prot_H-elongata_contig102459.215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102459.215.1
Unique Nameprot_H-elongata_contig102459.215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
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BLAST of mRNA_H-elongata_contig102459.215.1 vs. uniprot
Match: D7FQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ22_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.160e-40
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 0 
Query:    1 MPRHQRQQGCAPLLP-IGEVDRIDAVVDHIVSEPMVRAKLSDFASDLPCVQSGTCPVPAFRCPKGHVWASNGKPVCFYCPVCADSRVTRFGHERRQKKDLEVMKDLAKARGGVCLSKAYRG 120
            MP++QR QGC PLLP IG   +   VVDH+  E      LS++ SDLPCVQ+GTCPVP FRC KGHVW  NG PVCFYCP+CAD+R+T      ++K+DLE M+++A+ +GG C+++ Y G
Sbjct:   26 MPKNQRPQGCGPLLPPIGTGGKQVVVVDHVAPELDKIRHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITT---RMKRKRDLEAMQEIARGKGGECIAEEYLG 143
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BLAST of mRNA_H-elongata_contig102459.215.1 vs. uniprot
Match: A0A6H5JCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH6_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 5.000e-39
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 0 
Query:    1 MPRHQRQQGCAPLLP-IGEVDRIDAVVDHIVSEPMVRAKLSDFASDLPCVQSGTCPVPAFRCPKGHVWASNGKPVCFYCPVCADSRVTRFGHERRQKKDLEVMKDLAKARGGVCLSKAYRG 120
            MP++QR QGC PLLP IG   +   VVDH+  E      LS++ SDLPCVQ+GTCPVP FRC KGHVW  NG PVCFYCP+CAD+R+T      ++K+DLE M+++A+ +GG C+++ Y G
Sbjct:  203 MPKNQRPQGCGPLLPPIGTGGKQVVVVDHVAPELDKIRHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITT---RMKRKRDLEAMQEIARGKGGECIAEEYLG 320
[Close]
BLAST of mRNA_H-elongata_contig102459.215.1 vs. uniprot
Match: A0A7H1MJB4_RALSL (Uncharacterized protein n=5 Tax=Ralstonia solanacearum TaxID=305 RepID=A0A7H1MJB4_RALSL)

HSP 1 Score: 50.8 bits (120), Expect = 6.120e-5
Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:   59 FRCPKGHVWASNGKPVC--FYCPVCADSRVTRFGHERRQKKDLEVMKDLAKARGGVCLSKAY 118
            FRC +GH W + G  V    +CP CA  R          ++ +EVM+++A ARGG C+S++Y
Sbjct:  174 FRCAQGHEWETRGVTVTQGTWCPTCARDR---------SRRGIEVMREMAAARGGRCISESY 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102459.215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ22_ECTSI2.160e-4054.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCH6_9PHAE5.000e-3954.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7H1MJB4_RALSL6.120e-538.71Uncharacterized protein n=5 Tax=Ralstonia solanace... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102459contigH-elongata_contig102459:56..1328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102459.215.1mRNA_H-elongata_contig102459.215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102459 56..1355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102459.215.1 ID=prot_H-elongata_contig102459.215.1|Name=mRNA_H-elongata_contig102459.215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MPRHQRQQGCAPLLPIGEVDRIDAVVDHIVSEPMVRAKLSDFASDLPCVQ
SGTCPVPAFRCPKGHVWASNGKPVCFYCPVCADSRVTRFGHERRQKKDLE
VMKDLAKARGGVCLSKAYRG
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