mRNA_H-elongata_contig128610.2104.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI) HSP 1 Score: 244 bits (623), Expect = 7.000e-72 Identity = 118/159 (74.21%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 1 STYISAQAAAAKVEAALEGLGATGDLTVTRTLNDNNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALLCSACQVGETPVGYGFVDLTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
STY+SA A+A +VEAALEGL TGDLTVTR+ ND+NGYDWQVTF++PVGDRGALVLDDAYLWSTNDDA +S+ DGDNEV +STGAL+CS CQVGE PVGYG+ DLT +EL+YTIS L+PG++Y V+VSA NRHGQG RA V SG+VTPPL +PS P NV
Sbjct: 16657 STYVSAGASAGEVEAALEGLEPTGDLTVTRSENDDNGYDWQVTFETPVGDRGALVLDDAYLWSTNDDAAASILDGDNEVEESTGALICSDCQVGEAPVGYGYADLTQDELTYTISGLSPGVSYTVYVSAFNRHGQGARAVVDSGVVTPPLAVPSAPTNV 16815
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE) HSP 1 Score: 244 bits (622), Expect = 9.510e-72 Identity = 117/159 (73.58%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 1 STYISAQAAAAKVEAALEGLGATGDLTVTRTLNDNNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALLCSACQVGETPVGYGFVDLTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
STY+SA A+A +VEAALEGL TGDLTVTR+ N++NGYDWQ+TF++PVGDRGALVLDDAYLWSTNDDA +S+ DGDNEV +STGAL+CS CQVGE PVGYG+ DLT +EL+YTIS L+PG++Y VHVSA NRHGQG RA V SG+VTPPL +PS P NV
Sbjct: 9198 STYVSAGASAGEVEAALEGLEPTGDLTVTRSENNDNGYDWQITFETPVGDRGALVLDDAYLWSTNDDAVASILDGDNEVEESTGALICSDCQVGEAPVGYGYADLTQDELTYTISGLSPGVSYTVHVSAFNRHGQGARAVVDSGVVTPPLAVPSAPTNV 9356
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A7S3XK73_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK73_HETAK) HSP 1 Score: 168 bits (426), Expect = 2.170e-45 Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 1 STYISAQAAAAKVEAALEGLGATGDLTVTRTLNDNNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALLCSACQVGETPVGYGFVDLTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
S Y+S++A+ +VEAALE L + GD+ VTR ND++GYDW +TF +PVGDR LV+DD YLW+TNDDAE V+DGDN V + G L CS CQ+GE VGY +VD+ + L T+ LT G+ Y VSAIN++G G+RA +S TPPL P P+NV
Sbjct: 1189 SVYLSSEASEVEVEAALESLPSVGDVDVTRIDNDDSGYDWLITFNTPVGDRAVLVVDDRYLWTTNDDAEIQVYDGDNAVNATNGLLSCSDCQIGEEAVGYNYVDVDASTLELTVDGLTTGVEYQFAVSAINKYGTGLRA--SSVYATPPLFEPLAPMNV 1345
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A836CHM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHM4_9STRA) HSP 1 Score: 161 bits (407), Expect = 7.900e-43 Identity = 88/172 (51.16%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 1 STYISAQAAAAKVEAALEGLGATGDLTVTRTLND--NNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEV-------VKSTGALLCSACQVGETPVGYGFVDLTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGL----VTPPLTIPSPPINV 477
STY+ A A +VEAAL+GL GDL+VTR D GY W VTF +PVGDRGALV+D A+LW+ DA +V DG+N V S LLC C +GETPVGY VDLT+++LSYT++ LTPG Y + +SAIN HGQG+RA + +TPP+T+P PP +V
Sbjct: 1676 STYLWADATGVQVEAALQGLYTLGDLSVTRVNPDPLEVGYKWLVTFITPVGDRGALVVDGAFLWNAEGDATITVSDGNNAVYPSDYKPASSVSKLLCPQCVIGETPVGYRSVDLTADKLSYTVTGLTPGAEYTIAISAINAHGQGIRAIAATNAPLNYLTPPVTVPGPPTSV 1847
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A7S2G428_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G428_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.430e-26 Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 1 STYISAQAAAAKVEAALEGLGATGDLTVTRTLNDNNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALLCSACQVGETPVGYGFVDLTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINVT 480
S Y+ A + +E ALE L G ++V+R L GY+W+VTF++ VGD A+ +D YL++TNDDA+ V+DGD ++ ++TG L +VGE P YG +++++ S+ I LT G Y VHVSA N +G R L+ PP +P P +VT
Sbjct: 398 SQYVPADCSTDLLEDALEMLNTVGQVSVSRELK-TEGYEWRVTFETNVGDIPAIEVDGTYLYTTNDDAQIEVYDGDTDIDEATGLKLYDT-EVGEEPAEYGSQFISADDRSFVIPGLTTGTEYYVHVSARNTYGTSPRTSSDPALLAPPKQVPGVPNDVT 555
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: W2M0B1_PHYPR (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2M0B1_PHYPR) HSP 1 Score: 72.0 bits (175), Expect = 1.160e-11 Identity = 52/155 (33.55%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 103 NNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALL-------CSAC----------------------QVGETPVGYGFVD-LTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
+NG W +TF+S VG+ L++D + + ++ A V DGDN V +TG L CS GE V YG+ + L + +Y I LTPG +Y+V VSA N G G R + +VTPP+ +P PP+NV
Sbjct: 794 SNGRVWTITFESNVGNLAPLIVDSSRISPSS--AFVGVKDGDN-AVDTTGLLCLPDGTTGCSGSWPAAIKTLKQQAAPTKTIAQLSTPGEAAVDYGYYETLDASTTTYNIPGLTPGNSYLVSVSAKNSQGLGARTQSSPMIVTPPVQVPGPPVNV 945
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: W2RJZ0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RJZ0_PHYPN) HSP 1 Score: 72.0 bits (175), Expect = 1.210e-11 Identity = 52/155 (33.55%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 103 NNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALL-------CSAC----------------------QVGETPVGYGFVD-LTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
+NG W +TF+S VG+ L++D + + ++ A V DGDN V +TG L CS GE V YG+ + L + +Y I LTPG +Y+V VSA N G G R + +VTPP+ +P PP+NV
Sbjct: 5015 SNGRVWTITFESNVGNLAPLIVDSSRISPSS--AFVGVKDGDN-AVDTTGLLCLPDGTTGCSGSWPAAIKTLKQQAAPTKTIAQLSTPGEAAVDYGYYETLDASTTTYNIPGLTPGNSYLVSVSAKNSQGLGARTQSSPMIVTPPVQVPGPPVNV 5166
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: V9FZ93_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9FZ93_PHYPR) HSP 1 Score: 72.0 bits (175), Expect = 1.220e-11 Identity = 52/155 (33.55%), Postives = 74/155 (47.74%), Query Frame = 1
Query: 103 NNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALL-------CSAC----------------------QVGETPVGYGFVD-LTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
+NG W +TF+S VG+ L++D + + ++ A V DGDN V +TG L CS GE V YG+ + L + +Y I LTPG +Y+V VSA N G G R + +VTPP+ +P PP+NV
Sbjct: 6694 SNGRVWTITFESNVGNLAPLIVDSSRISPSS--AFVGVKDGDN-AVDTTGLLCLPDGTTGCSGSWPAAIKTLKQQAAPTKTIAQLSTPGEAAVDYGYYETLDASTTTYNIPGLTPGNSYLVSVSAKNSQGLGARTQSSPMIVTPPVQVPGPPVNV 6845
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A329RZI7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RZI7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.670e-11 Identity = 53/154 (34.42%), Postives = 72/154 (46.75%), Query Frame = 1
Query: 106 NGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEVVKSTGALL-------CSAC----------------------QVGETPVGYGFVD-LTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
NG W +TF+S VG+ L++D + + T A V DGDN V +TG L CS GE V YG+ + L + +YTI LT G +Y+V VSA N G G R + +VTPP+ +P PP+NV
Sbjct: 6566 NGRVWTITFESNVGNLAPLIVDSSRI--TPSAAFVGVKDGDN-AVDTTGLLCLPDGTTGCSGSWPAAVKNLNQQAAPTKTIAQLSTPGEVAVDYGYYETLDASTTTYTIPGLTSGNSYLVTVSAKNSQGFGARTQSSPMIVTPPVQVPGPPVNV 6716
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Match: A0A0P1ASK8_PLAHL (Projectin/twitchin and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASK8_PLAHL) HSP 1 Score: 60.1 bits (144), Expect = 1.640e-7 Identity = 48/154 (31.17%), Postives = 67/154 (43.51%), Query Frame = 1
Query: 103 NNGYDWQVTFKSPVGDRGALVLDDAYLWSTNDDAESSVFDGDNEV-------------------------VKSTGALLCSACQV---GETPVGYGFVD-LTSEELSYTISDLTPGIAYIVHVSAINRHGQGVRADVTSGLVTPPLTIPSPPINV 477
+NG W +TF+S VG+ L +D + + N A + DGDN V +K + Q+ GE V YGF + L + Y IS+L PG AY++ VSA N G R+ + VT PL +P P NV
Sbjct: 1792 SNGRVWTITFESNVGNMAPLTVDSSRIAPLN--AFVGIKDGDNAVDTTGLPCLPDNTPGCPGSWPVGAKNLKQQNVPTKTVAQLAVPGEVAVDYGFYEMLNTTSTEYKISNLIPGEAYVMSVSARNSQGLSARSVSSPEFVTLPLQVPGLPANV 1943 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128610.2104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig128610.2104.1 >prot_H-elongata_contig128610.2104.1 ID=prot_H-elongata_contig128610.2104.1|Name=mRNA_H-elongata_contig128610.2104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp STYISAQAAAAKVEAALEGLGATGDLTVTRTLNDNNGYDWQVTFKSPVGDback to top mRNA from alignment at H-elongata_contig128610:361..1266+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig128610.2104.1 ID=mRNA_H-elongata_contig128610.2104.1|Name=mRNA_H-elongata_contig128610.2104.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=906bp|location=Sequence derived from alignment at H-elongata_contig128610:361..1266+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig128610:361..1266+ >mRNA_H-elongata_contig128610.2104.1 ID=mRNA_H-elongata_contig128610.2104.1|Name=mRNA_H-elongata_contig128610.2104.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=960bp|location=Sequence derived from alignment at H-elongata_contig128610:361..1266+ (Himanthalia elongata Himel1 dioecious)back to top |