mRNA_H-elongata_contig12987.2181.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: D7FPJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ3_ECTSI) HSP 1 Score: 328 bits (841), Expect = 4.630e-104 Identity = 164/178 (92.13%), Postives = 174/178 (97.75%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
QNKAVEFSKLQICVDLFLF + Y+DV TLVNLPKFTAGQLFYYPAFNAQ +GVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQ+L+ASV+S+QAALLYTTSCGERRIRVHN+AIPVETV+QNVFDSV+IDVLCNILAKQALEV
Sbjct: 480 QNKAVEFSKLQICVDLFLFSSGYSDVATLVNLPKFTAGQLFYYPAFNAQSDGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVVSVQAALLYTTSCGERRIRVHNLAIPVETVVQNVFDSVSIDVLCNILAKQALEV 657
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A836CAX8_9STRA (Sec23/Sec24 trunk domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX8_9STRA) HSP 1 Score: 288 bits (737), Expect = 3.990e-89 Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
QNKA +FSKLQICVDLFL GAQY DV TL LP T GQLFYYP FN QR+GVK AELTRVLTRATAFEAVMRVRATRGLR++NFYGNYFIRGTDLLALPNCTPDSVF VEF YDEQVL ASVISIQAALLYTTS GERRIRVHN+A+PV+TV Q +F+SV+ID LCN++AKQAL+V
Sbjct: 440 QNKAQDFSKLQICVDLFLCGAQYMDVATLFQLPSKTGGQLFYYPGFNVQRDGVKLQAELTRVLTRATAFEAVMRVRATRGLRMSNFYGNYFIRGTDLLALPNCTPDSVFGVEFAYDEQVLVASVISIQAALLYTTSTGERRIRVHNVALPVKTVCQEIFNSVSIDALCNLVAKQALDV 617
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A7S2V2R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2R8_9STRA) HSP 1 Score: 259 bits (662), Expect = 1.260e-82 Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEVIY 540
+ KA+EFS+ QICVDLFLF YTDV TL LPK+TAG+ ++YP F++QR+G KF ELTRVLT+ AFEAVMRVRATRGLRITNFYGNYF+RGTDLLALPNCTPD+ F +EF Y+EQ+L+A +ISIQAALLYT+S GERRIRVHN+AIPV V+Q V +SV IDV+ N+LAK ALEV +
Sbjct: 43 KTKAIEFSRYQICVDLFLFSEHYTDVATLSQLPKYTAGRCYHYPRFSSQRDGEKFVTELTRVLTQPIAFEAVMRVRATRGLRITNFYGNYFVRGTDLLALPNCTPDTCFGIEFAYEEQLLTAQIISIQAALLYTSSSGERRIRVHNLAIPVSQVIQEVVNSVAIDVVINVLAKSALEVAW 222
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A7S4D505_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D505_HETAK) HSP 1 Score: 251 bits (641), Expect = 2.030e-76 Identity = 120/178 (67.42%), Postives = 150/178 (84.27%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
+ KAVEFS+LQI V+LFLF AQY D+ L +LPK+TAG+ +YYPAF R+G + +AEL R LTR FEAVMRVRATRGLRITNFYGNYFIRG+DLLALPNC+P+ +A+E Y+EQ+++A VIS+QAALLYT+S GERRIRVHN+A+PV T++Q +S+NIDVLCNI+AKQAL+V
Sbjct: 289 KTKAVEFSRLQITVELFLFAAQYADLAALQDLPKYTAGRTYYYPAFRPPRDGARLDAELARCLTRPVVFEAVMRVRATRGLRITNFYGNYFIRGSDLLALPNCSPEHAYALELAYEEQLMTAQVISVQAALLYTSSNGERRIRVHNLAVPVTTIIQEYINSINIDVLCNIMAKQALDV 466
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A812VPB2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VPB2_SYMMI) HSP 1 Score: 228 bits (580), Expect = 1.470e-67 Identity = 112/177 (63.28%), Postives = 133/177 (75.14%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALE 531
+N A+EFS+LQICVD FLF QYTDV T L K+TAG +YYP F R+G KF AEL R LTRA+AFEAVMRVRATRGLRI NFYG++FIRGTDLLALPNCT DSV+ ++F YDE LS + +++QAALLYT S GERRIRVH M IPV + + +ID NI AKQA++
Sbjct: 364 KNTAIEFSRLQICVDTFLFSGQYTDVATFSTLSKYTAGSTYYYPGFYGPRDGEKFEAELHRTLTRASAFEAVMRVRATRGLRIQNFYGSFFIRGTDLLALPNCTSDSVYTMDFAYDEPALSTTAVTVQAALLYTNSAGERRIRVHTMVIPVTQHLSEMLSLTDIDCAVNIAAKQAVD 540
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: M4BN79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN79_HYAAE) HSP 1 Score: 210 bits (535), Expect = 4.020e-63 Identity = 100/178 (56.18%), Postives = 134/178 (75.28%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
+ A++F + Q+ VDLFLF + YTD+ ++ +L K++AGQ++YYPAFNA+R+G KF+ EL L R TA+EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C DS FAVE + + +L++S IS+QA LLYT S GERRIRVH + IPV + +F V+ D LCNI+AK ALEV
Sbjct: 10 RTNAIDFCRQQVSVDLFLFSSMYTDIASMGSLSKYSAGQVYYYPAFNAKRDGEKFSKELAHCLVRETAWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVEITHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKNALEV 187
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: F0YAP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAP0_AURAN) HSP 1 Score: 219 bits (559), Expect = 8.160e-63 Identity = 112/189 (59.26%), Postives = 140/189 (74.07%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV-IYVGVERERE 564
+ KAVEFS+LQICV+LF+ Y DV TL LPK TAGQL++YP F A +G K EL R LTR T FEAVMRVR TRGLR+ F GNY+IRG DLLALPNCTP+SVF +E +D+Q L+ASV SIQA+LLYTTS GERRIRVH M PV + + +S ++D LCN++AK+A++V + G+E R+
Sbjct: 1238 ETKAVEFSRLQICVELFVAAHTYADVATLGLLPKITAGQLYFYPGFKASHDGEKLATELARALTRPTGFEAVMRVRCTRGLRVAAFRGNYYIRGHDLLALPNCTPESVFDLEIAHDDQPLTASVASIQASLLYTTSSGERRIRVHTMVAPVSGDVGAIAESASVDALCNVVAKRAVDVALKQGLEASRQ 1426
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A662XXV8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXV8_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.320e-62 Identity = 98/177 (55.37%), Postives = 133/177 (75.14%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALE 531
+ A++F + Q+ VD+FLF + YTDV ++ +L K++AGQ++YYPAFNA+R+G KF+ EL L R T++EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C DS FAVE + + +L++S IS+QA LLYT S GERRIRVH + IPV + +F V+ D LCNI+AK ALE
Sbjct: 9 RTNAIDFCRQQVSVDMFLFSSMYTDVASIGSLSKYSAGQVYYYPAFNAERDGEKFSRELAHCLVRETSWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVELTHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKSALE 185
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: W7TF62_9STRA (Coatomer copii n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF62_9STRA) HSP 1 Score: 215 bits (548), Expect = 6.320e-62 Identity = 111/183 (60.66%), Postives = 138/183 (75.41%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLF---GAQ--YTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
+ KAVEFS++QI VDLF G Q + D+ +L L KFT G LFYYP F +++G K E+ R+LTR T FEAVMRVRATRGL++T FYGNY+IRGTDLLALPNC+ +SVF VE +DE L+ASVI +QAALL+TTS GERRIRVH +A PV V+Q V SV++D LCN++AK+ LEV
Sbjct: 392 RTKAVEFSRVQISVDLFCVAPAGQQTPFMDLASLTALSKFTGGNLFYYPGFAMEKDGRKLEEEMGRILTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHDEAFLTASVICVQAALLHTTSSGERRIRVHTVAAPVTAVLQEVIASVDVDTLCNLMAKRMLEV 574
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A024TUF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUF0_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.480e-61 Identity = 107/188 (56.91%), Postives = 139/188 (73.94%), Query Frame = 1
Query: 1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV-IYVGVERER 561
+ A+EF + Q+ VD FLF QYTD +L + K++AGQ+FYYP F A ++G KF AEL LTR T +EAVMRVR T+G+R+ NFYGN F+RG DLLALPNC D+ FA+E + + +L+ASVISIQAALLYTTSCGERRIRV +A+PV + VF SV++D +CN++AK ALEV + G+E R
Sbjct: 605 RKNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFYYPGFTAAKDGDKFRAELAHTLTRETGWEAVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQDALLTASVISIQAALLYTTSCGERRIRVLTVAVPVTKLFAEVFRSVDVDAICNMIAKNALEVALKTGLEPAR 792 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12987.2181.1 >prot_H-elongata_contig12987.2181.1 ID=prot_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQRback to top mRNA from alignment at H-elongata_contig12987:6658..8075+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12987.2181.1 ID=mRNA_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1418bp|location=Sequence derived from alignment at H-elongata_contig12987:6658..8075+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12987:6658..8075+ >mRNA_H-elongata_contig12987.2181.1 ID=mRNA_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1128bp|location=Sequence derived from alignment at H-elongata_contig12987:6658..8075+ (Himanthalia elongata Himel1 dioecious)back to top |