mRNA_H-elongata_contig12984.2177.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12984.2177.1
Unique NamemRNA_H-elongata_contig12984.2177.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: D7FNB2_ECTSI (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB2_ECTSI)

HSP 1 Score: 622 bits (1605), Expect = 2.570e-207
Identity = 334/479 (69.73%), Postives = 372/479 (77.66%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGD----VGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCAS-AMDSNNDKEVTHERG---------AGPTFAWVTLGSLGSRGRR------GEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            + VPPNSLANRQKE+FDD F PFFR+NQVFFVA      VG   DMI KHYLQRVMSVQRAIE A+  +  +G+    E LCF+PIDGEGCLVE PSQYWL DP++LA D +PSLTAACQT+D FL++RSPCMD+IGTPVMR VVFGDIGVNS+V+SPDPCGG+V  AGALVLTF+LNNY DPD+Q+LA+QWEKEV L V EEA+ +L NDVQAPMKVSYMA+RSV DSL VEAGENAWVL VSYLCMFLYV+L+LG PC AIRSRYSLALTG+ IVV+SLA TIGLLSLAGV TTLIVWEVVPFLTLAIGVDNMVILSREFDRLE+ PEFE CAS      + K   H  G          GPTF                    G+    T E+RLE+RMGAAV KVAPSIL        AFLVGALTDIPALRQFCLVAATAV VGF LQ++WFMAAL LDARRVSQ RLD+APW+
Sbjct:   48 IWVPPNSLANRQKEFFDDAFDPFFRINQVFFVAESAADTVGEGPDMIAKHYLQRVMSVQRAIENANFTTP-DGESKGFESLCFKPIDGEGCLVEGPSQYWLNDPIVLAGDVSPSLTAACQTSDPFLASRSPCMDQIGTPVMRGVVFGDIGVNSEVVSPDPCGGSVPKAGALVLTFVLNNYRDPDYQKLAEQWEKEVFLAVVEEARGMLANDVQAPMKVSYMAERSVSDSLSVEAGENAWVLVVSYLCMFLYVSLILGTPCHAIRSRYSLALTGITIVVASLATTIGLLSLAGVDTTLIVWEVVPFLTLAIGVDNMVILSREFDRLESTPEFEACASDGQHGQHLKGAGHPNGKXXXXXXDTTGPTFXXXXXXXXXXXXXXXXXXXXGDDNKTTAEARLEERMGAAVSKVAPSILGAAVCEAVAFLVGALTDIPALRQFCLVAATAVVVGFALQISWFMAALCLDARRVSQGRLDLAPWM 525          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A2D4BJI4_PYTIN (SSD domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJI4_PYTIN)

HSP 1 Score: 338 bits (867), Expect = 4.010e-103
Identity = 213/467 (45.61%), Postives = 274/467 (58.67%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDA------DMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPD-PDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGLLS-LAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPP S A ++++ F++ F PFFR+ Q+ F A     DA      D+I+K +L R+  V+ AI    +   VNG+  SLED C+RPI G+GCLV SP QYWLG+  LLA D +  LT ACQTT+  L  RSPCMD+ G PVMR VVFG +  +S   +PDPCG +   A AL++TFLL+N P+   +  L + WE++V L +A    A    D    M+++YMAQRSV DSLEV+   NA+V+ VSYL MFLYV++ LG   DA+ SRY L LTG+ IV+ +L   +G+ S L  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL  A                     RG+G T +      +                 L+Q +G  +  V PSIL        AFLVGALT IPAL  FC+VAA AV     LQ+TWF+AAL LDARRV   R D+ P L
Sbjct:   46 LWVPPTSAAAKEQQQFNELFGPFFRIEQLIFYADTPANDAANSQANDLIDKKFLLRMAEVETAIREQHV--PVNGRNVSLEDFCYRPIAGKGCLVTSPFQYWLGNATLLAQDPDIKLTTACQTTEPTLKERSPCMDQNGIPVMRNVVFGGLSSDSCHANPDPCGESTPRATALMVTFLLHNDPENATYTALVEAWEEQVFLRLA---AAFEPAD---GMRLAYMAQRSVADSLEVQTKHNAFVVVVSYLVMFLYVSMSLGTFNDAVTSRYGLGLTGILIVLLALGAAMGICSALLRMEVTMITLEVVPFLILAIGVDNMFILTNEFDRLLAA---------------------RGSGVTHSSEHFDDV-----------------LQQVLGETMVNVGPSILVAAVSETLAFLVGALTRIPALESFCVVAAIAVLADLGLQLTWFVAALALDARRVRARRFDLMPCL 466          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A024UE41_9STRA (SSD domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE41_9STRA)

HSP 1 Score: 333 bits (855), Expect = 2.090e-101
Identity = 208/460 (45.22%), Postives = 262/460 (56.96%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGLLSLA-GVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPP S + +Q+EYFD+NF PFFR+ Q+ F   +   D D+I    L  V ++Q  IE A  V +V+G+  +L+DLCFRPI G+GCLVESP QYW  +  LLA D +  LT  CQTT   LST SPCMD+ G PV+R+VVFG +  ++   +PDPCG A   A AL++TFLLNN  +  FQ LA+ WE +V L     + + L         V  MAQRSVED+L VE  +NA+V+ VSY  MFLYVAL LG   D +RSR+ L L G+ IV+ S+ I  G+   A  +  T+I  EVVPFL LAIGVDNM IL+ E DRL        C   +                           SRG             L Q +G A+  V PSI         AFLVGA T IPAL  FC+VAA AV   + LQ+TWF AAL LDARR+   R D+ PW+
Sbjct:   54 LWVPPKSTSAKQQEYFDENFGPFFRIEQLIFHFPNGSDDKDVITAPLLAEVAALQHHIENA--VVNVDGRNITLDDLCFRPIPGKGCLVESPMQYWRNNVSLLATDPDIKLTIVCQTTHPLLSTYSPCMDQNGLPVIRDVVFGGLATDTCHTNPDPCGDATPRASALIVTFLLNNPQNSTFQALAKAWEAQVFLNTRFSSPSGL--------VVERMAQRSVEDALTVETHQNAFVVVVSYGVMFLYVALALGKARDPVRSRFGLGLWGIVIVLFSMGIAFGIAVFALHLEITMITLEVVPFLILAIGVDNMFILTNELDRLTR------CQPHI---------------------------SRGFHS----------LPQLLGDAMMHVGPSITVAAISESLAFLVGAYTKIPALESFCIVAALAVVADYCLQMTWFAAALALDARRIRARRYDLCPWM 460          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A1V9ZMJ5_9STRA (Resistance-Nodulation-Cell Division (RND) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMJ5_9STRA)

HSP 1 Score: 333 bits (854), Expect = 3.030e-101
Identity = 201/460 (43.70%), Postives = 267/460 (58.04%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L V P S +  Q+ +FDD+F PFFR+ Q+ F   + G D D+I K +L  +  +Q  IE  +  + +     SL DLCF PI G+GCLVESP QYW  D  +L  D +  LT ACQTT   L + SPCMD+ G PVM++VVFG I  +S   +PDPCG    +A AL++TFLLNN  DP FQ  A+ WE++V L +++  K+      +  + V  MAQRS+ED+L VE  +NA+V+ +SY  MFLYVA+ LG P D +RSR+ L L G+ +VV+S+ I  G  +++  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL              + +   ++ E        + TL  L                     MG A+  V PSI         AFLVGALT IPAL  FC+VAA AV   +LLQ+TWF AAL +DARRV   R D+ PW+
Sbjct:   62 LWVAPTSKSATQQRFFDDHFGPFFRIEQLIFHLPN-GSDNDIITKDFLTEIGHLQHQIEMTN--ATLGNSSISLNDLCFHPISGKGCLVESPLQYWRNDIKILHTDPDIKLTIACQTTHPDLKSFSPCMDQNGIPVMKDVVFGGITADSCHKNPDPCGEPTPSATALIVTFLLNNDMDPVFQAKAKAWEEQVFLGLSQNYKS------KVGLTVKIMAQRSIEDALTVETKQNAFVVVLSYALMFLYVAIALGQPRDPVRSRFVLGLWGILVVVASMGIAFGTAVAILRIDITMITLEVVPFLILAIGVDNMFILTNEFDRL--------------TRSQTHISRE--------FTTLPQL---------------------MGDAMANVGPSITVAAISECLAFLVGALTRIPALESFCIVAAIAVLADYLLQITWFAAALAIDARRVRARRYDLFPWI 469          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A1V9ZFL5_9STRA (Resistance-Nodulation-Cell Division (RND) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFL5_9STRA)

HSP 1 Score: 328 bits (840), Expect = 3.790e-99
Identity = 205/458 (44.76%), Postives = 271/458 (59.17%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAP 1398
            L VPP S +  Q+ +FD++F PFFR+ Q+ F   + G D D+I K +L  V  VQ+ IE AS  + +  +  SL DLCFRPI G+GCLVESP QYW GD  LL  D +  LT ACQT    L++ +PCMD+ G PVMR+VVFG +  ++   +PDPCG     A AL++T+LL N  +  FQ  A+ WE++V L  A    +      +A + V  MAQRSVED+L VE  +N +++ +SYL MF+YVA+ LG+PCD +RSR+ L L+G+ IV+SS+ I  G+ + +  +  T+I  EVVPFL LAIGVDNM IL+ E DRL  +    P                RGA P      L S  +      VE  T    L   +G A+ +V PSI         AFLVGA T IPAL  FC+VAA AV   + LQ+TWF AAL LDA+RV   R D+ P
Sbjct:   62 LWVPPASTSAAQQRFFDEHFGPFFRIEQLIFHLPN-GSDNDVITKAFLAEVAEVQQHIETAS--ATLGNETISLGDLCFRPIPGKGCLVESPLQYWRGDASLLQTDPDIKLTIACQTMHPDLTSFAPCMDQNGIPVMRDVVFGGLAADTCHKNPDPCGDPTPRATALIVTYLLTNTANATFQERAKAWEEQVFLHYAAGFAS------KAGLVVEAMAQRSVEDALTVETKQNVFIVALSYLLMFVYVAMALGNPCDPVRSRFVLGLSGILIVMSSMGIAFGIAIVVLRIEITMITLEVVPFLILAIGVDNMFILTTELDRLLRSQTHIP----------------RGALPPV----LASPAA------VEFTT----LPLLLGDAMARVGPSITVAAVSECLAFLVGAYTKIPALESFCIVAALAVLADYALQMTWFAAALALDAKRVRARRYDLVP 480          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A662Y378_9STRA (SSD domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y378_9STRA)

HSP 1 Score: 328 bits (842), Expect = 4.420e-99
Identity = 207/502 (41.24%), Postives = 275/502 (54.78%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDA--------------DMIEKHYLQRVMSVQRAIERASI-VSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPD-FQRLAQQWEKEVLLTVAEE-AKAL-------------------------LENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPP S+A R++  FD+ F PFFR+ Q+ F   D    A              D+++K +L ++  +Q  I +  I   D      SL+D C+RPI G+GCLV SP QYWLG+  LL +D +  LTAACQT D  L  RSPCMD+ G PVMR+VVFG +  +    +PDPCG A   A AL++TFLL+N P+ + + R  +QWE+EV L ++E  A AL                         LE      M+++YMAQRSV DSLEV+  +NA+++ VSYL MFLYV+  LG   D +RSR+ L  TG+ +V+ SL   +G+  +L  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL         A+     N ++   +                             +  L+Q +G  +  V PSI+        AFLVGALT IPAL  FC+VAA AV   F LQ+TWF AAL LDARRV   R D+ PW+
Sbjct:    8 LWVPPGSVAAREQARFDELFGPFFRIQQMIFYVEDADDAAAVDLQSPETCDATHDLVQKRFLLQMAKIQNEISQTVIPAKDNTSVSLSLQDFCYRPIKGKGCLVTSPFQYWLGNVSLLENDPDIKLTAACQTIDPILKQRSPCMDQNGVPVMRDVVFGGLARDDCHQNPDPCGEATPQAKALMVTFLLHNNPENETYTRYVEQWEQEVFLKISERTANALKPSGGGGNGSMDSMDSNLDGAEDLELEAAAAEGMRLTYMAQRSVADSLEVQTKQNAFIVVVSYLVMFLYVSASLGKFTDPVRSRFGLGFTGILVVLLSLGAAMGVSCALLQMEVTMITLEVVPFLVLAIGVDNMFILTNEFDRLAA---LRGLATLETRRNTRDRAEDE----------------------------QLMLKQVLGETMVNVGPSIVVAAVAESLAFLVGALTRIPALTSFCVVAALAVVADFALQMTWFAAALVLDARRVRARRYDLFPWM 478          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: H3GZV5_PHYRM (SSD domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZV5_PHYRM)

HSP 1 Score: 328 bits (842), Expect = 6.630e-99
Identity = 206/499 (41.28%), Postives = 277/499 (55.51%), Query Frame = 1
Query:    1 MECRFVHRFLQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDA-------DMIEKHYLQRVMSVQRAIERASIVS-DVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPD-FQRLAQQWEKEVLLTVAEEAKALLE---------------NDVQAP------MKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            M+ +   + L VPP S+A +++  FD+ F PFFR+ Q+ F   +   ++       D++++ +L ++  +Q  I  A I S D       LED C+ PI G+GCLV SP QYWLG+  LL  D +  LT ACQTTD  L  RSPCMD+ G PVMR VVFG +  +    +PDPCG A   A AL++TFLLNN PD + + R  + WEKEV L +AE+A   L                 D Q        M+++YMA+RSV DSL V+  +NA+++ VSYL MFLYV+  LG   D +RSR+ L  TG+ IV+ SL   +G+  ++  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL            + + ++K  T +R                               L+Q +G  +  V PSI+        AFLVGALT IPAL  FC+VAA AVA  F LQ+TWF +AL LDARRV   R D+ PW+
Sbjct:   36 MQLQTDPQALWVPPYSVAKQEQTRFDELFGPFFRIQQLIFYVEEPNPESVTCDAAHDLVQRRFLLQMAKIQDQISNAVINSQDAANTTLGLEDFCYHPIHGKGCLVTSPLQYWLGNATLLQQDPDVKLTTACQTTDPVLKERSPCMDQNGVPVMRNVVFGGLSRDDCHENPDPCGEATPQAKALMVTFLLNNRPDNETYTRHVELWEKEVFLKIAEQAVESLSPSGDNGNDDFIWDAVEDQQLADVGVDGMRLTYMAERSVADSLVVQTKQNAFIVVVSYLVMFLYVSASLGKFSDPVRSRFGLGFTGILIVLLSLGAAMGVSCAILQMEVTMITLEVVPFLVLAIGVDNMFILTNEFDRLA-------ALRGLATVDNKRNTRDRAEDELLM------------------------LKQVLGETMVNVGPSIVVAAVAETLAFLVGALTRIPALTSFCVVAALAVAADFALQMTWFASALVLDARRVRARRYDLFPWM 503          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A067D4S9_SAPPC (SSD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4S9_SAPPC)

HSP 1 Score: 327 bits (837), Expect = 8.200e-99
Identity = 197/460 (42.83%), Postives = 266/460 (57.83%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPP S +  Q+ +FD++F PFFR+ Q+ F   + G D D+I K +L  V  +Q+ I   +  + +  +   L+DLCFRPI G+GCLVESP QYW GD  L+A D +  LT ACQTT   L++ SPCMD+ G PVMR+VVFG +  +S   +PDPCG     A AL++TFLL N  +P  Q  A+ WE++V L +A    +      +  + V  MAQRSVED+L VE   NA+++ +SYL MF+YVA+ LG P D ++SRY L L G++IV++S+ I  G+ +++  +  T+I  EVVPFL LAIGVDNM IL+ E DR+  A    P          +E T                                  L Q +G A+  V PSI         AFLVGA T IPAL  FC+VAA AV   ++LQ+TWF AAL +DARRV   R D+ PW+
Sbjct:   62 LWVPPTSTSAMQQRFFDEHFGPFFRIEQLIFHLPN-GSDNDVIYKAFLAEVGELQQHIMTTN--ATLGNETIGLDDLCFRPIPGKGCLVESPMQYWRGDVALVASDPDIKLTIACQTTHPNLTSFSPCMDQNGVPVMRDVVFGGLSTDSCHKNPDPCGDPTPRATALIVTFLLTNDMEPAAQARAKAWEEQVFLHLAATYVS------KVGLVVESMAQRSVEDALTVETQRNAFIVVLSYLLMFVYVAMALGKPLDPVKSRYVLGLWGISIVIASMGIAFGIAVTVLHMDITMITLEVVPFLILAIGVDNMFILTNELDRVLRAQTHIP----------REFTS---------------------------------LPQLLGDAMANVGPSITVAAVSESLAFLVGAYTKIPALESFCIVAALAVVADYVLQMTWFAAALAIDARRVRARRYDLMPWM 469          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: D0NHB7_PHYIT (Resistance-Nodulation-Cell Division (RND) Superfamily n=14 Tax=Phytophthora TaxID=4783 RepID=D0NHB7_PHYIT)

HSP 1 Score: 327 bits (839), Expect = 1.000e-98
Identity = 208/496 (41.94%), Postives = 275/496 (55.44%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQ-VFFVAGDVGGDAD-------------MIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPD-FQRLAQQWEKEVLLTVAEEAKALLE------------NDVQAP---------MKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPPNS+A R++  FD+ F PFFR+ Q +F+V GD   ++D             ++++ +L ++  VQ  I  A              D C+RPI G+GCL+ SP QYWL +  LL  D +  LT ACQTTD  L   SPCMD+ G PVMR VVFG +  +    +PDPCG A   A AL++TFLLNN P+ + F R A+ WEKEV L +AE+A   L+            + V+ P         M+++YMA+RSV DSL V+  +NA+++ VSYL MFLYV+  LG   D +RSR+ L LTG+ IV+ SL   +G+  +L  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL T          + + + K  T +R                               L+Q MG  +  V PSI+        AFLVGALT IPAL  FC+VAA AVA  F LQ+TW  +AL LDARRV   R D+ PW+
Sbjct:   45 LWVPPNSVAAREQTRFDELFGPFFRIQQLIFYVEGDTNPNSDSELVPATCDANHDLVQRQFLVQMAKVQTQITNA--------------DFCYRPIKGKGCLITSPFQYWLTNSTLLQHDPDIKLTTACQTTDPVLKDHSPCMDQNGVPVMRNVVFGGLSRDECHQNPDPCGEATPQAKALMVTFLLNNNPENETFTRYAKLWEKEVFLLIAEQAAESLKPSGGNTSGEFIWDSVEDPELADAGVDGMRLTYMAERSVADSLVVQTNQNAFIVVVSYLVMFLYVSASLGKFSDPVRSRFGLGLTGILIVLLSLGAAMGISCTLLQMEVTMITLEVVPFLVLAIGVDNMFILTNEFDRLATL-------RGLATLDTKRNTRDRAEDELLM------------------------LKQVMGETMANVGPSIVVAAMAESLAFLVGALTRIPALTSFCVVAALAVAANFALQMTWLASALVLDARRVRARRYDLFPWV 495          
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Match: A0A485KZV1_9STRA (Aste57867_13917 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZV1_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.480e-98
Identity = 198/460 (43.04%), Postives = 261/460 (56.74%), Query Frame = 1
Query:   28 LQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDADMIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVESPSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVVFGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKEVLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSYLCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGL-LSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKEVTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAPSILXXXXXXXXAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAALYLDARRVSQERLDVAPWL 1404
            L VPP S + +Q+ +FDD+F PFFR+ Q+ F   +   D D+I K +L  V  +Q+ I   + V  V+G+  +L+DLCFRPI G+GCLVESP QYW G+  ++  D +  LT  CQT    L++ SPC+D+ G PVMR+VVFG +  ++   +PDPCG     A ALV+TFLLNN  +  FQ +A+ WE +V L     +   L         V  MAQRSVED+L VE  +NA+V+ +SY  MFLYVA+ LG   D +RSR+ L L G+ IV+ S+ I  G+ +S+  +  T+I  EVVPFL LAIGVDNM IL+ EFDRL  +   +P  S   S                                         L Q MG A+  V PSI         AFLVGA T IPAL  FC VAA AV   ++LQ+TWF AAL LDARR+   R D+ PW+
Sbjct:   10 LWVPPTSTSAKQQAFFDDHFGPFFRIEQLIFHFPNGSDDNDLIAKPFLAEVAELQQRITSTAAV--VDGRTVTLDDLCFRPIPGKGCLVESPLQYWRGNASIMTSDPDIKLTIVCQTIHPSLTSFSPCLDQNGVPVMRDVVFGGLSTDTCHTNPDPCGEETPQATALVVTFLLNNPENATFQAMAKAWEDQVFLATTFNSTVGL--------TVERMAQRSVEDALAVETKQNAFVVVLSYGLMFLYVAVALGKVRDPVRSRFGLGLWGILIVLFSMGIAFGIAVSVLHIEITMITLEVVPFLILAIGVDNMFILTNEFDRLARS---QPYISRNFST----------------------------------------LPQIMGDAMVHVGPSITVAAISESLAFLVGAYTKIPALESFCTVAAIAVVADYVLQMTWFAAALALDARRMRARRYDLCPWI 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12984.2177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNB2_ECTSI2.570e-20769.73SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2D4BJI4_PYTIN4.010e-10345.61SSD domain-containing protein n=1 Tax=Pythium insi... [more]
A0A024UE41_9STRA2.090e-10145.22SSD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZMJ5_9STRA3.030e-10143.70Resistance-Nodulation-Cell Division (RND) Superfam... [more]
A0A1V9ZFL5_9STRA3.790e-9944.76Resistance-Nodulation-Cell Division (RND) Superfam... [more]
A0A662Y378_9STRA4.420e-9941.24SSD domain-containing protein (Fragment) n=2 Tax=N... [more]
H3GZV5_PHYRM6.630e-9941.28SSD domain-containing protein n=1 Tax=Phytophthora... [more]
A0A067D4S9_SAPPC8.200e-9942.83SSD domain-containing protein n=2 Tax=Saprolegnia ... [more]
D0NHB7_PHYIT1.000e-9841.94Resistance-Nodulation-Cell Division (RND) Superfam... [more]
A0A485KZV1_9STRA2.480e-9843.04Aste57867_13917 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12984contigH-elongata_contig12984:320..7013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score623.6
Seed ortholog evalue7.3e-176
Seed eggNOG ortholog2880.D7FNB2
KEGG koko:K12385
KEGG TC2.A.6.6
KEGG Pathwayko04142,ko04979,map04142,map04979
EggNOG free text desc.cellular response to sterol depletion
EggNOG OGsKOG1933@1,KOG1933@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons10
Model size1404
Cds size1404
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12984.2177.1prot_H-elongata_contig12984.2177.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12984 320..7013 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929771.4952464-CDS-H-elongata_contig12984:319..4301622929771.4952464-CDS-H-elongata_contig12984:319..430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 320..430 +
1691679151.4966662-CDS-H-elongata_contig12984:319..4301691679151.4966662-CDS-H-elongata_contig12984:319..430Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 320..430 +
1622929771.514953-CDS-H-elongata_contig12984:1407..17161622929771.514953-CDS-H-elongata_contig12984:1407..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 1408..1716 +
1691679151.512218-CDS-H-elongata_contig12984:1407..17161691679151.512218-CDS-H-elongata_contig12984:1407..1716Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 1408..1716 +
1622929771.5301013-CDS-H-elongata_contig12984:2188..23681622929771.5301013-CDS-H-elongata_contig12984:2188..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 2189..2368 +
1691679151.5213003-CDS-H-elongata_contig12984:2188..23681691679151.5213003-CDS-H-elongata_contig12984:2188..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 2189..2368 +
1622929771.5454617-CDS-H-elongata_contig12984:2852..29181622929771.5454617-CDS-H-elongata_contig12984:2852..2918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 2853..2918 +
1691679151.530501-CDS-H-elongata_contig12984:2852..29181691679151.530501-CDS-H-elongata_contig12984:2852..2918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 2853..2918 +
1622929771.562073-CDS-H-elongata_contig12984:3703..38431622929771.562073-CDS-H-elongata_contig12984:3703..3843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 3704..3843 +
1691679151.5403016-CDS-H-elongata_contig12984:3703..38431691679151.5403016-CDS-H-elongata_contig12984:3703..3843Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 3704..3843 +
1622929771.5827925-CDS-H-elongata_contig12984:4127..42391622929771.5827925-CDS-H-elongata_contig12984:4127..4239Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 4128..4239 +
1691679151.5492473-CDS-H-elongata_contig12984:4127..42391691679151.5492473-CDS-H-elongata_contig12984:4127..4239Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 4128..4239 +
1622929771.5998445-CDS-H-elongata_contig12984:4749..48171622929771.5998445-CDS-H-elongata_contig12984:4749..4817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 4750..4817 +
1691679151.5585248-CDS-H-elongata_contig12984:4749..48171691679151.5585248-CDS-H-elongata_contig12984:4749..4817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 4750..4817 +
1622929771.6130059-CDS-H-elongata_contig12984:5871..60761622929771.6130059-CDS-H-elongata_contig12984:5871..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 5872..6076 +
1691679151.573579-CDS-H-elongata_contig12984:5871..60761691679151.573579-CDS-H-elongata_contig12984:5871..6076Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 5872..6076 +
1622929771.6285546-CDS-H-elongata_contig12984:6400..65351622929771.6285546-CDS-H-elongata_contig12984:6400..6535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 6401..6535 +
1691679151.5830226-CDS-H-elongata_contig12984:6400..65351691679151.5830226-CDS-H-elongata_contig12984:6400..6535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 6401..6535 +
1622929771.6431644-CDS-H-elongata_contig12984:6935..70131622929771.6431644-CDS-H-elongata_contig12984:6935..7013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 6936..7013 +
1691679151.5919468-CDS-H-elongata_contig12984:6935..70131691679151.5919468-CDS-H-elongata_contig12984:6935..7013Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12984 6936..7013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12984.2177.1

>prot_H-elongata_contig12984.2177.1 ID=prot_H-elongata_contig12984.2177.1|Name=mRNA_H-elongata_contig12984.2177.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=468bp
MECRFVHRFLQVPPNSLANRQKEYFDDNFSPFFRVNQVFFVAGDVGGDAD
MIEKHYLQRVMSVQRAIERASIVSDVNGQPASLEDLCFRPIDGEGCLVES
PSQYWLGDPVLLADDGNPSLTAACQTTDAFLSTRSPCMDRIGTPVMREVV
FGDIGVNSQVISPDPCGGAVATAGALVLTFLLNNYPDPDFQRLAQQWEKE
VLLTVAEEAKALLENDVQAPMKVSYMAQRSVEDSLEVEAGENAWVLGVSY
LCMFLYVALVLGHPCDAIRSRYSLALTGVAIVVSSLAITIGLLSLAGVGT
TLIVWEVVPFLTLAIGVDNMVILSREFDRLETAPEFEPCASAMDSNNDKE
VTHERGAGPTFAWVTLGSLGSRGRRGEVEGKTRESRLEQRMGAAVCKVAP
SILGAAVCEAVAFLVGALTDIPALRQFCLVAATAVAVGFLLQVTWFMAAL
YLDARRVSQERLDVAPWL
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mRNA from alignment at H-elongata_contig12984:320..7013+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12984.2177.1 ID=mRNA_H-elongata_contig12984.2177.1|Name=mRNA_H-elongata_contig12984.2177.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6694bp|location=Sequence derived from alignment at H-elongata_contig12984:320..7013+ (Himanthalia elongata Himel1 dioecious)
ATGGAATGTCGCTTCGTCCACCGCTTCCTGCAGGTCCCCCCGAACAGCCT AGCGAACCGTCAAAAGGAATACTTCGATGATAACTTCTCGCCCTTCTTCC GTGTCAATCAGGTGAGAAGCCAAATTACAAGCTACAACTCCTGTATTAAT GTCTTACTGTATTCATGTATGACTGCATTATTGTAACACTGTGTTACTAT TAATAGATTAGTGTTTTACTAGATTACTGTATTAATGTATGACTGCATTA TTGTAACACTATTTTACTATTAATAGATTAGTGTTTTACTAGATTACTGT ATTGTTATATTAATGTAAGACTGTATTATTGTAGTACTGTGTTACTAGAT TACTGTATTCATGTAGTAATACTAAATTGCTGTATTACTGTATTACTACC TCCTCCGTTAGTGGTGTAGAGCTATCGAGGGGCTATCTAACCGAAAACAA AACAATAGTATAATTGTATCGAAATAGCTTTATTGGCCCTAGACTATATC CTAGACTATATCCTGCTGCTGTGGTGCAGTGCTCTTGTTATTGTACCAGG AATAATCGATCGAAATCCTCCTCCAAAGCTGTAGTGATCTGGATAATGGT CCATATATATTGGTGTTCAAAAACATGACCATATACTAGACTGTGCCTTA GAAAACTCGTATTCATTTGGGTTGGGGTTAGGGTTAGGGTTGGGGTTAGG GTTAGGGTTAGGGTTAGGGTTGTGAAATCATCCAGGTAAGGTTAAAGTAC TGGATTTAATGCATTGAATGCACTCTATTCATATAACAACCAATCAGTAC AGTATTGTACAAATAGTGGTCAGTTGTTTGATTTGTCGAGCTGACAGTGA AGGTTAAAGTGAAATCGATATCTTGGCCCCACGTTCATGCCATTTTTTAG AAGTGATGTGCGTCTACAGCATTAGAATCTAGAGCCATGCCACGTTTTAC AGTAAAATATTGATCGATCTTGATCGATCACAGTGGTAGGCACGTGGAAG CAAGTCACGCTTATGGAGGGTAGCCATCCCGAATCATCCCGTAACGGTAA CGAACGCCGTACTCGTCCACTCGAAACGCCCGTCCAAGGTGTTTTTCGTC GCGGGCGATGTCGGAGGAGACGCCGATATGATCGAGAAGCATTACCTTCA ACGAGTCATGAGCGTTCAGAGGGCCATTGAGCGGGCCAGCATCGTCAGCG ATGTTAACGGACAGCCCGCGAGCCTGGAAGATCTCTGCTTCCGACCGATC GATGGAGAAGGGTGCCTGGTGGAATCTCCGTCGCAGTACTGGCTGGGAGA TCCCGTGCTGTTGGCTGACGACGGAAACCCAAGCCTGACCGCGGCTTGTC AGACGACCGACGCCTTCCTGTCGACTAGGAGCCCCTGCATGGACCGGGTG GGAGATTTTTTAACTTCACGGTCGTGGCTTGTGGTCAACTTTTTCAAGTA TACAGTATATAGTATACACTGATAAGAACTCACGATAAATAACAGAGTAG TGTATTCGGTTTGGTTAATTTCTCTGAAGATGTAGAGGAGGGAGAAAAAG GAGATCGCGGATCCTGTTGGAAACCCACTAGCGTTTCCCGTTAAGACGGT TCGAGTGACGGTTCGAGTGTTTGAAGACGGCCATTGAACCACACGCTCGA TAAGGCGGTACATCTCGAGTCTCTTTAGGGTGTACCGTACGGTTTAAGCA AGCTGCCTCAGAAGAAGCCCGACCCTGCATCATGTAGCATCATCATCCTA TCTCACGACATATCACGATATGTCACATTTTTTTTATTATTTCCCCGAAC AAAATGAATATGCCAACCATCGGCAAACACTCCGTCTGCACTCCCCTGTC TTTATTGAAACGCCTCCAGATTGGAACTCCAGTAATGCGGGAGGTGGTGT TCGGCGATATCGGCGTGAACAGCCAGGTGATCAGCCCAGATCCTTGCGGA GGCGCAGTGGCTACCGCGGGGGCCCTGGTACTAACATTTCTCCTCAACAA CTACCCGGATCCCGACTTCCAGAGGTTGGCTCAGCAGTGGGAGAAAGAGG TGGGATATTCGACGTTGGTAATGGATGTTGGGTACACTGCTGCGTATCGT GATGTTCGTTATGGCAGATAGTAGTCTTAGCTTGTAACATAATCTGCTGC GGTCGTGGGGTCGGTCGACAGATCGACAGTTGGACAGATTTCTCTGGCGC GCCGAGAGAGTGGGGGGGACTTGTACTGGATCGTTAGGACATTTTAATAC CGATTCTACACGGTGGCTTCGTACATACACCGGTACACGCTTGTGAGTAA CTCTGGAGGGCTTACAACGAGACTGGGGGTAGAAGGGAAATCAAGCGTTG AATTTTCGTTGCTGCCATCTCCCCTCCTTCAGACATACGCTCATATCACC GCCATAGGATCTTATCCAGCGTTCTACAACAATATGATATATTAATATTG AGGAGCGCTCGTCATTCACTTATCCTGGTTTGTTTTTTAATCAAAATACT CATCTGTTCCTCTCTTTTATATCTTAATCGAAGGTATTACTTACCGTGGC GGAGGAGGCGAAAGCCTTACTGGAGAATGATGTCCAAGCGCCTATGAAGG TGAAAGTGAAGGTGCTGTACGGTCCTTTACCGTGGTGTACAGTATGTGAT GGTGTAGACTAGTATAGCATAGCATTAGGAGAGATCGTCGTGCCTTCCAG CAGAGTCGAGGGTAATCGACAAGCATGCGTGCATGCGTGGAAGGATAGGT GCCCCAAAACTTGTAAGGATATATTCGTTGGCTGCCAAAAAATTGTGCCC AAGGGCAGCAATGTACACATTCGAACCTGACGATATTTGGTCCCCTGGAC TTCACCTCTCATGGTGCTAAGAAGGTTTGGGTGTTCGGAGGGTTTGAATT AGTTTATTATGTTTTCAAAGAAAAGCCCCACGGATGTATTACCTCCCATT TAGCGATGCATACGACAACGACATGTTACCTCACTGTTGACCATCGTCGA CCATCTTCGGGGTTTGGTGTTAGTGTTGATCAGAGACAACGACGTCTAGA CACGCGGTCTCGTCTCTTAACCTCGTTCTCTAAACTTCATCTCTCCCTCG TTCGGTCCGGCAGCTTACTTCTCACCCTTCTCACCGGTCGAAAACGGTCG AAAATGGCCGAGACCACCAAATCATCGAACCCTCGCATCGGTTGTTTTCT CGACCCCCCCTGTTGGCTGTTTCGCGCTACTAGGTACACTACCTACTGCA ACCCAGTGGACGGACGGGACGGCCGAGTCAAAGCCTAAACCGTCAGAAGT TATAGCTCTTCAGTGGTATGACAACGTTGCTCCGCTTTGTCGCTGCTGTT GCCATGCGATGCCCGTGCTGCCCTTCTGGAACAGGTGTCGTATATGGCAC AGCGGTCGGTGGAGGACAGCCTCGAGGTGGAAGCGGGGGAGAACGCGTGG GTCCTGGGCGTTTCGTACCTATGCATGTTTCTCTACGTAGCTCTCGTTCT CGGACACCCTTGCGACGCGATCAGGTGATGACGTCCTCAACGAATAACGT GCTCAACGCTGCGAAAGGCGCACGTTATGTTGTTTAGACAATTACATTTT CTGTGTGATAGACTTTGACTACAATGCCTTCGAAGGCGATAACTGCCGTG TAGGTGGACTATGGCAATCATGTTGGTCGACTTATTACCCTTTCTTTCTG AGCAGGTATGCTGTACTGTGCGCTTACTACTCCCCAGGATATTCTGTAAC GGTTAGGGTTGAGGTTACCTCCGTGGCGTGTTTATATGGTTATGGTCCCT CGCGGCAGGTCGAGGTACTCCCTAGCTCTGACCGGAGTCGCCATCGTGGT GTCCAGCCTGGCGATCACCATAGGTCTCCTTTCGCTTGCCGGTGTGGGCA CTACCCTCATCGTGTGGGAGGTGAATCGTACTCCTTCGAAGTATCGTGGC TAGAGCGCAGGATAGTATTTAGTTGTATCGAGTGGAGGTGAAACGTGCGC TACTTTGAAGTATATTATATTATTTTCAATACAATAGTTCCATCGTGACA AAAGCGTTTCGGCATATAGGCAATATATACAATATAGGCAATATAGACAA TGTAGACCCACAGAATCAGACAGCGACCCAACCATCGCAGGCAGGGCTGG ACCATCGAGGACGAGGACGTGGATATGGACCTGTGCCTTGATGAGTTTAT GGGCCGCACAAGTGCACTCAATGCAGTATACACTATATTACTATTAATAT TACTATTATGATGTGGAGCTACTGGTCGTGATATGTCCAGGTGTCCCCCA TTTTTTGGTGGTTAGTGTTTTGTCCCCTGGTTGCTTCGACCATGAGACCT CACTCGGTAGCTGTTTCCCACTCCGTACTCTCTGTAATAGAGTTTCTCCG CCGCTGCCTGCTCCGTCCCCTACTGGTAAGGTGGTTCCGTTTCTCACCCT GGCCATCGGTGTGGACAACATGGTGATCTTGTCGCGGGAGTTCGACAGGT GCCGAGGCCTTCGCCTGTCCTCTCCCCCCCAAACGAAATTCTCGCCCGTC TGCCTTCAAACTCTTGATCTTCTCGTGTGCGTGGGGTGTAATACATATAC CTATATTCTGTAATAATAGTAGCATACGGAGGGTTCTACCACTACAACTA ACTACCACTACAACTATATACATTGCATTTTAGACGGGCATTTGAAAAAG GAAGCAAACATTGAATGAAGTACTCGGTTCCGTTTTGTTCCGTTTTGTTT AAAAGGGCCCTCCCTCACCCTGAATTTTAAGCGGAAGCACGGATTCGTCG TGTACACAGACACTCACAAATATCATTGACCCCCCATTTGGAGGACCAAT GCGAGTAGCCTAGAATTACTAGCATGACAGGGCCGAATTGCGCGGTTATG TGCAATTTAATAAATTAACACGCACGCACGTTGTAGTTAATTCCGAGGGA GTAGGGAGTGACGTTTCAACCGAGAGTTATGGTTGAATACTTGCGCATTT CTCGCCTTAGTATATTATTATATTCACGAAAAGTTCCCCCCAGTGTTAAT ATTATTATAATGACTACCGGTACCGTTTAGTATTTAGTATAGTGCCTTAT TAATACCTACCGTAGTAGTTAGGGACAATGGGCAATGGGCAACTTAATAA ACACACACACTCCTTTGCCACGTCTGATCAGAGGTTTTTGGAGAAAATAT TATTGACCATTGGGAGGATTGGCTATTAATGGGTGTAGCTTAAAATGACT ATTAATGAGTGTAGCCTAGAATGGCTATTAATGGGTGTAGCCTAGAATGA CTATTAATGGATGTAGCCTAGAATGACTATTAATGGGTGTAGCCTAGAAT GACTATTAATGGATGTAGCCTAGAATGACTATTAATGGGTGTAGCCTAAA ATGACTATTAATGAGTGTAGCCTAGAATGACTATTAATGGGTGTAGCCTA GAATGACTATTAATAGCATGTCAGGGCCAGAGTCGGATTGCGCGGTGATA TTCAATTTAATAAACACAAATACTACGCACAATACATACTCCGCACCATC AGGTTGGAGACCGCTCCGGAGTTCGAGCCGTGTGCATCAGCTATGGACAG CAATAACGACAAGGAAGTGACGCACGAGCGAGGGGCGGGACCAACATTCG CGTGGGTGACGTTGGGATCTCTTGGGAGCAGGGGAAGACGGGGAGAAGTC GAGGGGAAGACGAGGGAGTCGCGCTTGGAGCAAAGAATGGGAGCCGCCGT CTGCAAGGTGGGACATTGCGGAGGGCGAACCTATCCACCCATCGATCAAT CGATAATTTGGCGTCGGTTATTTAGAATAAAGTATAAAGATATAGCTCTG TATTTAACGATATAATGCCTAAATGTACTGTATAATGTATGCGATGTTAA TATAACGTTTGTCCCTAACTGCATCTACATACCGTGACTAAATGGTATTA ATATTGAATGTCTATCGATCTATAGTATATAATATATAGTATTATATTTT ACTTTCTTTTGCGATGTTAGATGTTAGATGTTACCCTTGGCTGATTACTG AAGACTGACGAAAGTGATGACGGACTGACAGGTTGCTCCTTCCATCCTGG GTGCGGCGGTATGCGAAGCCGTGGCGTTTCTGGTGGGGGCTTTGACTGAC ATCCCCGCCCTCAGACAGTTTTGCCTCGTGGCTGCCACGGCCGTAGCGGT GGGCTTCTTGCTGCAGGTGACGAAACACTAACACTACACTAACAAAAACA CTAGCAAAAACACTAACAACACTAATAATACTGTAATATACTGTAATATA CTGTAATAGCATAAACCGCTAAGTAAGGTAGATCGAGGTCGATCGATCTA CAGGAGAGAGAAATCACTTGGTTTTCTGTTGGCGGTTCACGATTAACGAT TGGACCTTTTGTTGTCTAGTCTGGCGGGTTGGCATCCCCTCTGTCATCTA CTGTAGTGGTCTAGTCTAATATATTACAGTATATTACAGTATATTCTATT CTAGTGTAATATTCGATAATACTAGATAGTAGTATGCCAACGCCCGGTGT GTGTTGATTCTTAATGCTGTATGAATTAATTCTGAGTCGTAACCAATTTA TCCCTGTGTGTGTTAGGTGACTTGGTTCATGGCCGCACTCTATTTGGACG CGAGGAGGGTCAGTCAGGAGAGACTCGACGTCGCACCCTGGCTG
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Coding sequence (CDS) from alignment at H-elongata_contig12984:320..7013+

>mRNA_H-elongata_contig12984.2177.1 ID=mRNA_H-elongata_contig12984.2177.1|Name=mRNA_H-elongata_contig12984.2177.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2808bp|location=Sequence derived from alignment at H-elongata_contig12984:320..7013+ (Himanthalia elongata Himel1 dioecious)
ATGGAATGTCGCTTCGTCCACCGCTTCCTGCAGGTCCCCCCGAACAGCCT
AGCGAACCGTCAAAAGGAATACTTCGATGATAACTTCTCGCCCTTCTTCC
GTGTCAATCAGATGGAATGTCGCTTCGTCCACCGCTTCCTGCAGGTCCCC
CCGAACAGCCTAGCGAACCGTCAAAAGGAATACTTCGATGATAACTTCTC
GCCCTTCTTCCGTGTCAATCAGGTGTTTTTCGTCGCGGGCGATGTCGGAG
GAGACGCCGATATGATCGAGAAGCATTACCTTCAACGAGTCATGAGCGTT
CAGAGGGCCATTGAGCGGGCCAGCATCGTCAGCGATGTTAACGGACAGCC
CGCGAGCCTGGAAGATCTCTGCTTCCGACCGATCGATGGAGAAGGGTGCC
TGGTGGAATCTCCGTCGCAGTACTGGCTGGGAGATCCCGTGCTGTTGGCT
GACGACGGAAACCCAAGCCTGACCGCGGCTTGTCAGACGACCGACGCCTT
CCTGTCGACTAGGAGCCCCTGCATGGACCGGGTGTTTTTCGTCGCGGGCG
ATGTCGGAGGAGACGCCGATATGATCGAGAAGCATTACCTTCAACGAGTC
ATGAGCGTTCAGAGGGCCATTGAGCGGGCCAGCATCGTCAGCGATGTTAA
CGGACAGCCCGCGAGCCTGGAAGATCTCTGCTTCCGACCGATCGATGGAG
AAGGGTGCCTGGTGGAATCTCCGTCGCAGTACTGGCTGGGAGATCCCGTG
CTGTTGGCTGACGACGGAAACCCAAGCCTGACCGCGGCTTGTCAGACGAC
CGACGCCTTCCTGTCGACTAGGAGCCCCTGCATGGACCGGATTGGAACTC
CAGTAATGCGGGAGGTGGTGTTCGGCGATATCGGCGTGAACAGCCAGGTG
ATCAGCCCAGATCCTTGCGGAGGCGCAGTGGCTACCGCGGGGGCCCTGGT
ACTAACATTTCTCCTCAACAACTACCCGGATCCCGACTTCCAGAGGTTGG
CTCAGCAGTGGGAGAAAGAGATTGGAACTCCAGTAATGCGGGAGGTGGTG
TTCGGCGATATCGGCGTGAACAGCCAGGTGATCAGCCCAGATCCTTGCGG
AGGCGCAGTGGCTACCGCGGGGGCCCTGGTACTAACATTTCTCCTCAACA
ACTACCCGGATCCCGACTTCCAGAGGTTGGCTCAGCAGTGGGAGAAAGAG
GTATTACTTACCGTGGCGGAGGAGGCGAAAGCCTTACTGGAGAATGATGT
CCAAGCGCCTATGAAGGTATTACTTACCGTGGCGGAGGAGGCGAAAGCCT
TACTGGAGAATGATGTCCAAGCGCCTATGAAGGTGTCGTATATGGCACAG
CGGTCGGTGGAGGACAGCCTCGAGGTGGAAGCGGGGGAGAACGCGTGGGT
CCTGGGCGTTTCGTACCTATGCATGTTTCTCTACGTAGCTCTCGTTCTCG
GACACCCTTGCGACGCGATCAGGTGTCGTATATGGCACAGCGGTCGGTGG
AGGACAGCCTCGAGGTGGAAGCGGGGGAGAACGCGTGGGTCCTGGGCGTT
TCGTACCTATGCATGTTTCTCTACGTAGCTCTCGTTCTCGGACACCCTTG
CGACGCGATCAGGTCGAGGTACTCCCTAGCTCTGACCGGAGTCGCCATCG
TGGTGTCCAGCCTGGCGATCACCATAGGTCTCCTTTCGCTTGCCGGTGTG
GGCACTACCCTCATCGTGTGGGAGGTCGAGGTACTCCCTAGCTCTGACCG
GAGTCGCCATCGTGGTGTCCAGCCTGGCGATCACCATAGGTCTCCTTTCG
CTTGCCGGTGTGGGCACTACCCTCATCGTGTGGGAGGTGGTTCCGTTTCT
CACCCTGGCCATCGGTGTGGACAACATGGTGATCTTGTCGCGGGAGTTCG
ACAGGTGGTTCCGTTTCTCACCCTGGCCATCGGTGTGGACAACATGGTGA
TCTTGTCGCGGGAGTTCGACAGGTTGGAGACCGCTCCGGAGTTCGAGCCG
TGTGCATCAGCTATGGACAGCAATAACGACAAGGAAGTGACGCACGAGCG
AGGGGCGGGACCAACATTCGCGTGGGTGACGTTGGGATCTCTTGGGAGCA
GGGGAAGACGGGGAGAAGTCGAGGGGAAGACGAGGGAGTCGCGCTTGGAG
CAAAGAATGGGAGCCGCCGTCTGCAAGGTTGGAGACCGCTCCGGAGTTCG
AGCCGTGTGCATCAGCTATGGACAGCAATAACGACAAGGAAGTGACGCAC
GAGCGAGGGGCGGGACCAACATTCGCGTGGGTGACGTTGGGATCTCTTGG
GAGCAGGGGAAGACGGGGAGAAGTCGAGGGGAAGACGAGGGAGTCGCGCT
TGGAGCAAAGAATGGGAGCCGCCGTCTGCAAGGTTGCTCCTTCCATCCTG
GGTGCGGCGGTATGCGAAGCCGTGGCGTTTCTGGTGGGGGCTTTGACTGA
CATCCCCGCCCTCAGACAGTTTTGCCTCGTGGCTGCCACGGCCGTAGCGG
TGGGCTTCTTGCTGCAGGTTGCTCCTTCCATCCTGGGTGCGGCGGTATGC
GAAGCCGTGGCGTTTCTGGTGGGGGCTTTGACTGACATCCCCGCCCTCAG
ACAGTTTTGCCTCGTGGCTGCCACGGCCGTAGCGGTGGGCTTCTTGCTGC
AGGTGACTTGGTTCATGGCCGCACTCTATTTGGACGCGAGGAGGGTCAGT
CAGGAGAGACTCGACGTCGCACCCTGGCTGGTGACTTGGTTCATGGCCGC
ACTCTATTTGGACGCGAGGAGGGTCAGTCAGGAGAGACTCGACGTCGCAC
CCTGGCTG
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