prot_H-elongata_contig100195.21.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100195.21.1
Unique Nameprot_H-elongata_contig100195.21.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 8.060e-29
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEPTGVKYAKVRCLALLAD  TA+A+IAELGEYA D+D  LARQA+RAVGKIC RLP SAAAAIERLIDLM
Sbjct:  352 RYNEPTGVKYAKVRCLALLADSTTAEAIIAELGEYAGDMDHLLARQAMRAVGKICLRLPGSAAAAIERLIDLM 424          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.960e-15
Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEPT VKY K+  LA++A+  T   ++AEL EYA D+D E++R++IRA+G I FRLP +A   +ERL+  +
Sbjct:  349 RYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYATDVDQEVSRRSIRAIGNIAFRLPSAAGMILERLVGFL 421          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A7S3SC85_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SC85_9SPIT)

HSP 1 Score: 70.9 bits (172), Expect = 9.930e-13
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L  LAD N+A+ +I EL EY  D+D E++R+AIRA+GKI  R+P +A   +  L +L+
Sbjct:   19 RYNEPSYIKQVKIDILTALADSNSAEHIIGELSEYVTDVDAEISRRAIRAIGKIAVRVPSTAELIVGSLTNLL 91          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A7S4RGM6_9DINO (AP complex subunit beta n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RGM6_9DINO)

HSP 1 Score: 71.2 bits (173), Expect = 1.000e-12
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L +LAD  +A+ V++EL EY  D+D E++R+AIRA+GKI  R+P +A   +  L  L+
Sbjct:  335 RYNEPSYIKTVKIEILTMLADAGSAEPVVSELSEYVTDVDAEISRRAIRAIGKIAVRVPSTAEMIVGSLTSLL 407          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A7S1KWR4_ALECA (AP complex subunit beta n=2 Tax=Dinophyceae TaxID=2864 RepID=A0A7S1KWR4_ALECA)

HSP 1 Score: 71.2 bits (173), Expect = 1.010e-12
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L  LAD+ +A+ ++AEL EY  D+D E++R+AIRA+GKI  R+P +A   +  L  L+
Sbjct:  399 RYNEPSYIKTVKIEILTWLADIGSAEPIVAELSEYVTDVDVEISRRAIRAIGKIAVRVPSTAELIVGSLTSLL 471          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A812W4F6_9DINO (BETAA-AD protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812W4F6_9DINO)

HSP 1 Score: 70.5 bits (171), Expect = 1.830e-12
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L +LAD N+A+ V+ EL EY  D+D E+AR+AIRA+GKI   +P ++   +  L  L+
Sbjct:  420 RYNEPSYIKQVKIDILTMLADFNSAEHVVTELSEYVTDVDAEIARRAIRAIGKIAVHVPSTSEMIVTSLTSLL 492          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A813AIR6_SYMMI (DnaK protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813AIR6_SYMMI)

HSP 1 Score: 70.5 bits (171), Expect = 1.910e-12
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L +LAD N+A+ V+ EL EY  D+D E+AR+AIRA+GKI   +P ++   +  L  L+
Sbjct: 1665 RYNEPSYIKQVKIDILTMLADFNSAEHVVTELSEYVTDVDAEIARRAIRAIGKIAVHVPSTSEMIVTSLTSLL 1737          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A812LET1_9DINO (BETAA-AD protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812LET1_9DINO)

HSP 1 Score: 70.1 bits (170), Expect = 2.510e-12
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L +LAD N+A+ V+ EL EY  D+D E+AR+AIRA+GKI   +P ++   +  L  L+
Sbjct:   16 RYNEPSYIKQVKIDILTMLADFNSAEHVVTELSEYVTDVDAEIARRAIRAIGKIAVHVPSTSEMIVTSLTGLL 88          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A812INE5_SYMPI (ApdG protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812INE5_SYMPI)

HSP 1 Score: 69.7 bits (169), Expect = 3.500e-12
Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDLM 75
            RYNEP+ +K  K+  L +LAD N+A+ V+ EL EY  D+D E+AR+AI+A+GKI   +P ++   +  L +L+
Sbjct:  633 RYNEPSYIKQVKIDILTMLADFNSAEHVVTELSEYVTDVDAEIARRAIQAIGKIAVHVPSTSEMIVSSLTNLL 705          
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Match: A0A7S1C8U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.840e-12
Identity = 32/72 (44.44%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    3 RYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAIRAVGKICFRLPESAAAAIERLIDL 74
            RYN+PT +K+ K+  L  +A+ + A  ++AEL EY  D+D E+AR AIRA+G++  R+PE+    IE L++L
Sbjct:  329 RYNDPTPMKHLKLEVLPQVANADNAGEIVAELSEYVSDVDAEMARHAIRAIGQLVVRVPEAGGRVIETLLEL 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100195.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH14_9PHAE8.060e-2984.93B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A4D9CWN1_9STRA1.960e-1550.68B2-adapt-app_C domain-containing protein n=2 Tax=M... [more]
A0A7S3SC85_9SPIT9.930e-1346.58Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S4RGM6_9DINO1.000e-1245.21AP complex subunit beta n=1 Tax=Alexandrium monila... [more]
A0A7S1KWR4_ALECA1.010e-1245.21AP complex subunit beta n=2 Tax=Dinophyceae TaxID=... [more]
A0A812W4F6_9DINO1.830e-1245.21BETAA-AD protein (Fragment) n=1 Tax=Symbiodinium n... [more]
A0A813AIR6_SYMMI1.910e-1245.21DnaK protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812LET1_9DINO2.510e-1245.21BETAA-AD protein n=3 Tax=Symbiodinium TaxID=2949 R... [more]
A0A812INE5_SYMPI3.500e-1243.84ApdG protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A7S1C8U9_9STRA8.840e-1244.44Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..75
e-value: 2.1E-15
score: 58.1
IPR026739AP complex subunit betaPANTHERPTHR11134ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNITcoord: 1..75
NoneNo IPR availablePANTHERPTHR11134:SF4AP-4 COMPLEX SUBUNIT BETA-1coord: 1..75
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100195contigH-elongata_contig100195:112..336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100195.21.1mRNA_H-elongata_contig100195.21.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100195 112..336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100195.21.1 ID=prot_H-elongata_contig100195.21.1|Name=mRNA_H-elongata_contig100195.21.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
MFRYNEPTGVKYAKVRCLALLADVNTAQAVIAELGEYAVDIDPELARQAI
RAVGKICFRLPESAAAAIERLIDLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR026739AP_beta
IPR016024ARM-type_fold