mRNA_H-elongata_contig12892.2129.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.020e-20 Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 10 NPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRNAWSIVE 219
+PL WW+++ D+P LA+L RRVLAIPA+QA+SERLFS AG +V+K RN L+P ++LLV +R++W IVE
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.360e-19 Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 1
Query: 13 PLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRN 201
PL WW++K ++YP LASL RRVL IPA QAQSER+FSSAGLVV+K R ++ PE++ L+VF+RN
Sbjct: 480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRN 542
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.470e-18 Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 7 SNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRNAWSIVE 219
+NPL W+ K+ +YP LA+L RRVLAIP+SQAQSER+FS+AGL V+ R++L E+++LLV++RN W +V+
Sbjct: 481 NNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVD 551
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 76.3 bits (186), Expect = 1.950e-16 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 7 SNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVF 192
+NPL WWK + +P LASL + L +PA+ SERLFSSAG +VSK+R LSPEH+ +L F
Sbjct: 31 TNPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 4.010e-16 Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 43 DYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRNAWSIVE 219
D+P LA+L RRVLAIPA+QA+SERLFS AG +V+K RN L+P ++LLV +R++W IVE
Sbjct: 153 DFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A8B8GQ90_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8GQ90_9HEMI) HSP 1 Score: 76.6 bits (187), Expect = 2.810e-15 Identity = 30/66 (45.45%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 4 HSNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRN 201
+ NP +WWK ++ YP ++ L + +L IPAS A SER+FS+AG +++ +RNQ++P H+ LVF++N
Sbjct: 174 NDNPCLWWKARENVYPKISVLAKNILCIPASSASSERVFSTAGNIITPKRNQMTPYHLSALVFLKN 239
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 74.3 bits (181), Expect = 3.660e-15 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 10 NPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFV 195
+PL+WWK ++ +P LA L +L IPA+ SERLFS+AG +VSK+R LSPEH+ +L F+
Sbjct: 78 DPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFL 139
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A8B8G1X1_9HEMI (zinc finger BED domain-containing protein 1-like n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8G1X1_9HEMI) HSP 1 Score: 75.1 bits (183), Expect = 3.830e-15 Identity = 29/66 (43.94%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 4 HSNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRN 201
+ NP +WWK ++ YP ++ L + +L IPAS A SER+FS+AG +++ +RN+++P H+ LVF++N
Sbjct: 114 NDNPCLWWKARENVYPKISVLAKNILCIPASSASSERVFSTAGNIITPKRNRMTPYHLSALVFLKN 179
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE) HSP 1 Score: 72.4 bits (176), Expect = 4.830e-15 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 10 NPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVR 198
+PL WWK+ YP LASL + L IPA+ SER+FS+AG +VS +R+ ++PEH+ +LVF++
Sbjct: 22 SPLEWWKVNAYAYPILASLAKAYLCIPATSVPSERVFSTAGDIVSAQRSLITPEHVDMLVFLK 84
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Match: A0A2S2NF35_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NF35_SCHGA) HSP 1 Score: 72.0 bits (175), Expect = 1.330e-14 Identity = 27/66 (40.91%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 4 HSNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRRNQLSPEHMQLLVFVRN 201
+ NP +WWK ++ YP ++ L + +L IPAS S+R+FS+AG +++ +RN+++P H+ LVF++N
Sbjct: 47 NENPCLWWKARENVYPKISVLAKNILCIPASSTSSKRVFSTAGNIITPKRNRMTPYHLSALVFLKN 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12892.2129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12892.2129.1 >prot_H-elongata_contig12892.2129.1 ID=prot_H-elongata_contig12892.2129.1|Name=mRNA_H-elongata_contig12892.2129.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp QHSNPLVWWKIKKKDYPFLASLTRRVLAIPASQAQSERLFSSAGLVVSKRback to top mRNA from alignment at H-elongata_contig12892:5078..5302+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12892.2129.1 ID=mRNA_H-elongata_contig12892.2129.1|Name=mRNA_H-elongata_contig12892.2129.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at H-elongata_contig12892:5078..5302+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12892:5078..5302+ >mRNA_H-elongata_contig12892.2129.1 ID=mRNA_H-elongata_contig12892.2129.1|Name=mRNA_H-elongata_contig12892.2129.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig12892:5078..5302+ (Himanthalia elongata Himel1 dioecious)back to top |