prot_H-elongata_contig129096.2136.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig129096.2136.1
Unique Nameprot_H-elongata_contig129096.2136.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A7S0PUL5_9EUKA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PUL5_9EUKA)

HSP 1 Score: 158 bits (399), Expect = 2.120e-44
Identity = 77/133 (57.89%), Postives = 104/133 (78.20%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPR--RKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTM 131
            MFK+QV+PL+ QLT+L+GNLW+++++G RAERIEYLLLHEFHK KY+ P+K  M + + +  ++     E E      + R+G +  RKK AYAGGLVLEPK+G YD+++LLLDFNSLYPSI+QEYN+CFTT+
Sbjct:  227 MFKMQVLPLTKQLTTLAGNLWAKSLQGKRAERIEYLLLHEFHKLKYVVPDKETMAMRNAKRKAKAADDGEEEVDEDDGSRRNGDQSGRKKPAYAGGLVLEPKRGFYDKFVLLLDFNSLYPSIVQEYNICFTTV 359          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 158 bits (400), Expect = 2.240e-42
Identity = 86/135 (63.70%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGP---RRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            MFKLQV+PL+ QLT +SGNLWSRT++G RAERIEYLLLHEFH  KY+ PE+ +      Q +S+    A  +        + G    +R KAAYAGGLVLEPKKGLYD YILLLDFNSLYPSIIQEYNLCFTT+D
Sbjct:  639 MFKLQVVPLTKQLTCISGNLWSRTIKGARAERIEYLLLHEFHSLKYILPERKF------QDNSKNTKKANLDEEDNELVGKVGGMSRKRAKAAYAGGLVLEPKKGLYDTYILLLDFNSLYPSIIQEYNLCFTTVD 767          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A163MNL9_ABSGL (DNA polymerase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163MNL9_ABSGL)

HSP 1 Score: 158 bits (400), Expect = 2.270e-42
Identity = 78/131 (59.54%), Postives = 101/131 (77.10%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTM 131
            MFKLQ++PL+ QLT+L+GNLW+RTM G RAER E+LLLHEFH+QKY+ P+K +   +  Q +       + E +  S     GP+R+K AY+GGLVLEPKKG YD+Y++LLDFNSLYPSIIQEYN+CFTT+
Sbjct:  757 MFKLQILPLTRQLTNLAGNLWARTMTGARAERNEFLLLHEFHRQKYICPDKSFN--TKPQAAIEALEANDEENAEKSKPKTKGPKRRKPAYSGGLVLEPKKGFYDKYVVLLDFNSLYPSIIQEYNICFTTV 885          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: F4NUJ4_BATDJ (DNA-directed DNA polymerase n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NUJ4_BATDJ)

HSP 1 Score: 158 bits (400), Expect = 2.310e-42
Identity = 84/131 (64.12%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTM 131
            MFKLQV+PL+ QLT+L+GN+WSR++ G RAER EYLLLHEFH +KY+TP+KVY   S+R  S+++    E +     A  + G RRK AAYAGGLVLEPKKG YD+Y+L+LDFNSLYPSIIQEYN+CFTT+
Sbjct: 1738 MFKLQVLPLTKQLTNLAGNIWSRSLTGARAERNEYLLLHEFHDRKYITPDKVY---SNRVVSNQLD---ENDAEGTGAVTKKGGRRK-AAYAGGLVLEPKKGFYDKYVLMLDFNSLYPSIIQEYNICFTTI 1861          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A177WCD4_BATDL (DNA-directed DNA polymerase n=2 Tax=Opisthokonta TaxID=33154 RepID=A0A177WCD4_BATDL)

HSP 1 Score: 158 bits (400), Expect = 2.330e-42
Identity = 84/131 (64.12%), Postives = 105/131 (80.15%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTM 131
            MFKLQV+PL+ QLT+L+GN+WSR++ G RAER EYLLLHEFH +KY+TP+KVY   S+R  S+++    E +     A  + G RRK AAYAGGLVLEPKKG YD+Y+L+LDFNSLYPSIIQEYN+CFTT+
Sbjct: 1690 MFKLQVLPLTKQLTNLAGNIWSRSLTGARAERNEYLLLHEFHDRKYITPDKVY---SNRVVSNQLD---ENDAEGTGAVTKKGGRRK-AAYAGGLVLEPKKGFYDKYVLMLDFNSLYPSIIQEYNICFTTI 1813          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A1X2HXQ7_SYNRA (DNA polymerase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HXQ7_SYNRA)

HSP 1 Score: 156 bits (395), Expect = 1.070e-41
Identity = 79/132 (59.85%), Postives = 101/132 (76.52%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            MFKLQ++PL+ QLT+L+GN+WSRTM G RAER EYLLLHEFH+QKY+ P+K  +  S+    +      + E + P   A+S   R+K A+ GGLVLEPKKG YD+Y+LLLDFNSLYPSIIQEYN+CFTT++
Sbjct:  725 MFKLQILPLTKQLTNLAGNMWSRTMTGARAERNEYLLLHEFHRQKYICPDKAIIKSSAATVDAVEHGDNDDEPAEPKRNAKS---RRKPAFTGGLVLEPKKGFYDKYVLLLDFNSLYPSIIQEYNVCFTTVE 853          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A507EMM9_9FUNG (DNA polymerase n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EMM9_9FUNG)

HSP 1 Score: 156 bits (395), Expect = 1.070e-41
Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            MFKLQV+PL+ QLT+L+GNLW+RTM G RAER EYLLLHEFH +K++ P+K++       G  +  T    E        + G  R+K AYAGGLVLEPKKG YD+++LLLDFNSLYPSIIQEYN+CFTT+D
Sbjct:  780 MFKLQVLPLTRQLTNLAGNLWARTMTGARAERNEYLLLHEFHNKKFVVPDKIF-------GGKKAITNQLHEMEEGDPQPKQGSSRRKPAYAGGLVLEPKKGFYDKFVLLLDFNSLYPSIIQEYNICFTTVD 904          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A8H7W277_9FUNG (DNA polymerase n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7W277_9FUNG)

HSP 1 Score: 155 bits (391), Expect = 3.700e-41
Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            MFKLQ++PL+ QLT+L+GNLWSRTM G RAER E+LLLHEFHK KY+ PEK +    S    +  +          S+T +    ++K AYAGGLVLEPKKG YD+Y++LLDFNSLYPSIIQEYN+CFTT+D
Sbjct:  714 MFKLQILPLTHQLTTLAGNLWSRTMTGARAERNEFLLLHEFHKAKYICPEKTFGGFKSAVIQAAEQDQXXXXXXXXSSTKKKVGSKRKPAYAGGLVLEPKKGFYDKYVMLLDFNSLYPSIIQEYNVCFTTVD 845          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A0B7N996_9FUNG (DNA polymerase n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N996_9FUNG)

HSP 1 Score: 155 bits (391), Expect = 3.700e-41
Identity = 79/132 (59.85%), Postives = 101/132 (76.52%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            M KLQ++PL+ QLT+L+GNLWSRTM G RAER E+LLLHEFHK KY+ PEK +    +    +  + G E   +  SA+ ++   ++K AY+GGLVLEPKKG YD+Y+LLLDFNSLYPSIIQEYN+CFTT+D
Sbjct:  733 MIKLQILPLTHQLTNLAGNLWSRTMTGARAERNEFLLLHEFHKAKYICPEKSFGGPKAAVVQAAEQDGDEEAVAMASASKKTVGGKRKPAYSGGLVLEPKKGFYDKYVLLLDFNSLYPSIIQEYNVCFTTVD 864          
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Match: A0A0L0HLZ6_SPIPD (DNA polymerase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HLZ6_SPIPD)

HSP 1 Score: 154 bits (390), Expect = 4.980e-41
Identity = 82/136 (60.29%), Postives = 101/136 (74.26%), Query Frame = 0
Query:    1 MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPEKVYMLLSSRQGSSRVRTGA----EAETSPPSATARSGPRRKKAAYAGGLVLEPKKGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD 132
            MFKLQV+PL+ QLT+L+GNLW+RTM G RAER EYLLLHEFH +K++ P+K++       G  +V T      E E  P     + G  R+K AYAGGLVLEPKKG YD+++LLLDFNSLYPSIIQEYN+CFTT+D
Sbjct:  780 MFKLQVLPLTRQLTNLAGNLWARTMTGARAERNEYLLLHEFHNKKFVVPDKIF-------GGKKVITDQLHEMEDEGQP---QPKQGSSRRKPAYAGGLVLEPKKGFYDKFVLLLDFNSLYPSIIQEYNICFTTVD 905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129096.2136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0PUL5_9EUKA2.120e-4457.89DNA-directed DNA polymerase (Fragment) n=1 Tax=Coc... [more]
A0A482T3C7_9ARCH2.240e-4263.70DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A163MNL9_ABSGL2.270e-4259.54DNA polymerase n=1 Tax=Absidia glauca TaxID=4829 R... [more]
F4NUJ4_BATDJ2.310e-4264.12DNA-directed DNA polymerase n=1 Tax=Batrachochytri... [more]
A0A177WCD4_BATDL2.330e-4264.12DNA-directed DNA polymerase n=2 Tax=Opisthokonta T... [more]
A0A1X2HXQ7_SYNRA1.070e-4159.85DNA polymerase n=1 Tax=Syncephalastrum racemosum T... [more]
A0A507EMM9_9FUNG1.070e-4159.85DNA polymerase n=1 Tax=Spizellomyces sp. 'palustri... [more]
A0A8H7W277_9FUNG3.700e-4159.85DNA polymerase n=1 Tax=Thamnidium elegans TaxID=10... [more]
A0A0B7N996_9FUNG3.700e-4159.85DNA polymerase n=1 Tax=Parasitella parasitica TaxI... [more]
A0A0L0HLZ6_SPIPD4.980e-4160.29DNA polymerase n=1 Tax=Spizellomyces punctatus (st... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 20..131
e-value: 4.8E-29
score: 101.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..75
e-value: 4.4E-24
score: 87.2
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10coord: 76..132
e-value: 1.8E-20
score: 75.2
NoneNo IPR availablePANTHERPTHR45861FAMILY NOT NAMEDcoord: 1..132
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 28..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig129096contigH-elongata_contig129096:690..1621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig129096.2136.1mRNA_H-elongata_contig129096.2136.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig129096 675..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig129096.2136.1 ID=prot_H-elongata_contig129096.2136.1|Name=mRNA_H-elongata_contig129096.2136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
MFKLQVIPLSCQLTSLSGNLWSRTMRGGRAERIEYLLLHEFHKQKYLTPE
KVYMLLSSRQGSSRVRTGAEAETSPPSATARSGPRRKKAAYAGGLVLEPK
KGLYDEYILLLDFNSLYPSIIQEYNLCFTTMD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR036397RNaseH_sf
IPR023211DNA_pol_palm_dom_sf