prot_H-elongata_contig129625.2164.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129625.2164.1
Unique Nameprot_H-elongata_contig129625.2164.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig129625.2164.1 vs. uniprot
Match: D8LGL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL4_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.760e-21
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0 
Query:    1 FTLLDKEVSLDSVESTLWSLENDTETEDEIMEGDPLDLGEIAAQAVALCIDPFAKRPKAAGGADEG-GTGEG 71
            F+   +EVSLDSV+STLW+LE DTET+DEIMEGDPLDLGE+AAQ +ALCIDP+AK P     +D G G GEG
Sbjct:  217 FSTAIQEVSLDSVQSTLWALEEDTETDDEIMEGDPLDLGEVAAQGLALCIDPYAKHPDFVASSDAGSGNGEG 288
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129625.2164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGL4_ECTSI2.760e-2168.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129625contigH-elongata_contig129625:1614..1826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129625.2164.1mRNA_H-elongata_contig129625.2164.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129625 1614..1826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129625.2164.1 ID=prot_H-elongata_contig129625.2164.1|Name=mRNA_H-elongata_contig129625.2164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
FTLLDKEVSLDSVESTLWSLENDTETEDEIMEGDPLDLGEIAAQAVALCI
DPFAKRPKAAGGADEGGTGEG
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