prot_H-elongata_contig128310.2086.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128310.2086.1
Unique Nameprot_H-elongata_contig128310.2086.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
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BLAST of mRNA_H-elongata_contig128310.2086.1 vs. uniprot
Match: D8LH10_ECTSI (Similar to neutral Sphingomyelinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH10_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.100e-36
Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0 
Query:    2 DPYAQEEGPGRVSAVTRLWADLWHYGPGKTKDAFGTEADVRAISGSGNNNWSGFKLRVLNQNLWALPVVSRCMEARVHAFAKTLG 86
            DPYA EEGPGRVS + RL  DLW YG G TKDA+GTEADVRAIS S N +W+GFKLRVL QNLW +PV+SRC+EARVHAFAKTLG
Sbjct:   72 DPYAGEEGPGRVSRLARLRMDLWGYGAGNTKDAYGTEADVRAISES-NQHWAGFKLRVLTQNLWGIPVISRCLEARVHAFAKTLG 155
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BLAST of mRNA_H-elongata_contig128310.2086.1 vs. uniprot
Match: A0A6H5L123_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L123_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 4.200e-25
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:   22 DLWHYGPGKTKDAFGTEADVRAISGSGNNNWSGFKLRVLNQNLWALPVVSRCMEARVHAFAKTLG 86
            DLW +G G TKDA+GTE DVRAIS S N +W+GFKLRVL QNLW +PV+SRC+EARVHAFAKTLG
Sbjct:    2 DLWGHGAGNTKDAYGTETDVRAISES-NQHWAGFKLRVLTQNLWGIPVISRCLEARVHAFAKTLG 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128310.2086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH10_ECTSI1.100e-3676.47Similar to neutral Sphingomyelinase, putative n=1 ... [more]
A0A6H5L123_9PHAE4.200e-2575.38Endo/exonuclease/phosphatase domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128310contigH-elongata_contig128310:276..1338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128310.2086.1mRNA_H-elongata_contig128310.2086.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128310 276..1368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128310.2086.1 ID=prot_H-elongata_contig128310.2086.1|Name=mRNA_H-elongata_contig128310.2086.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MDPYAQEEGPGRVSAVTRLWADLWHYGPGKTKDAFGTEADVRAISGSGNN
NWSGFKLRVLNQNLWALPVVSRCMEARVHAFAKTLGR*
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