mRNA_H-elongata_contig1285.2095.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig1285.2095.1
Unique Name	mRNA_H-elongata_contig1285.2095.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: D7G910_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G910_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.450e-55
Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 1

Query:   46 SAARGSVGVSGWARRPVAVGALSGIRFGQEPHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAEEEEEAKPKKFAQ 471
            S  RGS      +R P+AVGALSG+R G EPHLLEFHG  CDHC+AM PL ++L     + +KRHMVWE T+NFRLM+ YD+++ C+GLPFFYNRRT +TICGATTW NFK+WA  R+C +  PP  T E++E+A+ KK  Q
Sbjct:   18 SGTRGSSSARKISRTPMAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDLKSRCRGLPFFYNRRTGQTICGATTWSNFKNWALDRNCKSSSPPRMTGEQQEDAREKKLEQ 159

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: M1UWJ6_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UWJ6_CYAM1)

HSP 1 Score: 110 bits (275), Expect = 1.550e-27
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 1

Query:  139 HLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPP 420
            HLLEF+G  CDHC  M PLM++L K  G+ I+R  VW    N RL+   D   +C G+PFFYN+RT   ICGATT+EN K+WA  R    FLPP
Sbjct:   11 HLLEFYGIECDHCVDMEPLMERLQKELGVPIRRFEVWYSDDNLRLLQKLDKNGSCGGVPFFYNKRTKGWICGATTYENLKNWALGRPHQRFLPP 104

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A5J4YT87_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT87_PORPP)

HSP 1 Score: 106 bits (264), Expect = 1.030e-25
Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1

Query:  139 HLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAEEEEE 447
            HLLEF+G  CDHC  M P++++L    G+ ++R  VW    N RL+   D    C G+PFFYN++T   ICGATT+ NFK+WA  +    FLPP    EEEEE
Sbjct:   11 HLLEFYGIECDHCVDMEPVIEQLKHETGLTMRRFEVWYNDDNLRLLQRLDTNGRCGGVPFFYNKKTQYWICGATTYANFKNWAEDKPAERFLPPPKEGEEEEE 113

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A7S1TI71_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI71_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 9.370e-24
Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 1

Query:  130 QEPHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAE 435
            ++ HLLEF+G  CDHC  M P++ +L +  G+  ++  VW    N RL+   D ++AC G+PFFYN +T   +CGATT+ NFK +A  R    FLPP P  E
Sbjct:   12 EKSHLLEFYGIECDHCVEMEPVLDELREETGLATRKFEVWYNDDNLRLLQRLDRDSACGGVPFFYNMKTRGWVCGATTYSNFKAFAQGRPHERFLPPPPKEE 113

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A6V7TAL9_PLAVN (Thioredoxin-like protein, putative n=1 Tax=Plasmodium vinckei TaxID=5860 RepID=A0A6V7TAL9_PLAVN)

HSP 1 Score: 97.1 bits (240), Expect = 5.240e-23
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 1

Query:  136 PHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPP 420
            PHLL FH  +C++C++M PL+KKL    GI+  +  ++E + NF L+   D    C GLP++YN +T+  ICGATT+ N + WAF + C    PP
Sbjct:   29 PHLLAFHSEDCEYCNSMEPLLKKLKDEEGIEFLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRKWAFDKKCNPNEPP 123

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A4V0KAJ7_PLACH (Thioredoxin-like protein, putative n=8 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=A0A4V0KAJ7_PLACH)

HSP 1 Score: 97.8 bits (242), Expect = 1.800e-22
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 1

Query:  136 PHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPP 420
            PHLL FH  +C++C++M PL+KKL +  GI+  +  ++E + NF L+   D    C GLP++YN +T+  ICGATT+ N + WAF + C    PP
Sbjct:  104 PHLLAFHSEDCEYCNSMEPLLKKLKEEEGIEFLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRKWAFDKKCNPNEPP 198

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: Q7RRM3_PLAYO (Uncharacterized protein n=5 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=Q7RRM3_PLAYO)

HSP 1 Score: 95.9 bits (237), Expect = 5.370e-22
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1

Query:  136 PHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDC 402
            PHLL FH  +C++C++M PL+KKL    GI+  +  ++E + NF L+   D    C GLP++YN +T+  ICGATT+ N + WAF + C
Sbjct:   87 PHLLAFHSEDCEYCNSMEPLLKKLKDEEGIEFLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRKWAFDKKC 175

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A7S0LAB2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LAB2_9EUKA)

HSP 1 Score: 96.7 bits (239), Expect = 8.400e-22
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1

Query:  136 PHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAEEEEEAK 453
            PHLL+F G N D+C  M PL  +L +  G+QI+   VW    N  L+  +D    C G+P+F+N++T + ICGATT+EN K WA    C  FLPP    E++++ K
Sbjct:   90 PHLLQFKGRNDDYCALMEPLKVQLAEECGLQIRCFEVWHDAKNLELLRIFD-SGRCGGVPYFFNKKTKRWICGATTYENLKAWALDEVCEPFLPPKELVEKQQQEK 194

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A7S4BKL1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKL1_CHRCT)

HSP 1 Score: 95.5 bits (236), Expect = 1.930e-21
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1

Query:  136 PHLLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAEEEE 444
            PHLL+F G   D+C  M PL  +L + +G++I+   VW+ T N  L+  +D    C G+PFFYN+RT + ICGATT++N + WA    C  FL P    E+++
Sbjct:   80 PHLLQFKGRGDDYCAMMEPLKDRLFEEHGVRIRCFEVWQDTKNLELLRIFD-NGRCGGVPFFYNKRTKRWICGATTYDNLRKWALDEMCDPFLAPRELIEKQQ 181

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BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Match: A0A554K3B1_9BACT (Thioredoxin domain-containing protein n=1 Tax=Parcubacteria group bacterium Gr01-1014_30 TaxID=2017182 RepID=A0A554K3B1_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 4.580e-21
Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1

Query:  142 LLEFHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETACKGLPFFYNRRTNKTICGATTWENFKDWA 387
            L+EF+G  C HC  M PL++KL K  G++I+R  VW  T N  +M   D +  C G+PFFYN++ NK ICG+T++E FK+WA
Sbjct:    5 LIEFYGTECVHCREMEPLIEKLEKEEGLKIERLEVWHNTDNLNIMRELD-KGYCGGVPFFYNKKANKWICGSTSYEKFKEWA 85

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot

BLAST of mRNA_H-elongata_contig1285.2095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G910_ECTSI	1.450e-55	58.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
M1UWJ6_CYAM1	1.550e-27	53.19	Uncharacterized protein n=1 Tax=Cyanidioschyzon me...	[more]
A0A5J4YT87_PORPP	1.030e-25	47.57	Uncharacterized protein n=1 Tax=Porphyridium purpu...	[more]
A0A7S1TI71_9RHOD	9.370e-24	44.12	Hypothetical protein (Fragment) n=1 Tax=Compsopogo...	[more]
A0A6V7TAL9_PLAVN	5.240e-23	43.16	Thioredoxin-like protein, putative n=1 Tax=Plasmod...	[more]
A0A4V0KAJ7_PLACH	1.800e-22	43.16	Thioredoxin-like protein, putative n=8 Tax=Plasmod...	[more]
Q7RRM3_PLAYO	5.370e-22	43.82	Uncharacterized protein n=5 Tax=Plasmodium (Vincke...	[more]
A0A7S0LAB2_9EUKA	8.400e-22	42.45	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A7S4BKL1_CHRCT	1.930e-21	41.75	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A554K3B1_9BACT	4.580e-21	48.78	Thioredoxin domain-containing protein n=1 Tax=Parc...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig1285	contig	H-elongata_contig1285:567..4715 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	187.6
Seed ortholog evalue	4.5e-45
Seed eggNOG ortholog	2880.D7G910
EggNOG OGs	2E3VE@1,2SAVA@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	Thioredoxin-like fold
Ec32 ortholog	Ec-15_002350.1
Exons	4
Model size	471
Cds size	471
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig1285.2095.1	prot_H-elongata_contig1285.2095.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig1285 567..4715 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929762.9453635-CDS-H-elongata_contig1285:566..746	1622929762.9453635-CDS-H-elongata_contig1285:566..746	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 567..746 +
1691679148.34483-CDS-H-elongata_contig1285:566..746	1691679148.34483-CDS-H-elongata_contig1285:566..746	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 567..746 +
1622929762.9596822-CDS-H-elongata_contig1285:1075..1200	1622929762.9596822-CDS-H-elongata_contig1285:1075..1200	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 1076..1200 +
1691679148.35356-CDS-H-elongata_contig1285:1075..1200	1691679148.35356-CDS-H-elongata_contig1285:1075..1200	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 1076..1200 +
1622929762.9693754-CDS-H-elongata_contig1285:4279..4357	1622929762.9693754-CDS-H-elongata_contig1285:4279..4357	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 4280..4357 +
1691679148.3612328-CDS-H-elongata_contig1285:4279..4357	1691679148.3612328-CDS-H-elongata_contig1285:4279..4357	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 4280..4357 +
1622929762.9801621-CDS-H-elongata_contig1285:4627..4715	1622929762.9801621-CDS-H-elongata_contig1285:4627..4715	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 4628..4715 +
1691679148.368856-CDS-H-elongata_contig1285:4627..4715	1691679148.368856-CDS-H-elongata_contig1285:4627..4715	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig1285 4628..4715 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig1285:567..4715+
coding sequence from alignment at H-elongata_contig1285:567..4715+

protein sequence of mRNA_H-elongata_contig1285.2095.1

>prot_H-elongata_contig1285.2095.1 ID=prot_H-elongata_contig1285.2095.1|Name=mRNA_H-elongata_contig1285.2095.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MRLTLIILGCIIGLASAARGSVGVSGWARRPVAVGALSGIRFGQEPHLLE
FHGANCDHCDAMVPLMKKLLKLYGIQIKRHMVWEGTSNFRLMAAYDMETA
CKGLPFFYNRRTNKTICGATTWENFKDWAFSRDCFAFLPPTPTAEEEEEA
KPKKFAQ

mRNA from alignment at H-elongata_contig1285:567..4715+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig1285.2095.1 ID=mRNA_H-elongata_contig1285.2095.1|Name=mRNA_H-elongata_contig1285.2095.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4149bp|location=Sequence derived from alignment at H-elongata_contig1285:567..4715+ (Himanthalia elongata Himel1 dioecious)
ATGCGATTAACCCTCATAATATTAGGCTGCATTATTGGTCTCGCCTCTGC
AGCTAGAGGGAGCGTCGGTGTTAGTGGATGGGCGCGCAGGCCGGTGGCAG
TAGGCGCTCTGAGCGGCATACGCTTCGGCCAGGAGCCCCATCTGCTCGAG
TTCCACGGAGCGAACTGCGATCATTGCGATGTGAGATGGCCCAAGGGACT
TTGATTGAATTCATTTTTTTTTTTACTCTAAACACGGTGAAAATAATGTG
TAGTTCATATTTACTTGGCGACGAGATGCGGTTGACTTTATGATAGTCTG
GCAGCCTGTCGGTGTGAACTTCAAATCGATTTCGCACAGGAGTCAAATCA
CATGATGGATCATGTGGGTATTTGTAGCTAGCTCATTGCACGCTGAAGTT
TGTGTTGTTTGGCGCTACCGCTACTCCACCATCGCTCGTTTCATCGCTTC
TTAACGGCATCCTCGATACATATTTGATACATCTTTGATACATCCTTGAT
ACTGTACAGGCAATGGTGCCTCTAATGAAGAAGCTGTTGAAACTTTACGG
GATTCAAATCAAACGACACATGGTGTGGGAAGGGACTTCTAATTTCCGCC
TTATGGCCGCTTACGATATGGAAACGGCATGCAAGTAAGTACTAATATCA
ATATAATACGATCCACGTGTCTATTAGAGGTTAGAGGTGTATACCGTACA
CACAGACCCACGTGGATGGTTGATGATTTTTCTGCTCCCTCAACTTTATC
CTCAAACGTTATAGTGCTGCACTATGTGTCTGAAATATCTCGATAAGCTG
TTTCGAAGTCTCTAGCCTGCAACTTCGGTACGCCTCTGATACTCTCTGTA
CTATATCGCTATTATAGTATTAGTAATATATCGCACATACGGGACTGCTG
AACCCGTCTCGCGAGACCAAAATCTCAGGCACGAACGGGGACAAGAGAAA
ATTATTTTTCTTGTTCAGCTAACCACAAGTCGGAGGCAACCAAATCCGGT
CGATCTTACTCTGATATATGTGATGACCATACATACATACATACATACTA
AACTAGACAAGACTAGACTAAACGATACTACACCTCTTCCTTCATACTTG
TACGAAGTACGGTACTACACCTCACGGTTTCCAATCCGGATTGTTTTTGG
CCAAACAAGAGCAAAGTACCACAATAACGGTGCAGCGGTGCAAGAAGTGA
TGCAGTCATACGATCGTCTCGATTAATGATCCGAAACTAGGGTTATGATT
CATCTGATTAATCGGACCAATTTACAACGGAATCGGAATCGGAAAATTGA
GACGATGTTTTACCGATGTTTTTCCGATGTTTTCGTTTTAGTGTTTATTG
GCCGTAAGAAGAGAGTGGCGGTATCCCAGACTTGCGGCGAGACTCCTCGT
ATGCGTATCAGTCCATATGCGTGTTCGGTGAAAGCAACCAGCACGATTAT
GATCGTTGGCGGTGAAAAACAGGATCTACACACGCGCAACCCCTTTTGGG
GGGTACCATTTTTGCCTACGCACGCGTGCCCCTGCCGATTCCCATTTGGG
ACGCACACGCTGCGCCACCACAGCGCTCCGGTCATAAGCGCAGCGAATTT
ATCTCCGATCTCCACCGGGCCGGAGGGCGGCGCCGGTAGTGATGCGACGG
CCGTGGTATTAAGCGCGAAAAAGGCTGCGACCGCGGCGAAAATTGACCGC
GTTCAAAACATGCGGAAGATGTCGAAGCCTGACGCCGCGACGCATACTGT
GTGGAAGGGTAGTCTCTTTCAGGTAGACATACCTTATAGTCACCGTGAGG
TCGCCGTGTGCTCGTTGTGCGTCAAGAGAAGATGGATTGGGAGGTGCTTC
GACTGGTGGAGACGCTGTTGAAGCCGTTCATGACGGCGCAAAAACACGTC
GACGCATCCAAGGAAGTGACGGTGAGCTTGGTAGTTCCATACATCGCCGA
CCTGCGGGACAAGCTGGAGGAAGCGGTCGAAAATCTAAAGGTCCAATCAT
ATCTTCCGGACTCGATCGTGGCCAAGGCAAAGAGGGACGTTCTTCTTTTT
GCAGAAGCACTTCAGACTGACCTCGGTCGTCGTTGGGGCGGCGGAAAGAA
CATGTTGGTCTAGAACGAAGAACGAGGGGCTTCGCCGTCAGCCCTGCGGG
TTTAAGAAGGAGCAAGTGGTTGCTACTGCAGTGGATCATTGGAGAAAAAT
CCAGTGTGCGGGATCGATGAGGACGTGCAGCCGGGAGTGTGGGAGGCGGT
TGCCAACGCGGCGGTCGAGGTGGTCCTGGAATCTAAGGCCGCGGAAGGCA
AGCAGAGCGCCGGCGCATCTTCTCTGGTTTCCGTTGAACCTGCCCCCCTC
TCAGCATCAGCGTCGCCGTGGCTTCGCAGCAGCGTCGCCGTGCCTTCGCG
AACTCCTCGGATTCAAGGCACCAGCTGGAGAGCGTCGTCAACCGGGAGTT
GGAGTCTCTCAAGACAACGCCAGGGATAAGAGTGATCTGGAAATATAAGG
GTAAGCTGGTTCGCGGCAAGCCACTTGAGTAGTGGCGTCTCAAGGATCGG
GAGTATCCCATGCTGGCTTCACTGGCTCGCCGGGTACTGTGCATCCCAGC
ATCCCAGGCGTAGTCGGAGCGTGTATTTTCGTCGGCAGGACTAGTGGTGA
CAACGACACGCTCTCGACTGGACCCCGAAAACGTAGAGCTCATGGTGTTC
CTTCGTAATTTTCTACCCGAGGTGGACAATACAAATGGAATGAAAGTGAC
AAGGAGAGGAAAAATGATGAGCTGCAGCCGAAATGAGCTTGAACAAAATC
TCGGAAGCAGCGGTTGGGCAGTCTAGAGCTGTTTGCGGATTAGTCGGTTA
GGTTTGTGGTAAGTGGTAAGGGTATACAAGGAACAAAAAATATCGATTAG
TACATAAGAGGTAATAAAGCCTGTACCTGCTTCGTGCATTTTTGTTTGTC
GTTTCTTCTTTCTCTCTTCTCTTGGTTCCGTTTTTTTGGCGCTGACTGAC
GTGTGTGGGCACTTTTGATGGCGTCGCCATTTGTTTCGTTTTCTTTTTCT
CCAACCCATAAAATATTTCCTTATTTCCCTACGTTGCGAGTGTGGCATAC
ACGACTGAACATCATAAATCCACGCCGCCAGATATGTTACTGTTTTATGT
AGAGTTTTGCGTTTTTTATTTGCGGGGGTTACTCGAAATTTGAGTCAAAA
CTCATGAACACAAACATCATTTGGGTGGATTATGAAGGGAAATTAAGCCA
AATGGCCCTATTTTTTTTGCCTCGGGCGGCGGGAACCAAGGGGGGCTCGC
ACAGCGAGCTTCCAAAGTCAGCACGCTGTGCTCGCCCGATATATCGGACA
TCGACTTGGCCAAAAATATATTTAAAAGATCGGAAAACCCAGCCGATTCA
TAACCCTATCCGAAACACTATTTTACTGAAATACTTTCTTAGCTTTTGTT
TAGATGTAAAGTTTTGGTAAAGGTACCTCTGTGTCGATAGATAAAAATCA
CCTCGGGTTTTCTAATATTTTAAGGGATTTTTTATATATATAAATTGGCC
GTACTGTACAGTGGATAGTGCAACCAATACATGTAAGTGAAATAATGGAT
GCCGAAAGCTGAAAGTGAAAACAACTACCGGAAGTTCGTTCAACTCACCT
TTCCCAGGAACTCGCTCTTGACTTGGAATGTTTTCTAATACTATGTTTTG
TGGTGGACATCAGAGGATTGCCCTTTTTCTACAACAGAAGGACGAACAAG
ACCATATGCGGCGCGACAACTTGGGAAAACTTCAAGGATTGGTAAGAAGC
AGTAGGGCGGTGGTCTGAAAAAGACAACCGCCCGTTCCACCATGCCTACG
GCACTAAACTGTAAACTGTCGATGGAGCAGCGCCGTTAATATTGCCTAAC
AACAGCAATGGCAATAGCATTTCAAATCGCTATTACTATGTTACAGTCGG
AGTTGATACTATTCGAGTCGGATGCAGAGGTTTTAACCGCCACCTAAAAC
CTAGAGGGTTTTGTTGAGAAGCAGCTACTTGAGCAAGCGTGTCGTCTTTT
TATCTTTGCAGGGCTTTTTCCAGAGATTGTTTCGCGTTCCTTCCTCCGAC
GCCGACTGCAGAGGAAGAAGAGGAGGCCAAACCCAAGAAGTTCGCGCAG

Coding sequence (CDS) from alignment at H-elongata_contig1285:567..4715+

>mRNA_H-elongata_contig1285.2095.1 ID=mRNA_H-elongata_contig1285.2095.1|Name=mRNA_H-elongata_contig1285.2095.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig1285:567..4715+ (Himanthalia elongata Himel1 dioecious)
ATGCGATTAACCCTCATAATATTAGGCTGCATTATTGGTCTCGCCTCTGC
AGCTAGAGGGAGCGTCGGTGTTAGTGGATGGGCGCGCAGGCCGGTGGCAG
TAGGCGCTCTGAGCGGCATACGCTTCGGCCAGGAGCCCCATCTGCTCGAG
TTCCACGGAGCGAACTGCGATCATTGCGATATGCGATTAACCCTCATAAT
ATTAGGCTGCATTATTGGTCTCGCCTCTGCAGCTAGAGGGAGCGTCGGTG
TTAGTGGATGGGCGCGCAGGCCGGTGGCAGTAGGCGCTCTGAGCGGCATA
CGCTTCGGCCAGGAGCCCCATCTGCTCGAGTTCCACGGAGCGAACTGCGA
TCATTGCGATGCAATGGTGCCTCTAATGAAGAAGCTGTTGAAACTTTACG
GGATTCAAATCAAACGACACATGGTGTGGGAAGGGACTTCTAATTTCCGC
CTTATGGCCGCTTACGATATGGAAACGGCATGCAAGCAATGGTGCCTCTA
ATGAAGAAGCTGTTGAAACTTTACGGGATTCAAATCAAACGACACATGGT
GTGGGAAGGGACTTCTAATTTCCGCCTTATGGCCGCTTACGATATGGAAA
CGGCATGCAAAGGATTGCCCTTTTTCTACAACAGAAGGACGAACAAGACC
ATATGCGGCGCGACAACTTGGGAAAACTTCAAGGATTGAGGATTGCCCTT
TTTCTACAACAGAAGGACGAACAAGACCATATGCGGCGCGACAACTTGGG
AAAACTTCAAGGATTGGGCTTTTTCCAGAGATTGTTTCGCGTTCCTTCCT
CCGACGCCGACTGCAGAGGAAGAAGAGGAGGCCAAACCCAAGAAGTTCGC
GCAGGGCTTTTTCCAGAGATTGTTTCGCGTTCCTTCCTCCGACGCCGACT
GCAGAGGAAGAAGAGGAGGCCAAACCCAAGAAGTTCGCGCAG