mRNA_H-elongata_contig13000.2190.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: D7FKF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF5_ECTSI) HSP 1 Score: 1101 bits (2848), Expect = 0.000e+0 Identity = 593/827 (71.70%), Postives = 663/827 (80.17%), Query Frame = 1
Query: 241 RWGSKHHQRRYQGGVLEGKKEEHRDESYGETEPLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSD-------VRGETKS--DGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQ--ADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRLCGRA-ARIKKEGDDPRMNSGATLNRAHVEAEDTLREASKMGSKAAAIEAARARFLARK 2685
RWG+ H +R+ E K ++ +E EPLPV +F+DELMKAVR SQVLVCTGETGSGKTTQIPQYLL LVRER+++ V +T + DG + KL+VAVTQPRRVAATSVA+RVA+ERGCR+GEEVGYSIRFEDRTG RTRIKYMTDGVLVRECLEDP LSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDL AVITSATLD+ERF FF+GCP ++VPGRTHAVDVYHSKTRQVMTATGPASP YVEDAVDII KVHR+QGPGHVLAFFTGQDEIERA RLL EAVAQ+K + A+G + NG+S ++VVPL+GALSAEAQ +AFK A+ RKVVMATNIAETSVTVPGVR+V+DPGYVKQKTYDP+RRMESLVVVPISQ+AAQQRAGRAGRTA GQCYRLYT++CY MLGET+PEILRTNLANT+LYLKVLGVDD+LAFD LDPPAEDQ+LEALQHLYCLGA+DQDG+AT+TGRRMSRFPL+PSLSRTLL AG+LGC+EEVLTIVALLSVES+WFTRS+G AE SHALFRHPLGDHFTYLAVYRAWEASG SDAWAK+ FLRVRALRTARSVR QL+GE RKASG R ++ E G E++SC RDLDKVRK+VCAGYF G+RCSKEWVYRSL VGALQ DDG+ RSG+TLMYLHPT +L++A +PPEHVVYTELVFTARPFMRHAMAVKGRW++S LE+V CS+DRLCGRA A EAS + K AIEAARARFLARK
Sbjct: 94 RWGN-HERRQQDAPESEDKGDKIAEEEEDAAEPLPVTLFKDELMKAVRGSQVLVCTGETGSGKTTQIPQYLLELVRERDADTTASGGXXXXXXXGVALDTPAPGDGKRPSHNNKKLLVAVTQPRRVAATSVAKRVADERGCRLGEEVGYSIRFEDRTGPRTRIKYMTDGVLVRECLEDPYLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLRAVITSATLDVERFAAFFDGCPFINVPGRTHAVDVYHSKTRQVMTATGPASPRYVEDAVDIIRKVHRTQGPGHVLAFFTGQDEIERASRLLSEAVAQEKIDRRAMGIEEEADNGVSEMIVVPLFGALSAEAQADAFKSARAGVRKVVMATNIAETSVTVPGVRFVVDPGYVKQKTYDPARRMESLVVVPISQVAAQQRAGRAGRTAPGQCYRLYTRNCYGGMLGETVPEILRTNLANTVLYLKVLGVDDILAFDFLDPPAEDQSLEALQHLYCLGALDQDGRATDTGRRMSRFPLEPSLSRTLLEAGELGCLEEVLTIVALLSVESIWFTRSKG---GGXXXXXXXXXXXXXXXXXXXXAEASHALFRHPLGDHFTYLAVYRAWEASGFSDAWAKEEFLRVRALRTARSVRSQLLGEVRKASGGGRRRGRQ--EGGLEVTSCGRDLDKVRKAVCAGYFTKAGQRCSKEWVYRSLAVGALQQEGDDGAG-RSGLTLMYLHPTSSLVHAQEPPEHVVYTELVFTARPFMRHAMAVKGRWLRSRLEAVRPCSSDRLCGRALAAAPGAXXXXXXXXXXXXXXXXXXXAGRTAEASSLAKKNDAIEAARARFLARK 913
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: W7TQ49_9STRA (Atp-dependent rna helicase dhx8 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ49_9STRA) HSP 1 Score: 691 bits (1784), Expect = 5.100e-235 Identity = 390/797 (48.93%), Postives = 506/797 (63.49%), Query Frame = 1
Query: 307 HRDESYGETEPLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKE--WVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLY--APDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRLCGRAARIKKEGDDPRMNSGATLNRAHVEAEDTLREASKMGSKAAAIEAARARFLARK 2685
H D + E LPV ++ ELM+AV ++V+VC GETGSGKTTQ PQYL R E G +V VTQPRRVAA SVA RVAEER ++GEEVGY IRFED TG +TRIK++TDG LVRECL DP L +Y +MLDEAHERS++TD+LFGL+KRAL+ R DL V+TSATLD++ F ++F+ CP +P RTH V VYHSKT+ +MT TGP+S YV+ VD+++K+HR+Q GH+LAF TGQDEI++AC LL A G QG +L+V+PLYG+LS E Q AF P RK ++ATNIAETSVTVPGVRYV+D G+VKQKTY+P+RRMESLVVVPIS++AA+QRAGRAGRT GQCYRLY+++C + M+ ET+PEI R NLAN LLYLKVLGV DV+ FD + P++DQ EAL L+ LGA+D GQ T G+ M+R PLDP+LSR +L A + GC+ EVLTI A+LSVE++WF+R D R ERD+EAE++HA F HP GDH TYL V+ AWEA + WAKD FL +RAL+ AR++R QL E R+A+G S ++D++ + +++ AG+F N G RC E VY+ + +G + L+Y+HP+ AL A P V+Y ELV+T+RPFMRH + V+ W+ + S +L + KE D + AT ++ + K + A+ AARARFLARK
Sbjct: 106 HIDPEHQHEEILPVYHYKAELMQAVCENRVVVCKGETGSGKTTQFPQYL------------------RDEFDPPG----------LVGVTQPRRVAAVSVATRVAEERHVKLGEEVGYQIRFEDCTGPQTRIKFVTDGCLVRECLADPLLIKYSFIMLDEAHERSVNTDLLFGLVKRALSMRLDLKLVVTSATLDVKAFAEYFDKCPVKEIPVRTHPVSVYHSKTKVIMTRTGPSSSAYVQSLVDVVIKIHRTQDEGHILAFLTGQDEIDKACSLLTAQAAD---------LGASQGEAGMDLLVLPLYGSLSGEQQLRAFHPVGPGTRKCIVATNIAETSVTVPGVRYVVDSGFVKQKTYNPARRMESLVVVPISRVAAEQRAGRAGRTGPGQCYRLYSRECLEGMMPETVPEICRCNLANVLLYLKVLGVPDVVDFDYFEAPSKDQLAEALLMLHSLGALDDSGQVTPLGQSMARLPLDPALSRAILQAVEEGCLREVLTIAAMLSVENIWFSRKPKPARDKLD----------RPPERDKEAERAHARFMHPRGDHVTYLMVFAAWEARAFDEQWAKDAFLSLRALKNARNIRQQLEQEVRRATGLT-------------AFSSAKDMEAICRALTAGFFNNAGTRCGAEATTVYKHM--------EGYMSNEDLKLIYVHPSSALAMNNARKSPLCVIYHELVYTSRPFMRHVLGVERSWLVECRARSGKASLSQLSLGGLQETKERDSRTSTADATEG-----SKAGIATPRKEKTDQGAVAAARARFLARK 829
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A835YMR5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR5_9STRA) HSP 1 Score: 650 bits (1677), Expect = 8.120e-219 Identity = 376/765 (49.15%), Postives = 465/765 (60.78%), Query Frame = 1
Query: 337 PLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQ------VMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVV--------------------------PISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRK----ASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRLCGR 2523
PLPVA+F+ ELM + ++QV+VCTGETGSGKTTQIPQYL ++ G+ + G ++ VTQPRRVAA SVA+RVAEERG R+G EVGYSIRFEDRT + T IKYMTDG+L+RE + DP LSRY +MLDEAHERSI TD+LFGLLK+ALA+RP+L AVI+SATLD+ RF +FN CP ++VPGR VD+YHSKT+Q +MT +GPAS YVED+V LK+H +QGPGHVL F TGQ+EIE A R L A N + G M + VVPLYGAL+A+AQ EAF P G RKV++ATNIAETSVTVPGVR+V+D GYVKQK YD RRMESLVVV PISQ AA QRAGRAGRT GQCYRLY++DC L FD LDPP EDQ +EALQ L+CLGAID DG MSRFPL+P LSR L+A+ L C +E+LT+VA+LSVE++W+ R R + GE DE AE +HA R P GD TYL V+R WE +GCSD WA+ NF+R+RALR ARSVR QL E ++ SG +S +D++R+++CAG+FMN ++ S+ VY +L + L+ L++LHP+C + AP HV + +LV TARP MRH AV W+ V + DRLCGR
Sbjct: 119 PLPVALFRGELMSIIAANQVIVCTGETGSGKTTQIPQYL--------------REELIGDDRGGGAG--------LIGVTQPRRVAAMSVAKRVAEERGVRLGGEVGYSIRFEDRTSAATVIKYMTDGMLIREVMADPLLSRYAAIMLDEAHERSIHTDVLFGLLKQALAKRPELKAVISSATLDVSRFAAYFNNCPVVTVPGRAFPVDIYHSKTKQASAGHRIMTVSGPASYRYVEDSVKTALKIHTTQGPGHVLLFLTGQEEIEEATRQLSAAPELSADANGSKDGSAQLGVKMK-MRVVPLYGALTADAQSEAFAPVPGNVRKVIVATNIAETSVTVPGVRFVVDAGYVKQKVYDLQRRMESLVVVXXXXXXXXXXXXXXXXXXXXXXXXXVPISQAAAAQRAGRAGRTHAGQCYRLYSRDC--------------------------------LTFDYLDPPDEDQLVEALQLLHCLGAIDADGA-------MSRFPLEPCLSRALVASTLLNCTDEMLTVVAMLSVETIWYKRPRSTQ----------------RGEADEAAEAAHARLRQPHGDCPTYLHVFRQWERAGCSDEWARSNFVRIRALRMARSVRSQLQAEVQRLGNAGSGXXXXXXXXXXXXXXGMSH-GNAVDRMRQALCAGFFMNAAQQASRHGVYSALSMPGLEVPK---------LLHLHPSCGDISAPH--THVAFVDLVSTARPTMRHVTAVDSTWLNDCRTGVAATTVDRLCGR 793
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A1V9ZQZ5_9STRA (Pre-mRNA-splicing factor ATP-dependent RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZQZ5_9STRA) HSP 1 Score: 605 bits (1559), Expect = 3.560e-202 Identity = 339/717 (47.28%), Postives = 456/717 (63.60%), Query Frame = 1
Query: 340 LPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCR--VGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGC--SDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSR--DLDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVK 2472
LPV ++ +L+ A+ ++Q++VC GETGSGKTTQ+PQ+LL GE+K + +TQPRRVA T+VA+RV EE Y+IRF+D+ + T+IK+MTDG+LVRECL DP L++Y ++MLDEAHERSI TDILFGLLK L +RPDL ++TSATLD ERF FFNGCP VPGR+ VD+YHSKT Q+M GP S Y+ AVD +L++H ++ GH+L F TGQ EI+ AC++L V + + ++PAV S L+V+PLYGALS+ Q F+P RDRKV++ TNIAETS+TV GV+YV+D G+ KQK Y+P R +ESLVVVPISQ++AQQRAGRAGRT+ G+CYRLY+K Y+ ML ET+PEI R+NLANT+LYLKVLG+ DV+ FD LDPPAED ++AL+ LY LGA+D+ G T TG+ M++FPL+P L+R LL L C E + +VA+LSVE+V+ ++ R GD R R E AL +HP GDH + L ++RAW+A +AW + L RA RTA SVR QL K + RG ++++++VCAGYFM+ R+C V+R L +GA ADD + + L+++HP+ +L PEH +Y ELV T+R FMRH + V G W++
Sbjct: 49 LPVGQYKAQLLDAIAANQIIVCIGETGSGKTTQLPQFLLEAGY--------------GESKR-------------IGITQPRRVATTAVAKRVGEELAASGTSPSTASYTIRFDDQCTAATKIKFMTDGILVRECLLDPLLTQYSIIMLDEAHERSIHTDILFGLLKSILVKRPDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKTHQIMGKAGPVST-YIAAAVDAVLQIHAAEPDGHILLFLTGQKEIDDACQMLTTRVQRLRDDDPAV----------SRLLVLPLYGALSSAKQRRIFEPT--RDRKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPERGLESLVVVPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYETMLPETVPEIQRSNLANTILYLKVLGIHDVVGFDYLDPPAEDAIVDALRQLYILGALDERGVVTATGKDMAQFPLEPRLARVLLEGIRLDCAREAMIVVAMLSVENVFMFQTDRRTGDDP-----------RAASRRRATELLDAL-QHPKGDHISLLQLFRAWDALPPHEQEAWCHERQLHSRAFRTAASVRSQLEELVAKVA------------RGAATQPAPALPVTERIQRAVCAGYFMHGARKCLMHSVFRCLHLGA--ADDSTAE-----LVHIHPSSSLAER-TAPEHCIYHELVHTSRSFMRHVLEVDGSWLE 693
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A067D8G3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8G3_SAPPC) HSP 1 Score: 595 bits (1534), Expect = 1.940e-198 Identity = 336/715 (46.99%), Postives = 447/715 (62.52%), Query Frame = 1
Query: 340 LPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCR--VGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVW-FTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGC--SDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWV 2469
LPV +++ L+ A+ ++Q++VC GETGSGKTTQ+PQ+LL G TK +A+TQPRRVA T+VA+RV EE + VGY+IRF+D+ S T+IK+MTDG+LVRECL+DP L +Y ++MLDEAHERSI TDILFGLLK L+ R DL ++TSATLD ERF FFNGCP VPGR+ VD+YHSK Q+M TGP S Y+ AVD L++H ++ GH+L F TGQ EI+ AC+ L + + + +P V + V+PLYGALS+ Q F+P+ RDRK+++ TNIAETS+TV GV+YV+D G+ KQK Y+P+R +ESLVVVP+SQ++AQQRAGRAGRT+ G+CYRLY+K Y++ML ET+PEI R+NLANT+LYLKVLG+ DV+ FD LDPPAED L+AL LY LGA+D DG TE G+ M++FPL+P L+R LL L C E +TIVA+LSVE+V+ F +R R+ ASR A HP GDH T L +++AWE +AW + L RA RTA SVR QL K R+ + LD+VR++V AG+FM+ R+C +YR L GST+ + L+++HP+ +L PPE +Y ELV T+R +MRH + V W+
Sbjct: 54 LPVGKYKEALLDAIAANQIIVCIGETGSGKTTQLPQFLLEAGY--------------GATKR-------------IAITQPRRVATTAVAKRVGEELAASGLSPKAVGYTIRFDDQCTSETKIKFMTDGILVRECLQDPLLQQYSIIMLDEAHERSIHTDILFGLLKSILSARSDLKLIVTSATLDDERFAAFFNGCPVFRVPGRSFPVDIYHSKQHQIMGKTGPVST-YITAAVDATLQIHSNEPAGHILLFLTGQKEIDDACKELTKRLQLLRDASPDV----------ARFHVLPLYGALSSAKQRRIFEPS--RDRKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGLESLVVVPVSQVSAQQRAGRAGRTSAGKCYRLYSKQSYESMLPETVPEIQRSNLANTILYLKVLGIADVVGFDYLDPPAEDAILDALHQLYILGALDDDGSVTEIGKDMAQFPLEPRLARVLLEGIQLDCANEAMTIVAMLSVENVFMFQTNRHRDDPMAASR--------------RRAMDLLETTIHPRGDHLTLLQLFQAWEHLPPYEQEAWCHERHLHCRAFRTAASVRSQLHDLVDKVRRRQXX-----------XXXXTPTLDRVRQAVTAGFFMHGARKCIMHAIYRCL-------HHGSTEDTTAELVHIHPSSSLSER-APPEFCIYHELVHTSRGYMRHVLEVDAAWL 695
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A8K1FAT5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAT5_PYTOL) HSP 1 Score: 593 bits (1530), Expect = 2.000e-197 Identity = 363/812 (44.70%), Postives = 485/812 (59.73%), Query Frame = 1
Query: 313 DESYGETEPLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCR-VGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGR-DRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFR-------HPLGDHFTYLAVYRAWE--ASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKEW-VYRSLGVGALQADD------GSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRL---CGRAARIKKEGDDPRMNSGATLNRAHVEAEDTLREASKMGSKAAAIEAARARFLARK 2685
DE + LP A + EL+ A+R+ QV++C GETGSGKTTQ+PQYLL + D+ + S V +TQPRRVA SVA+RVAEE +G VGYSIRF+DRT + TR+K++TDGVLVRECL DP LS+Y VVMLDEAHERS+ TDILFGLLK+ LA RPDL ++TSATLD +RF FFN P +++PGR+ VD++H+K Q+M GP S Y+ AV+ L+VH S+ GHVL F TGQ EIE AC+ L D+ P +GM + VVPLYGALS Q E F P R RKV++ATNIAETS+T+ GVR+V+D G+ KQK Y+P +ME+LVVVP+S+++AQQRAGRAGRTA G+C+RLY K+ Y ML E+IPEI RTNLANT+LYLKVLG+ DVL F LDPP ED L+ALQ LY L A+D G T GR M+ FPL+P L+R L+ A L C +E+ IVA+LSVE+++ + +E E+D E + + GD TYL V A+E ++ W +D L+ RAL TA S++ QL+ RK + E + + E SR ++R+++CAG+F + RRC+ + VYRS + + D+ G ++ V L++ HP L Y PP +Y ELV T+RPFMRHA+ V+ WV+ + + + +L GR A ++ P+M A A + E+ + +K A+ AARARFLARK
Sbjct: 48 DEKPAKAVELPAAAHRHELLAALRAHQVVICVGETGSGKTTQLPQYLL------------DAEDLVSSSHS-------------VVITQPRRVATVSVAQRVAEELAAGPLGGRVGYSIRFDDRTSTATRLKFVTDGVLVRECLRDPLLSQYAVVMLDEAHERSLHTDILFGLLKQVLATRPDLRLLVTSATLDTKRFAAFFNKAPIVTIPGRSFPVDIFHAKQMQIMGTRGPISS-YLRSAVETTLQVHNSEDAGHVLVFLTGQQEIEDACKQLRRL--SDETTRP---------DGMK-MRVVPLYGALSGRLQREIFAPVDARRTRKVIVATNIAETSLTIDGVRFVVDAGFTKQKVYNPQTQMEALVVVPVSKVSAQQRAGRAGRTAPGKCFRLYAKESYAQMLDESIPEIQRTNLANTVLYLKVLGIQDVLGFAFLDPPEEDAMLDALQQLYELQALDDKGVVTPLGRLMAEFPLEPKLARALMEAVVLECADEMARIVAMLSVENMYVSAKAKKENKDE--------------EQDGETARDDVMLTLTKEGLVDDRGDQLTYLRVLTAFERVSAEAQRRWCEDRDLQYRALSTASSIKQQLLDILRKLPADQVDELRSKSATDDEARRSSRST-RLRRALCAGFFTHAARRCAVQTSVYRSW---SFENDEEGGDGRGKSQTKNVQLLHFHPLSTLNYV-SPPLCCIYQELVATSRPFMRHAVQVETSWVRQYSQGRAQVTVQQLYALSGREAPVENVVHLPKMEEKAN-------APPPVDESQQQKAKEDAVAAARARFLARK 795
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: H3H3M8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3M8_PHYRM) HSP 1 Score: 587 bits (1512), Expect = 3.360e-194 Identity = 370/823 (44.96%), Postives = 478/823 (58.08%), Query Frame = 1
Query: 331 TEPLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVGEE--VGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNG-----------------CPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAK-GRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQD-GQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGCS--------DAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDL---DKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRL---CGRAARIKKEGDDPRM---NSGATLNRAHVEAEDTLREASKMGSKAAAIEAARARFLARK 2685
T PLP ++EL+ A++ QV+VC GETGSGKTTQIPQ+L A S K D ++ C VA+TQPRRVA SVA+RV EE RVG VGY+IRFE R +TR+K++TDGVLVRECL DP L +Y VVMLDEAHERSI TD+LFGLLK+ + RRP+ +ITSATLD +RF +FF CP + +PGR VD++HSK RQ+M GP S YV AV+ ++VH S+ PGH+L F TGQ EIE AC L + + D+ G L V+PLYGAL Q E F R RKV++ATNIAETS+T+ GVRYV+D G+ KQK Y+P+++MESLVVVPIS+++AQQRAGRAGRTA G+CYRLY K Y+ M ET+PEI RTNLANT+LYLK+LG+ DVL F LDPP ED L+AL+ LY LGA+D G+AT G+ M+ FPL+P LSR L+ + L C E+ +VA+LSVE+V+ + +G E+ A K L H GD TYL + +A+E+ C + W +D LR+RAL A S+ QL S RR E K R + R+ D++R+++CAG+FMN RRC+ E VYR L D KR+ L+ HP + Y+ PPE VY ELV T++PFMR A+AV+ RW+ E ST +L CGR +++ + +S AT EA + A + AARARFLARK
Sbjct: 59 TPPLPALEHREELLAALKDHQVVVCVGETGSGKTTQIPQFLHA-------------SGAYTSAKRDSG-DLAQC----VAITQPRRVATVSVAQRVGEETNSRVGGNGIVGYAIRFESRCSDQTRLKFLTDGVLVRECLNDPLLKKYSVVMLDEAHERSIHTDLLFGLLKQVMERRPEFRVLITSATLDADRFAEFFGQRTEEKHKKKKRIERVKPCPVVKIPGRVFPVDIFHSKQRQIMGHRGPLST-YVRAAVETTMQVHNSEEPGHILVFLTGQREIEDACAQLRALYREQQ----------DERRGEMELRVLPLYGALQGRRQREIFDAVPVDRVRKVIVATNIAETSLTIDGVRYVVDCGFTKQKVYNPAQQMESLVVVPISKVSAQQRAGRAGRTAPGKCYRLYNKVSYEEMAQETVPEIQRTNLANTVLYLKLLGIQDVLGFPYLDPPDEDSLLDALKQLYVLGALDASTGEATPLGKLMAAFPLEPKLSRALVESLLLDCSREMTQVVAMLSVENVFVETHHRNQKRRHRDESDGEDDKGPEWEQRMLALKEDRLL-HEDGDQLTYLLLLKAFESVSCKAQGHRRDLEKWCEDRHLRLRALTMAGSIVKQLRDIIDSLS-RRDIEAVKETVRSSDTRDSRREASLDDRLRQALCAGFFMNAARRCTLETVYR------LMHHDDDGKRAA-QLVQFHPLSVMCYS-SPPEFCVYQELVVTSKPFMRGALAVERRWLDYYSEDKLNVSTAQLYALCGRQPPVREHNSQQEVKQHDSDAT------EASSPTTASKPAPVTADVVAAARARFLARK 836
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: W2Q3R8_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q3R8_PHYPN) HSP 1 Score: 584 bits (1506), Expect = 9.530e-194 Identity = 371/827 (44.86%), Postives = 482/827 (58.28%), Query Frame = 1
Query: 307 HRDESYGETEPLPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVGEE--VGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNG-----------CPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAK-GRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHAL------FRHPLGDHFTYLAVYRAWEASG-------CSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDL---DKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVKSLLESVPECSTDRL---CGRAARIKKEGDDPRMNSGATLNRAHVEAEDTLREASKMGSKAA-AIEAARARFLARK 2685
HR+ + PLP ++EL++A++ QV+VC GETGSGKTTQ+PQ+L A +K DG+ I C +A+TQPRRVA SVA+RVAEE RVG + VGYSIRFE R T++K++TDGVLVRECL DP L +Y VVMLDEAHERSI TD+LFGLLK+ L RRP +ITSATLD ERF +F CP + +PGR VD++HSK RQ+M GP S YV AV+ ++VH S+ PGH+L F TGQ EIE AC + A+ +D+ G+D L V+PLYGAL Q E F R RKV++ATNIAETS+T+ GVRYV+D G+ KQK Y+P ++MESLV+VPIS+++AQQRAGRAGRT G+CYRLY K Y+ M ET+PEI RTNLANT+LYLK+LG+ DV+ F LDPP ED L+AL+ LY LGA+ G+AT G+ M+ FPL+P LSR L+ + L C E+ IVA+LSVE+V+ R R+ H ER+ E + L H GD TY + RA+E+ + W +D +LR RAL A S+ QL S R KN R RDL D++R+++CAG+FMN RRC+ E VYR L DG + L+ HP A+ Y+ PPE VY ELV T++PFMR A+AV+ RW+ S +L CGR A ++ + + M++ L +ASK + A A+ AARARFL RK
Sbjct: 52 HRETESSVSVPLPALEHREELLQALKDHQVVVCVGETGSGKTTQLPQFLHAC-------------GAYTSSKRDGD-EISQC----IAITQPRRVATVSVAQRVAEEMNTRVGGDGPVGYSIRFESRCSDNTKLKFLTDGVLVRECLSDPLLKKYSVVMLDEAHERSIHTDLLFGLLKQVLDRRPGFRVLITSATLDAERFAKYFGKPSEKKSKKVKPCPIVKIPGRVFPVDIFHSKQRQIMGHRGPLST-YVRAAVETTMQVHNSEEPGHILVFLTGQREIEDACAQIR-ALYKDQEKRS---DGLD-------LRVLPLYGALQGSRQREIFDSVPIDRVRKVIIATNIAETSLTIDGVRYVVDCGFTKQKVYNPVQQMESLVIVPISKVSAQQRAGRAGRTVPGKCYRLYNKTSYEEMAQETVPEIQRTNLANTVLYLKLLGIQDVIGFPYLDPPDEDSLLDALKQLYVLGALSDTGEATALGKLMAAFPLEPKLSRALVESLLLDCSHEMTQIVAMLSVENVFIEIHRKRKD---------------HDERESEDWEQRMLALKEDGLLHEDGDQLTYRLLLRAFESKSRKIHDRRALERWCEDRYLRFRALTMAGSIVKQLRDIIDTLSRRDLDAVMKNNNR--------RDLSLDDRLRQALCAGFFMNAARRCTMETVYRLL------YSDGKAQ-----LVQFHPLSAMCYS-APPEFCVYQELVVTSKPFMRGALAVERRWLDYFGNDKLNVSNSQLYALCGRKAPVEAKVQEELMDTSQV----------NLVDASKPVTVTADAVAAARARFLERK 803
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A485LRU1_9STRA (Aste57867_24935 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRU1_9STRA) HSP 1 Score: 578 bits (1491), Expect = 1.770e-192 Identity = 350/810 (43.21%), Postives = 474/810 (58.52%), Query Frame = 1
Query: 340 LPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCR--VGEEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAV---AQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSR----------------TLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHAL-FRHPLGDHFTYLAVYRAWEASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRDLDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVK----SLLESVPECS--TDRLCGRAARIKKEGDDPRMNSGATLNRAHVEAEDTLREASKMGSKAAAIEAARARFLARK 2685
LPV F+D L+ + +Q++VC GETGSGKTTQ+PQ+LL ++ N I A+TQPRRVA +VA+RV EE + VGY+IRF+D T + T+IK+MTDG+LVRECL+DP LS Y ++MLDEAHERSI TDILFGLL+ L +R DL ++TSATLD ++F+ FF+ CP + VPGR+ VD+YHSK Q+M +GP S Y++ AVD +++H ++ GH+L F TGQ EIE AC LL + + AQD++ P + ++PLYGALS+E Q F P RKV++ TNIAETS+TV GV+YV+D G+ KQK Y+P+R MESLVV+PISQ++AQQRAGRAGRT+ G+CYRLY+K Y M ETIPEI R+NLANT+LYLKVLG+DDV+ F +DPP ED L+ALQ LY LGA+D G T TG+ M++FPL+P L+R LL A L C E+ IVA+LSVE+V H E+DE S F P GDH T L +++AWEAS W D+ L +RA +TA +++ QL KAS R P S L +VR++VCAG+F + G++C + VYR L G K+ V L++ HP+ L + +PP+ +Y ELV+T+R FMRH + V W+K + + S+ EC T R +A+ K D ++ + ++D A+ AA+AR+LARK
Sbjct: 16 LPVGQFKDTLLDTINKNQIVVCIGETGSGKTTQLPQFLLEAGY------------------AENNKRI--------AITQPRRVATVAVAKRVGEELAASGISSKSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIIMLDEAHERSIHTDILFGLLQSILKQRRDLKLLVTSATLDADKFSAFFHNCPVVQVPGRSFPVDIYHSKQHQIMGKSGPVST-YIQAAVDTTMQIHMAEPEGHILVFLTGQKEIEEACALLRKRLDREAQDQSLQP--------------MHILPLYGALSSEKQRRIFNPTT-HGRKVIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPARGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKQSYNTMFPETIPEIQRSNLANTILYLKVLGIDDVVGFRYVDPPDEDAILDALQQLYVLGALDDVGDVTPTGKDMAQFPLEPRLARYDSFRDALVIHRELSSVLLEAIRLDCPREITRIVAMLSVENVILP----------------------HMEKDEGGRPSPLQEFLDPKGDHLTLLRLFQAWEASADRMRWCDDHGLHMRAFQTAANIQMQLQDLVDKASIARDPIAA--------TDSAPPRLHRVRQAVCAGFFQHGGQKCMMQPVYRVL------TPSGDDKQ--VQLVHFHPSSVFLES-NPPQVCIYHELVYTSRAFMRHVLEVDPAWLKLYQPAKMLSLAECYALTKRPVPASAQATKVADTADTDASKKMKTNEKTSDD-------------AVAAAKARYLARK 731
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Match: A0A024UBP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBP0_9STRA) HSP 1 Score: 577 bits (1486), Expect = 5.020e-191 Identity = 325/719 (45.20%), Postives = 438/719 (60.92%), Query Frame = 1
Query: 340 LPVAMFQDELMKAVRSSQVLVCTGETGSGKTTQIPQYLLALVRERESEPRTEHSDVRGETKSDGNTNIQHCGKLMVAVTQPRRVAATSVARRVAEERGCRVG--EEVGYSIRFEDRTGSRTRIKYMTDGVLVRECLEDPQLSRYGVVMLDEAHERSIDTDILFGLLKRALARRPDLHAVITSATLDIERFTDFFNGCPSLSVPGRTHAVDVYHSKTRQVMTATGPASPHYVEDAVDIILKVHRSQGPGHVLAFFTGQDEIERACRLLHEAVAQDKANNPAVGTGVDQGNGMSNLVVVPLYGALSAEAQGEAFKPAKGRDRKVVMATNIAETSVTVPGVRYVIDPGYVKQKTYDPSRRMESLVVVPISQIAAQQRAGRAGRTAHGQCYRLYTKDCYKAMLGETIPEILRTNLANTLLYLKVLGVDDVLAFDLLDPPAEDQALEALQHLYCLGAIDQDGQATETGRRMSRFPLDPSLSRTLLAAGDLGCVEEVLTIVALLSVESVWFTRSRGREGDSTASRGSSGGGRGRHGERDEEAEKSHALFRHPLGDHFTYLAVYRAWEASGCSDAWAKDNFLRVRALRTARSVRGQLVGEFRKASGRRRPEDQKNAERGQELSSCSRD------LDKVRKSVCAGYFMNTGRRCSKEWVYRSLGVGALQADDGSTKRSGVTLMYLHPTCALLYAPDPPEHVVYTELVFTARPFMRHAMAVKGRWVK 2472
LPV F+ +++ + S+Q++VC GETGSGKTTQIPQ+LL G KS +A+TQPRRVA +VA+RV EE + VGY+IRF+D T + T+IK+MTDG+LVRECL+DP LS Y +VMLDEAHERSI TDILFGLL L++R DL ++TSATLD ++F+ FF+ CP + +PGR+ VD+YHSK Q+M +GP S Y++ AVD +++H + GH+L F TGQ EIE AC LL + + Q A++ V + + +++PLYGAL+++ Q F P G+ RK+++ TNIAETS+TV GV+YV+D G+ KQK Y+P R MESLVV+PISQ++AQQRAGRAGRT+ G+CYRLY+K Y AM ETIPEI R+NLANT+LYLKVLG+DDV+ F LDPP ED L+ALQ LY LGA+D G T TG+ M++FPL+P L+R LL A L C +V IVA+LSVE+V E+D F HP GDH T L ++ AW+ W + + L RA +TA S++ QL KA D + G S D LD++R +VCAG+F + ++C + VYR L A+D + G L++ HP+ + PP +Y ELV+T+R FMRH + V W+K
Sbjct: 73 LPVGQFKQQILDTIESNQIVVCIGETGSGKTTQIPQFLLEA----------------GYAKS-----------KRIAITQPRRVATVAVAKRVGEELAASGHSIQSVGYTIRFDDHTSASTQIKFMTDGILVRECLQDPLLSAYSIVMLDEAHERSIHTDILFGLLHSILSKRRDLKLIVTSATLDADKFSQFFDNCPVVQIPGRSFPVDIYHSKQHQIMGKSGPVST-YIQSAVDTTMQIHEHEPEGHILVFLTGQKEIEEACALLRKRLDQ-LAHDGGVAA-------LPHTLILPLYGALTSDKQRRIFSPC-GKSRKIIVCTNIAETSLTVDGVKYVVDAGFTKQKVYNPVRGMESLVVLPISQVSAQQRAGRAGRTSAGKCYRLYSKKSYSAMFNETIPEIQRSNLANTILYLKVLGIDDVVGFGYLDPPQEDSILDALQQLYTLGALDDTGDVTATGKAMAQFPLEPRLARVLLEAIRLDCAADVTRIVAMLSVENVVLPYQ----------------------EKDGRPPLLQR-FHHPKGDHLTLLNLFHAWKKQSDRIGWCEIHGLHARAFQTASSIQQQLQDLVDKAI------DAPTNKHGAFQLPASTDIKSMEILDRIRLAVCAGFFQHGAQKCMMQPVYRVLA----PANDAT---QGTQLVHFHPSSVFVEM-SPPHTCIYHELVYTSRAFMRHVLDVDPAWLK 717 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13000.2190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13000.2190.1 >prot_H-elongata_contig13000.2190.1 ID=prot_H-elongata_contig13000.2190.1|Name=mRNA_H-elongata_contig13000.2190.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=894bp MSRSPKKSRHGHKNRPRDNEKGGNSEYRRRRSRSRSSSRSGSRSREHEKRback to top mRNA from alignment at H-elongata_contig13000:3952..7778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13000.2190.1 ID=mRNA_H-elongata_contig13000.2190.1|Name=mRNA_H-elongata_contig13000.2190.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3827bp|location=Sequence derived from alignment at H-elongata_contig13000:3952..7778- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13000:3952..7778- >mRNA_H-elongata_contig13000.2190.1 ID=mRNA_H-elongata_contig13000.2190.1|Name=mRNA_H-elongata_contig13000.2190.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5364bp|location=Sequence derived from alignment at H-elongata_contig13000:3952..7778- (Himanthalia elongata Himel1 dioecious)back to top |