prot_H-elongata_contig13061.2219.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig13061.2219.1
Unique Name	prot_H-elongata_contig13061.2219.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	106

Homology

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.420e-52
Identity = 82/105 (78.10%), Postives = 87/105 (82.86%), Query Frame = 0

Query:    1 MNGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            M GE  K RVAH+CSFDAETDTI+LWGGFTS+LSRLQDFFGFHCPTATWV++ EE    PVA GAT L   PP  AFHSAAFFQG LYVFSGANGDVRY DVWRF
Sbjct:  253 MKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRF 357

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.550e-32
Identity = 62/111 (55.86%), Postives = 74/111 (66.67%), Query Frame = 0

Query:    2 NGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALAN-------VPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            +G+  K RVAH+C +DA T TIFLWGGFTS+LSRLQDF+  HC TATW      ++   V SG             +PP  AFH+A FF+ ALYVFSGANGDVRY DVWR+
Sbjct:  239 SGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAA--AALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRY 347

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.580e-30
Identity = 63/113 (55.75%), Postives = 69/113 (61.06%), Query Frame = 0

Query:    1 MNGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANV--------PPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            M GE  + RVAH+CSFD  T TI+LWGGFT +LSRLQDFF +    A W +I      TP A  A   A          P   AFHSA F  GALYVFSGANGDVRY DVWRF
Sbjct:  247 MGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIK-----TPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRF 354

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.640e-29
Identity = 56/104 (53.85%), Postives = 66/104 (63.46%), Query Frame = 0

Query:    2 NGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            +GE  + RVAHTCSFD  TDTI +WGGF+S L RLQDF   HC TATW                T  +N PP  AFH+A F +GALY+F GA+GD RY DVWR+
Sbjct:  241 SGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---------------TETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRY 329

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.600e-28
Identity = 57/112 (50.89%), Postives = 67/112 (59.82%), Query Frame = 0

Query:    3 GEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALAN---------VPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            G   + RVAH+CSFD ET TI+LWGGFT +LSRLQDF+ +H PT  W +I                            P   AFHSA F++GALYVFSGANGDVRY DVWR+
Sbjct:  254 GAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRY 365

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.740e-27
Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 0

Query:    1 MNGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            M G+  K RVAH+CSFD     I+LWGGFT +LSRL DF+ ++C +A W ++        V  G  A    PP  AFHSA F  GALY+FSGANGD+RY DVWR+
Sbjct:  250 MKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRL--------VMEGGDAS---PPARAFHSAVFHDGALYLFSGANGDIRYNDVWRY 343

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A7S2V473_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V473_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.700e-18
Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 0

Query:    3 GEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            G+  +DRVAHTC  D  T  IFLWGGFTS L RLQD +     +  W      S+ TP           P   AFH++  + G++++F GANG+ R+ D+W +
Sbjct:  123 GKIPQDRVAHTCVLDENTGQIFLWGGFTSSLERLQDLYVLDFGSMKW-----GSISTPK--------EKPSCRAFHASCIYNGSMFIFGGANGERRHSDIWEY 212

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A836CI07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI07_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.750e-15
Identity = 41/103 (39.81%), Postives = 52/103 (50.49%), Query Frame = 0

Query:    3 GEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            G+    R AH C FDA +  I+ +GGF   ++R  D   +   T     I+                NVPP  AFH+A  + GALYV  GA+GDVRY DVWRF
Sbjct:  221 GKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHAN--------------NVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRF 309

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A7S2UZD9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.990e-14
Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 0

Query:    9 RVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKI---NEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            R AH+C  D +   +++WGG++  L RL D +     +  W ++     E  P P A              FH + FF+GA+Y+F G++G+ R+CDVWR+
Sbjct:  284 RTAHSCVVDDKMQRLYVWGGYSGSLKRLDDGYMLDLQSNMWTQLFSFTNEVTPAPRA--------------FHCSCFFEGAIYIFGGSDGESRHCDVWRY 369

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BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.510e-14
Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0

Query:    7 KDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWVKINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYCDVWRF 105
            K RVAH   +D  ++ I++WGGFTS L RL DFF     +  W  ++E++    +      + + P   AFH A F+  ++Y+F GA+G  R+ D+W++
Sbjct:  246 KGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEKN--GWMEKNDRQMKSGPCPRAFHGAFFYDSSMYIFGGADGQNRHEDMWKY 342

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot

BLAST of mRNA_H-elongata_contig13061.2219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7FP90_ECTSI	1.420e-52	78.10	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CEB6_9STRA	2.550e-32	55.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CQE2_9STRA	3.580e-30	55.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z314_9STRA	3.640e-29	53.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZFC9_9STRA	1.600e-28	50.89	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FP81_ECTSI	1.740e-27	52.38	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2V473_9STRA	7.700e-18	39.81	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CI07_9STRA	7.750e-15	39.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2UZD9_9STRA	4.990e-14	33.00	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2V4S9_9STRA	6.510e-14	35.35	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 7..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig13061	contig	H-elongata_contig13061:2503..2820 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig13061.2219.1	mRNA_H-elongata_contig13061.2219.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig13061 1975..2820 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig13061.2219.1 ID=prot_H-elongata_contig13061.2219.1|Name=mRNA_H-elongata_contig13061.2219.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MNGEPRKDRVAHTCSFDAETDTIFLWGGFTSDLSRLQDFFGFHCPTATWV
KINEESVPTPVASGATALANVPPVWAFHSAAFFQGALYVFSGANGDVRYC
DVWRF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller