mRNA_H-elongata_contig130071.2194.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: B1N8E9_9PHAE (Glutathione S-transferase 4 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E9_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.440e-8 Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 10 PVTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSEFKHLPVMQV 159
P YF P R EA R+AL + G+++EDKR++ +EF + EFK LPV Q+
Sbjct: 2 PAVFNYFGIPARGEATRVALAVAGVDYEDKRMSFEEFGACEFKTLPVYQM 51
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: W2MMI6_PHYPR (GST N-terminal domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MMI6_PHYPR) HSP 1 Score: 53.9 bits (128), Expect = 5.310e-8 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 13 VTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEF---KSS-EFKHLPVMQV 159
+ L YFNF GRAE +R+AL +GGI FEDKRL+ +EF KSS +PV++V
Sbjct: 7 IKLTYFNFGGRAELVRLALYIGGIPFEDKRLSREEFGALKSSFPLGQVPVLEV 59
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A5D6YDH3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDH3_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.580e-8 Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 19 LYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSE----FKHLPVMQV 159
L YF F GRAEAIR+AL +GGI FED+RL++ EF S + F LPV++V
Sbjct: 216 LAYFAFGGRAEAIRLALAIGGIPFEDERLSMNEFASRKASLPFNQLPVLEV 266
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: D0MZP7_PHYIT (Glutathione S-transferase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZP7_PHYIT) HSP 1 Score: 55.5 bits (132), Expect = 2.190e-7 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 13 VTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEF---KSS-EFKHLPVMQV 159
+ L YFNF GRAE++R+AL +GG+ FEDKRLT +EF KSS +PV++V
Sbjct: 7 IRLTYFNFGGRAESVRLALYVGGVPFEDKRLTREEFGALKSSFPLGQVPVLEV 59
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A2P4XQ43_9STRA (Glutathione S-transferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQ43_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 2.220e-7 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 19 LYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSE----FKHLPVMQVS--PLSHVVCV 186
L YF PGRAE IR+A +GGIEFED+RL+ +E++ + F LP+++V+ P+S + +
Sbjct: 96 LTYFPIPGRAEPIRLAFFIGGIEFEDERLSFEEYEKVKSELPFNQLPILEVNGEPISQSLAI 157
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A383VAT6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAT6_TETOB) HSP 1 Score: 54.7 bits (130), Expect = 2.830e-7 Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 10 PVTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFK----SSEFKHLPVMQV 159
P TLYYF+ PGRAEA R+ L LG +EF DKR + E+ S F+ +PV+Q+
Sbjct: 2 PPTLYYFDIPGRAEAARLLLTLGRVEFVDKRFSFAEWPAIKPSMPFQQVPVLQL 55
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A2P4WXS9_9STRA (Glutathione S-transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXS9_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 3.000e-7 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 19 LYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSE----FKHLPVMQVS--PLSHVVCV 186
L YF PGRAE IR+A +GGIEFED+RL+ +E++ + F LP+++V+ P+S + +
Sbjct: 216 LTYFPIPGRAEPIRLAFFIGGIEFEDERLSFEEYEKVKSELPFNQLPILEVNGEPVSQSLAI 277
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A8J5XPN6_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPN6_DIALT) HSP 1 Score: 54.7 bits (130), Expect = 3.540e-7 Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 13 VTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSEFKHLPVMQVSPL 168
V L YF +PGRAEAIR+AL +GG++FED+RL+++++K + P Q+ L
Sbjct: 55 VKLTYFLYPGRAEAIRVALAIGGVKFEDERLSVEDWKKHDKSCTPYGQLPVL 106
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A6A3LTM9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LTM9_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.050e-6 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 19 LYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEF----KSSEFKHLPVMQV 159
L YF FPGRAE IR+AL +GGI+FED+R++ E S F LPV+ V
Sbjct: 190 LVYFPFPGRAEPIRLALFIGGIQFEDERVSADELDRRRSSLPFNQLPVLYV 240
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Match: A0A0W8CR81_PHYNI (Glutathione S-transferase 1 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CR81_PHYNI) HSP 1 Score: 53.5 bits (127), Expect = 1.050e-6 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 13 VTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEF---KSS-EFKHLPVMQV 159
+ L YFNF GRAE +R+AL +GGI FEDKRL+ +EF KSS +PV++V
Sbjct: 7 IKLTYFNFGGRAEHVRLALYIGGIPFEDKRLSREEFGALKSSFPLGQVPVLEV 59 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130071.2194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig130071.2194.1 >prot_H-elongata_contig130071.2194.1 ID=prot_H-elongata_contig130071.2194.1|Name=mRNA_H-elongata_contig130071.2194.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp MAAPVTLYYFNFPGRAEAIRIALLLGGIEFEDKRLTLQEFKSSEFKHLPVback to top mRNA from alignment at H-elongata_contig130071:1565..1753- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig130071.2194.1 ID=mRNA_H-elongata_contig130071.2194.1|Name=mRNA_H-elongata_contig130071.2194.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=189bp|location=Sequence derived from alignment at H-elongata_contig130071:1565..1753- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig130071:1565..1753- >mRNA_H-elongata_contig130071.2194.1 ID=mRNA_H-elongata_contig130071.2194.1|Name=mRNA_H-elongata_contig130071.2194.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=378bp|location=Sequence derived from alignment at H-elongata_contig130071:1565..1753- (Himanthalia elongata Himel1 dioecious)back to top |