L+++ ++ LY+LNS LDLVS++GY+ +PL ++
Sbjct: 163 YLPGAYGVWGNLKYYFTVNNSYVKSRLKMLLLPFRHKTWRRFGNGEQ--DDSKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 306
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A421H1I6_9STRA (Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1I6_9STRA) HSP 1 Score: 128 bits (322), Expect = 8.870e-33 Identity = 65/154 (42.21%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
Y P G W ++K YF V+N YV +LKILL P K+W R+ + D+ D+ +P ++ P D NAPDLY+PLM F+T++L+ GY+KG + N FSP+V+T+ S C+V L+++ ++ LY+LNS LDLVS++GY+ +PL ++
Sbjct: 184 YLPGAYGIWGSIKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGDQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 327
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A2P4YJM1_9STRA (Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YJM1_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.320e-32 Identity = 65/154 (42.21%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 4 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 462
Y P G W +LK YF V+N YV +LKILL P K+W R+ + ++ D+ +P ++ P D NAPDLY+PLM F+T++L+ GY+KG + N FSP+V+T+ S C+V L+++ ++ LY+LNS LDLVS++GY+ +PL ++
Sbjct: 140 YLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig130689.2223.1 >prot_H-elongata_contig130689.2223.1 ID=prot_H-elongata_contig130689.2223.1|Name=mRNA_H-elongata_contig130689.2223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKback to top mRNA from alignment at H-elongata_contig130689:283..1594+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig130689.2223.1 ID=mRNA_H-elongata_contig130689.2223.1|Name=mRNA_H-elongata_contig130689.2223.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-elongata_contig130689:283..1594+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig130689:283..1594+ >mRNA_H-elongata_contig130689.2223.1 ID=mRNA_H-elongata_contig130689.2223.1|Name=mRNA_H-elongata_contig130689.2223.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig130689:283..1594+ (Himanthalia elongata Himel1 dioecious)back to top |