prot_H-elongata_contig1291.2138.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1291.2138.1
Unique Nameprot_H-elongata_contig1291.2138.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length914
Homology
BLAST of mRNA_H-elongata_contig1291.2138.1 vs. uniprot
Match: D7FQ32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ32_ECTSI)

HSP 1 Score: 627 bits (1617), Expect = 1.950e-210
Identity = 439/783 (56.07%), Postives = 539/783 (68.84%), Query Frame = 0
Query:   43 VAVMVGARRDVNEYINAGGDLEVRDDEGATALFHAAFWTHLDVAKDLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRECEGTGVDRQD--EEINDGHDEDEGHHALDMSDEPSAGDASTLVGDPESQ----GKCSRKSPNRPSDGRSTAASMSPRTSRN----HSAKTGAGCGPRD--TRRAHFRVSYPPKINGGGKWHSMTAYMFEPSAHDVVRQAHQARLSGD-HQPFVASNY--VAEDSDPNLPPGTEVVVRPRFPRNFCINPVHATVAWMREANAVSFEVRSPPSASSGAVVGCVDFYLGAVLIGQAHVEMNVVRSNAS---AKEPDILGPVAKMFDAVYVCFAPFDAPLLLPSLERLRRLDIVKLSWPTIDGSERETKDCIREASMFQVYWSAAAQKDGRVKSELNYAASLAKNGALAVRGIYWDPSMNPSSIETDQGIVFPVRLHNSFLLEDPSIIIALMQNKTSSSLAYDSRTMPKSQGEARNNENYLDYESGARDGAAGRERMAQENTERFVEKLCTTAVISTRSHVTMLRQLVGDASVVDLPRLVWMFPDDGGKPGGVDLEDASWLSKPIIIGFLCPISMKAGRCGEDGWGYRMVLPRGWVSKIGIALKIGAVIVAAAIDAGKIDELPIPMPPKTDAGGAGKD-EGSMSLEEWRGKVVDAVYDGLASTVNAKTNEMVDSAFMEFHTNEGGSSPPPAAQFCKDTKHSYANLRSLIH-RHDK 805
            +AVMVG RR V ++IN  GDL+ +DD+GATALFHAAFWTH+++AKDL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                R+CEGTGVDRQ   E  +D         +  +S+ PSAGD ST+VGDP  Q    G  S KSPNRP D RS AAS SPRTSRN    H+  TG      D  + RAHFR +Y P I GGGKWH MTAY+FEPSAH  VR AHQAR+ GD H PFV S+     ED D  +PPGT+VVVRPRFPR  C++PV++TV WM++ +AV FEVR P S SSG + G VDFY+GAVLIGQAHVEM+VV+ N S   A +PD+LGPVAK FD +YVCFA  D PLL+PSLE   RL I  + W   DG+E++TK  IRE+S+FQ+ WS +A++  RV+ E+ YA+SLAK G+LAVRGIYWD +M+ +SI+T  G++FPVR+HNSFLLE+    +      T+SS    +       G++   E+  D+  GA         +A  N    VEKL T AV  TR HV+ LR +VG A+ VD PRL W++PDD GKP  VD+    WL KPI + FLCPISMK G CG+DG GY++ LPRGW SKIG+ALKIG V+VAAA DA ++  LP+P  P +     G+D EG  SL + +G +V+A +DGLA  V  K N+++DS FM+  T    S+ P  AQ CK+ K SY NL SL+H ++DK
Sbjct:    1 MAVMVGDRRAVKKFINGSGDLDEKDDDGATALFHAAFWTHVEIAKDLISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGASSEVLNHMGQTPRQCEGTGVDRQPDGENFDDXXXXXGPRGSGAVSEAPSAGDESTVVGDPGVQDRDAGFSSGKSPNRPHDERSAAASSSPRTSRNRSGAHAGDTGRAKENVDAASTRAHFRAAYRPTIRGGGKWHPMTAYLFEPSAHSAVRNAHQARIDGDQHHPFVDSDNGNAVEDCDKTIPPGTQVVVRPRFPRTCCVSPVNSTVVWMKDVHAVPFEVRPPASTSSGTISGYVDFYIGAVLIGQAHVEMSVVKPNDSSGAADKPDVLGPVAKAFDTMYVCFAAADKPLLIPSLEWFNRLGIFNIVWRPEDGNEKDTKRLIRESSIFQICWSMSAKESDRVRHEVKYASSLAKAGSLAVRGIYWDSTMDVTSIQTAHGLMFPVRMHNSFLLEEACAFLLDRAADTASSTPETATGALAGGGQSARVEDDGDHNDGA---------VAVPN----VEKLNTAAVQHTRGHVSRLRDMVGGANEVDCPRLAWIYPDDSGKPRSVDITTDEWLKKPIRLVFLCPISMKPGWCGQDGRGYKISLPRGWGSKIGMALKIGVVVVAAASDADEVAGLPLP--PVSAVSSWGEDGEGGKSLTQMQGDLVNAAFDGLAGAVPDKWNDLIDSTFMDAETET--SARPATAQLCKEVKQSYKNLSSLLHQKYDK 766          
BLAST of mRNA_H-elongata_contig1291.2138.1 vs. uniprot
Match: A0A6H5JCB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB7_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.280e-38
Identity = 101/219 (46.12%), Postives = 132/219 (60.27%), Query Frame = 0
Query:  693 IALKIGAVIVAAAIDAGKIDELPIPMPPKTDAGGAGKD-EGSMSLEEWRGKVVDAVYDGLASTVNAKTNEMVDSAFMEFHTNEGGSSPPPAAQFCKDTKHSYANLRSLIH-RHDKGFERTGLVRVSHEDTTNVEWVHPSVAHLFRRQGPAIFHIKALEAADAEAATRNATTRERARGFHDSALTCRDIRQEGGRLDGM-NVMSTLRLLEDQIVAMMDGG 908
            +ALKIG V+VAAA DA ++  LP+P  P T     G+D EG  SL + +G +V+A +DGLA  V  K+N+++DS FM   T    S+PP  AQ CK+ K SY NL SL+H ++DKG E+      S   +   EWVHPSVA LFR QGP++F   AL  ADA+AA R A  R + +    S         +GG   G  +VMSTLRLLE Q++AM  GG
Sbjct:    1 MALKIGVVVVAAASDADEVAGLPLP--PATAVSSWGEDGEGGKSLTQMQGDLVNAAFDGLAGAVPDKSNDLIDSIFMNAETET--SAPPATAQLCKEVKQSYKNLSSLLHQKYDKGLEKVTYAG-SRGTSPTTEWVHPSVAELFRSQGPSVFGAGALATADADAA-REAVRRHKEQKKRSS---------DGGNRPGSEDVMSTLRLLEKQVLAMAGGG 204          
BLAST of mRNA_H-elongata_contig1291.2138.1 vs. uniprot
Match: F0Y427_AURAN (Flavodoxin-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y427_AURAN)

HSP 1 Score: 87.8 bits (216), Expect = 7.600e-14
Identity = 62/227 (27.31%), Postives = 105/227 (46.26%), Query Frame = 0
Query:  606 VISTRSHVTMLRQLVGDASVVDLPRLVWMFPDDGGKPGGVD--LEDASWLSKPIIIGFLCPISMKAGRCGEDGWGYRMVLPRGWVSKIGIALKIGAVIVAAAIDAGKIDELPIPMPPKTDAGGAGKDEGSMSLEEWRGKVVDAVYDGLASTVNAKTNEMVDSAFMEFHTNEGGSSPPPAAQFCKD-TKHSYANLRSLIHRHDKGFERTGLVRV--SHEDTTNVEWVH 827
            V +TR    +L  L  DA+  + P+LVWM  +   K   V   L  +SW  KP+ + F+CP++M+  + G+DG GYR+VLP+ W+ K G+A+ +   ++  A+  G               G        M+++  R K  D +Y+ +   ++  T + ++    E                CK  ++ S+  L+  + + D G + TGLV+V      T   EWVH
Sbjct: 1095 VDATRGQTRLLMDLCSDAT--ECPKLVWMARE---KEAAVTRWLTPSSWYGKPVRVQFVCPVTMQVAKSGKDGGGYRVVLPKDWIKKWGVAVNLSLTVLRVAMQLGA-----------ASMGCYHAHVPDMTIDRARLKTADELYEEVNKGLDPATRDALEKGAPE----------------CKALSEASFQMLKGELKKEDPGLDLTGLVKVVGGSGATLCTEWVH 1289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1291.2138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ32_ECTSI1.950e-21056.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCB7_9PHAE1.280e-3846.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y427_AURAN7.600e-1427.31Flavodoxin-like domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 102..131
e-value: 0.013
score: 24.6
coord: 135..164
e-value: 1.3E-4
score: 31.3
coord: 69..98
e-value: 0.0064
score: 25.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 135..167
score: 11.514
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 10.553
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 32..177
e-value: 4.2E-36
score: 126.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 41..175
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 90..164
e-value: 1.0E-11
score: 45.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 36..172
score: 37.533
NoneNo IPR availablePANTHERPTHR24124FAMILY NOT NAMEDcoord: 38..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1291contigH-elongata_contig1291:3808..11613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1291.2138.1mRNA_H-elongata_contig1291.2138.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1291 3808..11613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1291.2138.1 ID=prot_H-elongata_contig1291.2138.1|Name=mRNA_H-elongata_contig1291.2138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=914bp
ERATLFRSSCEQRLSLTKYQDTPSPQRAGKGKISVMSDVDLHVAVMVGAR
RDVNEYINAGGDLEVRDDEGATALFHAAFWTHLDVAKDLVHAGADVNAQR
NDGATPIHVAAKNNQPRMTEVLVGARANLSVQEEFGDTPLHWAYRSKASE
CIEILLAAGADPEVYNHMGKTPRECEGTGVDRQDEEINDGHDEDEGHHAL
DMSDEPSAGDASTLVGDPESQGKCSRKSPNRPSDGRSTAASMSPRTSRNH
SAKTGAGCGPRDTRRAHFRVSYPPKINGGGKWHSMTAYMFEPSAHDVVRQ
AHQARLSGDHQPFVASNYVAEDSDPNLPPGTEVVVRPRFPRNFCINPVHA
TVAWMREANAVSFEVRSPPSASSGAVVGCVDFYLGAVLIGQAHVEMNVVR
SNASAKEPDILGPVAKMFDAVYVCFAPFDAPLLLPSLERLRRLDIVKLSW
PTIDGSERETKDCIREASMFQVYWSAAAQKDGRVKSELNYAASLAKNGAL
AVRGIYWDPSMNPSSIETDQGIVFPVRLHNSFLLEDPSIIIALMQNKTSS
SLAYDSRTMPKSQGEARNNENYLDYESGARDGAAGRERMAQENTERFVEK
LCTTAVISTRSHVTMLRQLVGDASVVDLPRLVWMFPDDGGKPGGVDLEDA
SWLSKPIIIGFLCPISMKAGRCGEDGWGYRMVLPRGWVSKIGIALKIGAV
IVAAAIDAGKIDELPIPMPPKTDAGGAGKDEGSMSLEEWRGKVVDAVYDG
LASTVNAKTNEMVDSAFMEFHTNEGGSSPPPAAQFCKDTKHSYANLRSLI
HRHDKGFERTGLVRVSHEDTTNVEWVHPSVAHLFRRQGPAIFHIKALEAA
DAEAATRNATTRERARGFHDSALTCRDIRQEGGRLDGMNVMSTLRLLEDQ
IVAMMDGGGATAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom