prot_H-elongata_contig12864.2106.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.500e-10 Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ+ W++A K++ S + H V +L+P++SVPAG V+GTRWV+++K D
Sbjct: 651 MNSPQSTEWEQAMLKELASLDDHDVADLIPVSSVPAGCSVIGTRWVYRVKTD 702
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5JLG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG1_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 1.450e-9 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK D
Sbjct: 1 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKNLD 52
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5JY06_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY06_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 2.600e-9 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH VF LVP++SVP G K++ T++VFK K D
Sbjct: 1 MSSPQPEEWKGACSKEMVNLRKHNVFNLVPLSSVPKGEKILATKFVFKTKLD 52
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.400e-9 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK K D
Sbjct: 574 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLD 625
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.410e-9 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK K D
Sbjct: 349 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLD 400
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.410e-9 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK K D
Sbjct: 574 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLD 625
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.410e-9 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK K D
Sbjct: 574 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLD 625
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 3.410e-9 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
M PQ WK A K++ + KH V+ LVP++SVP G K++GT++VFK K D
Sbjct: 574 MSSPQREEWKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLD 625
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 4.660e-9 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 1 MGLPQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
+ P+ + K A K++ SR KH VF+LVPITSVP KV+GTR+VFK KAD
Sbjct: 387 INSPETKQCKVAIGKELDSRAKHRVFKLVPITSVPKHEKVLGTRFVFKQKAD 438
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Match: J0WMJ3_AURST (Reverse transcriptase (Fragment) n=1 Tax=Auricularia subglabra (strain TFB-10046 / SS5) TaxID=717982 RepID=J0WMJ3_AURST) HSP 1 Score: 57.8 bits (138), Expect = 1.370e-8 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query: 4 PQAARWKEASDKDITSREKHGVFELVPITSVPAGHKVVGTRWVFKIKAD 52
P A +W A ++ S + HGV+E VP++SVPAG +VVG RWVF +K D
Sbjct: 11 PYARQWLAAMGVELQSMDTHGVWEKVPLSSVPAGKQVVGCRWVFDLKHD 59 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12864.2106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig12864.2106.1 ID=prot_H-elongata_contig12864.2106.1|Name=mRNA_H-elongata_contig12864.2106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bpback to top |