prot_H-elongata_contig10252.221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10252.221.1
Unique Nameprot_H-elongata_contig10252.221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: D7FVR1_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR1_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.930e-84
Identity = 143/195 (73.33%), Postives = 164/195 (84.10%), Query Frame = 0
Query:    1 TDGPRVLCTEFDPDTTVIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGVDPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSKIS 195
            TDGPRV C EFDPDTTVIKAS Q  Y+ DQ T EN V+MF D+R+AVD VDP RDT+AYS +F + SQYLY+WQ+  WV+GGG + V VI+ VLQGSL ISLLMA +I+MVVLQVFGFL LL+VG+NGF+IVNLCVMVGLVVEFTAHIGRGFLF  G +RD+RV + LT+LLWPTFAGACTTF AVLPL FSKIS
Sbjct:  811 TDGPRVDCAEFDPDTTVIKASQQLLYVHDQTTRENNVKMFRDMREAVDSVDPDRDTFAYSDTFALQSQYLYSWQMLFWVVGGGAVMVAVIIAVLQGSLTISLLMAGTIIMVVLQVFGFLTLLDVGLNGFTIVNLCVMVGLVVEFTAHIGRGFLFTAGDNRDDRVAQTLTELLWPTFAGACTTFFAVLPLTFSKIS 1005          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: A9V563_MONBE (Patched-like protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V563_MONBE)

HSP 1 Score: 99.4 bits (246), Expect = 1.160e-20
Identity = 71/207 (34.30%), Postives = 111/207 (53.62%), Query Frame = 0
Query:    2 DGPRVLC-----TEFDPD--TTVIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGV--------DPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            DG    C     TE DPD  T  + ++   FYL +  + +N +    D RD VD V        DP  +T+     ++   QYL +++    V+G  +  +    FVLQ SL+ SLL+  +I++V ++V GFLPLL + +N FS  N+ + +G+ +EFT+HI   FL   G +R +R+  AL  +  P   GA ++ LAVL +A S+
Sbjct: 1222 DGVHTSCFDIVGTESDPDFPTITLYSTRGTFYLQNLDSTDNFLDAIEDTRDRVDEVLDEYDDSSDPEFETFVIGYPYIYWEQYLTSFEDLFTVVGLSLAGIFAATFVLQCSLVTSLLLCLTILVVGIEVLGFLPLLNLEVNAFSSTNVILSLGMSIEFTSHIAHEFLVEQGEERTDRIVRALRFMGQPMLHGAVSSILAVLFIAGSQ 1428          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: A0A7S0L2J5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2J5_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 3.200e-17
Identity = 62/193 (32.12%), Postives = 108/193 (55.96%), Query Frame = 0
Query:    6 VLCTEFDPDTTV-IKASLQNFYLLDQGTVENKVRMFNDLRDAVDGVDPTRDTYAYSKSFVINSQYLYT----WQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            V+CT+++    V + A+  + Y  +    ++ + +  D R  VD +DP  ++Y Y   +    QY+      ++I GW + G  +  ++  F    S I S+L+   I+ V+++V+GF+ +L + +N FS+VNL + VGL VEFTAH+   FL A G   D R+  A+ +++ P   G  ++FLAV+ L F+K
Sbjct:  650 VVCTKYEATNDVKLDAAASSIYTKNLLDDDDFIAVIKDGRKRVDAIDPN-NSYMYGYVYQYWDQYVNIETNLYKIVGWALLGCFLATLIFQF----SPITSILVTLVILKVIIEVYGFIYVLGIKLNAFSLVNLTMSVGLAVEFTAHVSHVFLMAKGTKND-RMASAVMEMMAPMANGFASSFLAVVALGFAK 836          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: F2UAQ0_SALR5 (SSD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UAQ0_SALR5)

HSP 1 Score: 79.3 bits (194), Expect = 9.960e-14
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   45 DAVDGVD-PTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            DA D  D P   ++  S   +   QYL++++    V+G  ++ + V  F+ Q S I SLL+   I +V L+V+  LP L + +N FS  NLC+ +G+ VEFTAH+   FL   G  R +RV+  L  +  P F GA ++ +AVL +  S+
Sbjct: 1352 DAYDNEDDPDYRSFVISYVHIFWEQYLHSYRDLYVVVGLCLLGIFVATFLFQFSFITSLLLCIVIFIVDLEVYALLPALGLTLNAFSTTNLCLAIGMAVEFTAHVAHQFLTEAGESRPQRVRATLRFMGTPLFNGAMSSLIAVLFIVGSR 1501          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.330e-13
Identity = 53/181 (29.28%), Postives = 94/181 (51.93%), Query Frame = 0
Query:   14 DTTVIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGVDPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHG-VDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            D  +IK S  + YL++    EN V    D R+  D        +AYS  FV + Q++  +       G  ++ V+ +   + G + I LL+  ++V++ +++ GF+    + +N  +++ L + VGLVV++  HI   FL     + +D R+ EAL ++      GA TTFL ++PLAF+ 
Sbjct:  683 DEGLIKISRSDMYLVNLVDTENNVDALRDTREVADQSTLDPQPFAYSGVFVFSEQFVVIYNELLSSFGLALLAVLALSLFVLGKVTIVLLVCLTLVVIDVELLGFVYHWNLDVNSITVIELIMAVGLVVDYMVHIVHYFLHQDPRIPKDARIAEALGEIGPSVMVGAATTFLGIMPLAFAN 863          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: F2TWB0_SALR5 (SSD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWB0_SALR5)

HSP 1 Score: 77.4 bits (189), Expect = 4.590e-13
Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 0
Query:   49 GVDPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFS 192
            G D   +TYA      I  QYL++ +    ++G  V+ V +   VLQ + + S+++   ++M V++V+G LP+ +V  N FS+VNLC+ VG+ +EFTAHI   FL   G  R  RV+ AL  +    F GA ++ L  L +A S
Sbjct: 1335 GNDTKYNTYATGYVHFIWEQYLHSEENLYLIVGLCVVGVFIATLVLQFNPLASVILCVIVLMAVIEVYGLLPIWDVRNNAFSLVNLCLSVGMGIEFTAHITHQFLAERGESRVLRVRNALGFMGTAMFHGAVSSILTTLFIAGS 1478          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: A0A1C7NGI0_9FUNG (Niemann-Pick type C-related protein 1 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NGI0_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 3.820e-12
Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = 0
Query:   55 DTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAG-ACTTFLAVLPLAFSK 193
            + Y YS  +V   QY Y   +   ++G  ++++  +   L GSL   L++ + +VM+++ V G + L  V +NG S+VNL + VG+ VEF  HI RGF+ A G  R++R  +++ D+    F G   T F  ++ LAF++
Sbjct: 1065 EVYPYSVFYVFFEQYRYIAALAFEILGLAIVSIFAVTSCLLGSLQCGLIVMSVVVMILVDVVGAMTLWGVSLNGVSLVNLVICVGISVEFCCHIARGFMVASGT-REDRAGKSMVDVGSSVFCGITLTKFAGIIVLAFTR 1203          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: A0A6H5JGQ4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.110e-11
Identity = 54/178 (30.34%), Postives = 86/178 (48.31%), Query Frame = 0
Query:   17 VIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGVDPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAH-GVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            V + S    YL++    +NKV    D R+  D        +AYS  F+   QYL  +       G  ++ V+V+   + G +II +           ++ GF+    + MNG + + L + VGLVV++  HI   FL     + +D R+ EAL ++     AGA TTFL ++PLAF+ 
Sbjct:  319 VSQISRSEMYLINLVDTDNKVDTLEDKREVADQSTLDPQAFAYSDMFLFAEQYLAIYNELLSSFGLALLAVLVLSLFVLGKVIIDV-----------ELLGFVYHWNLDMNGITAIELIMAVGLVVDYMVHIVHYFLHQDPSIPKDARIAEALGEIGPSVMAGAATTFLGIMPLAFAN 485          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: UPI000D1C8382 (protein patched homolog 2-like isoform X1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C8382)

HSP 1 Score: 71.6 bits (174), Expect = 4.320e-11
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    9 TEFDPDTTVIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGVDPT---RDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSK 193
            T F P+  V       F        E  +RM    R   D ++        Y Y   F+   QYL++ +    V+G  ++ V V + + Q S++IS L+   ++MV L+V+GF+ ++   +N  S+VNL +++G+  E T ++ R FL   G  R+ RV +AL   L P   G  T  +A LPL F K
Sbjct:  873 TTFKPNLRVAATKTSIFIEHLGAETEPNLRMIRQTRKIADQMNAEIGENVAYVYGYPFLFFEQYLHSSRNLYIVVGFALLGVFVAVLIFQFSIVISFLIVIVLLMVDLEVYGFIYVIGAKLNSLSLVNLGIVIGMAAELT-YLARAFLMVEGT-RNYRVGKALEWTLEPLLHGFGTQVVATLPLVFLK 1058          
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Match: A0A225AUQ3_9EURO (SSD domain-containing protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225AUQ3_9EURO)

HSP 1 Score: 70.9 bits (172), Expect = 8.070e-11
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   55 DTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLIISLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGRGFLFA--HGVDR-------DERVKEALTDLLWPTFAGACTT-FLAVLPLAFSK 193
            D + YSK ++   QY    ++ G ++G  +  + V+  +L GSL    ++AT++VM+V+ + G + +  V +N  S+VNL + VG+ VEF AHI R F+F   + +DR       D R   AL ++    F+G   T  L V  LAF++
Sbjct: 1051 DIFPYSKFYIFFDQYASIVRLTGTLLGAAIGIIFVVSSILLGSLATGAVIATTVVMIVVDIIGTMAVAGVSLNAVSLVNLVICVGIGVEFCAHIARAFMFPSRNMLDRSPKLRGKDARAWTALVNVGGSVFSGITVTKLLGVCVLAFTR 1199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10252.221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR1_ECTSI1.930e-8473.33SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A9V563_MONBE1.160e-2034.30Patched-like protein n=1 Tax=Monosiga brevicollis ... [more]
A0A7S0L2J5_9EUKA3.200e-1732.12Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
F2UAQ0_SALR59.960e-1436.00SSD domain-containing protein n=1 Tax=Salpingoeca ... [more]
D7FY89_ECTSI2.330e-1329.28Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
F2TWB0_SALR54.590e-1336.81SSD domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A1C7NGI0_9FUNG3.820e-1233.57Niemann-Pick type C-related protein 1 n=1 Tax=Choa... [more]
A0A6H5JGQ4_9PHAE1.110e-1130.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI000D1C83824.320e-1130.85protein patched homolog 2-like isoform X1 n=5 Tax=... [more]
A0A225AUQ3_9EURO8.070e-1133.56SSD domain-containing protein n=1 Tax=Talaromyces ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10coord: 71..195
e-value: 1.5E-9
score: 39.4
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 16..193
NoneNo IPR availablePANTHERPTHR10796:SF92PATCHED-RELATED, ISOFORM Acoord: 16..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..130
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 36..193
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
IPR003392Protein patched/dispatchedPFAMPF02460Patchedcoord: 24..191
e-value: 3.3E-20
score: 71.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10252contigH-elongata_contig10252:74..6074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10252.221.1mRNA_H-elongata_contig10252.221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10252 74..6074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10252.221.1 ID=prot_H-elongata_contig10252.221.1|Name=mRNA_H-elongata_contig10252.221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
TDGPRVLCTEFDPDTTVIKASLQNFYLLDQGTVENKVRMFNDLRDAVDGV
DPTRDTYAYSKSFVINSQYLYTWQIFGWVIGGGVITVVVIMFVLQGSLII
SLLMATSIVMVVLQVFGFLPLLEVGMNGFSIVNLCVMVGLVVEFTAHIGR
GFLFAHGVDRDERVKEALTDLLWPTFAGACTTFLAVLPLAFSKISL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003392Ptc/Disp