prot_H-elongata_contig12799.2066.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12799.2066.1
Unique Nameprot_H-elongata_contig12799.2066.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length293
Homology
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: D7G3G7_ECTSI (ER membrane protein complex subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3G7_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 2.260e-159
Identity = 230/270 (85.19%), Postives = 249/270 (92.22%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGVGPAAMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQSVFDLVGMHDGNAAIFGANSDG 270
            MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLK++KPLDK+ELSYKQTLTRAKRLRGNGRFI  EAF+ RKGYFTAK+GGLLR++DLPGQ NPMANP+KMMGPMKSQMGFV TNMFMM FTSYFFEGFVLVRVPFPLTNRFKVMLQRGV LSTLDASYVSSTSWYFLVMFGL++ IN+FLR+   Q EAKVIQSQLGVG A+MGFDTKKV+ASEADSLDLAPH  +L+DVEKRLLGSKYP  SV+DL GMHD +AA+FGAN  G
Sbjct:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKPLDKEELSYKQTLTRAKRLRGNGRFICREAFSRRKGYFTAKEGGLLRQEDLPGQANPMANPDKMMGPMKSQMGFVGTNMFMMAFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVQLSTLDASYVSSTSWYFLVMFGLKSVINLFLRETPVQHEAKVIQSQLGVGAASMGFDTKKVYASEADSLDLAPHEWLLNDVEKRLLGSKYPTTSVYDLAGMHDDSAAMFGANDGG 270          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A835YX73_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX73_9STRA)

HSP 1 Score: 239 bits (611), Expect = 6.690e-75
Identity = 131/269 (48.70%), Postives = 180/269 (66.91%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAK-------------DG--GLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDA-AAQDEAKVIQSQLGVGPAAMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQSVFDL 253
            M  +HL LDPAIR+W +FPLM+++IL  VLRH +  L +S+KP D D+   +QTL RA+RLR NGRF+  +A+ +R+ YF ++             DG  G L+          +++P KMMGP+ +  GFV+TNMFM  F+SYF  GFV+V+VPFPLT+RFKVMLQRGV +STLD SYVSS SWY LVMFG+R  I + L ++ +AQDE + +Q+Q+G+G     FD KK F  E+  L ++ H+   D VE+RLLG +YP  S+ D+
Sbjct:    1 MVHQHLTLDPAIRNWCLFPLMVVMILASVLRHYVPMLFQSDKPADADDQKLRQTLGRAQRLRMNGRFLHGDAYRARRTYFISEEKEPSKDTEKGLGDGMKGALKNPPAADPTAAISDPSKMMGPLINNAGFVVTNMFMGAFSSYFMAGFVMVKVPFPLTSRFKVMLQRGVEISTLDPSYVSSVSWYMLVMFGMRNLIMLALGESGSAQDEQRAMQAQMGMGAPQPMFDAKKAFGEESTILGISLHAWAGDSVEQRLLGGRYPVPSLLDM 269          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A7S3NPS9_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPS9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.440e-70
Identity = 127/245 (51.84%), Postives = 164/245 (66.94%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFL-RDAAAQDEAKVIQSQLG----VGPAAMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGS 243
            E L+LDPAIRDWVV P++++++L+G+ RH    LLKS + LD  E+ +KQ L R+ RLR  G+FI   +F  RK YF AKD G+L++       NPMANP  MM  MKSQ  +++ NM MM+  SYFF GFVLV++PFPLTNRFKVMLQRGV L+TLD SYVSS SWYFLV+FGLR    + L  D+ A DEA+  Q  +G    VG A   FD    +  E   L +A H+ +L+D E +LLG+
Sbjct:    6 EALLLDPAIRDWVVLPMVVLMVLMGLARHYAQQLLKSSQSLDAMEIQHKQRLMRSARLRARGKFIPASSFNLRKAYFIAKDSGILQKKVKKTAINPMANPMGMMDGMKSQALYMVPNMVMMSVISYFFHGFVLVKIPFPLTNRFKVMLQRGVDLATLDVSYVSSLSWYFLVLFGLRGLFKILLGEDSDALDEARATQMSMGMMHSVGGAHGPFDAPAAYKHERQELQMAQHTWLLEDAETKLLGN 250          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A7S1U0N1_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0N1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.770e-67
Identity = 128/260 (49.23%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPMANPEK--------MMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFL-RDAAAQDEAKVIQSQLGVGPAAMGFDT-----KKVFASEADSLDLAPHSCVLDDVEKRLLGSKYP 246
            M  E LVLDP+IR+WVV PL++M++ +GV+RH I  LLKS+  +D  ++  KQT+ RA+RLR  GRF++  A+A RK +FT KDGG LR       ENP A            MM  MK  + F++ NM MMTF SYFF GFVLV+VPF LTNRFKVMLQRGV LSTL  SYVSS SWYFL+M+GLR+   + L  D AA DEA+++Q                   KK+F +E   L +  + C LD++E++LLG +YP
Sbjct:   63 MADELLVLDPSIRNWVVMPLVMMMLFMGVVRHYIQGLLKSDPVMDAGDIKVKQTVARAQRLRRFGRFVTPRAYAMRKAHFTRKDGGALR-------ENPPAXXXXXXXXXXXAMMDGMKGNISFMVPNMIMMTFISYFFSGFVLVKVPFDLTNRFKVMLQRGVDLSTLHVSYVSSLSWYFLLMYGLRSVFRLVLGEDEAAADEARMMQXXXXXXXXXXXXXXGAPAPKKLFKAEMRGLRVNNYKCALDEIEQKLLGDRYP 315          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A7S2SE12_9STRA (ER membrane protein complex subunit 3 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SE12_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.820e-65
Identity = 117/242 (48.35%), Postives = 156/242 (64.46%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGVGPA-AMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSK 244
            + LVLDP IR+WV+ P++L++ILV + R  +  LLK       + + + Q L+R+ +LR N R ++  AF  R  YF+ K GG LR+    G  NPM NPE MM  MK  +  +I N+ MM + SYFF GFVLV+VPF LT  FK MLQRGV L TLD SYVSS SWYFLVMFGLR    + L + +  D+ K++Q Q+G+G A AM FD KK + +E  +L    H+CV+DD E++ L SK
Sbjct:    8 DELVLDPKIRNWVLLPILLVMILVQIGRSWVQVLLKGNSSGANENVKHMQLLSRSAKLRANNRLLTPVAFNMRLDYFSKKGGGKLRQKVAGGAPNPMQNPEGMMDMMKGNLTMMIPNIVMMGWISYFFSGFVLVKVPFMLTEGFKQMLQRGVELQTLDVSYVSSLSWYFLVMFGLRGLFTLILGENSVPDDTKMMQQQMGMGGANAMQFDPKKAYKAEKTALKYVEHNCVIDDAEEKFLNSK 249          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A7S3M269_9STRA (ER membrane protein complex subunit 3 n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M269_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.070e-64
Identity = 113/263 (42.97%), Postives = 172/263 (65.40%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKD---ELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPL-TNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGV---GPAAMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQSVFDLVGM 256
            M  EHL+LDPAIRDWVV P+++M++LV + R+ +  L+KS   + ++   EL +KQ L +++RLR NGRF+++ AF  RK Y   K  G+LR + +PG  NPM+NP  M+  MK  + +++ N  MM F  YFF GFV +++PFPL +N FK+M+QRGV L++LD SYVSS SWYFLV FG+   + + +      D+AK++Q        G   MGF+ +  + +E ++L +A H  V D  EK+LLG++YP++S  + + +
Sbjct:    2 MAREHLLLDPAIRDWVVIPMVIMLVLVALGRNYVNQLIKSTPVITEESLGELRHKQVLQQSQRLRMNGRFLNDAAFNMRKSYMIRKKTGILR-EKVPGAANPMSNPMNMVDMMKGNIVYMLPNFAMMAFVGYFFSGFVCLKIPFPLPSNHFKLMMQRGVDLTSLDVSYVSSLSWYFLVTFGMNGIMRLIMGGDGEFDDAKMMQMXXXXXXGGAQQMGFNAEAAYKNEKEALGIAKHQWVADSAEKQLLGARYPEESSGEAIDL 263          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: K3WAK6_GLOUD (ER membrane protein complex subunit 3 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WAK6_GLOUD)

HSP 1 Score: 206 bits (525), Expect = 5.890e-62
Identity = 117/250 (46.80%), Postives = 159/250 (63.60%), Query Frame = 0
Query:    5 HLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTA---KDG--GLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGVGPAA-MGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQ 248
             ++LDP+IRDWVV P++++     ++RH +T LLK+EK    DE+    T+ RA+  R N +FI+ +AFA RK Y+TA   K G  G LR        N M NP  M+  MK  M F+++N  MM   SYFF GFVL +VPF LT +FK MLQRG+ L+TLD SYVSS SWYFLVMFG+R  +++ L + +A D++K +Q Q+G+G    +GFD  KV+  E  SL L  H   L+  EK+LLG   PK+
Sbjct:    3 EIILDPSIRDWVVLPMVIIFGCSAMVRHYVTLLLKTEKIATVDEMRPMNTVKRAQMTRINSKFITNDAFAMRKHYYTASQKKHGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKSMLQRGIELNTLDVSYVSSVSWYFLVMFGMRGFLSLILGEQSASDDSKAMQMQMGMGAGPNVGFDAPKVYKQERVSLRLHSHEWFLEHAEKKLLGEPIPKK 252          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: W7TI20_9STRA (ER membrane protein complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI20_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.360e-61
Identity = 121/254 (47.64%), Postives = 159/254 (62.60%), Query Frame = 0
Query:    2 GGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDG--GLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMF-LRDAAAQDEAKVIQSQ-----LGVGPAA-MGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYP 246
                L+LDPAIR+W V P+++ V+ + +LR  +T L K  KP + D+L  +Q L RA RLR NG  I +  F +RK +F  KD   G L  + +PG  NPM+NP  MM  +K Q  F +T M MM F+  FF GFVLV++PF LT  FK MLQRG+ LSTLDASYVS+TSW FLV FG++    +F   D   ++EA+V   Q     LG GP A MGFD  K++++    LD+  H   L+DVEKRLLG +YP
Sbjct:    9 SSRDLLLDPAIRNWGVLPILVFVLCINLLRAYLTHLGKGNKPPEIDDLRRRQVLARADRLRANGNNIHKAGFEARKAWFVGKDEQEGALSEEGVPGAVNPMSNPMGMMEMVKGQAYFGMTQMGMMQFSEMFFAGFVLVKIPFALTASFKGMLQRGIELSTLDASYVSATSWMFLVAFGVKDLQRLFSFDDGPMKEEARVYALQAGGVPLGGGPPAPMGFDCAKMYSAAKGGLDMTRHRFALEDVEKRLLGDRYP 262          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A484E2Y6_BRELC (ER membrane protein complex subunit 3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2Y6_BRELC)

HSP 1 Score: 203 bits (517), Expect = 8.340e-61
Identity = 117/248 (47.18%), Postives = 156/248 (62.90%), Query Frame = 0
Query:    5 HLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTA---KDG--GLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGVGPAA-MGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYP 246
             ++LDP+IRDWVV P++++     ++RH +T LLK+EK    ++L    T+ RA+  R N +FI+ +AFA RK YFTA   KDG  G LR        N M NP  M+  MK  M F+++N  MM   SYFF GFVL +VPF LT +FK MLQRG+ L+TLD SYVSS SWYFLV FG+R  +++ L +A+A D+AK +Q Q+G+G    M FD  K +  E  SL L  H   L+  EK+LLG   P
Sbjct:    3 EIILDPSIRDWVVLPMIIIFGCSAMVRHYVTLLLKTEKMATVEQLLPLNTVKRAQITRINSKFIASDAFAMRKHYFTASQKKDGMKGALREKVKSEAMNQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVLAKVPFSLTQKFKTMLQRGIELNTLDVSYVSSVSWYFLVSFGMRGFLSLILGEASASDDAKAMQLQMGMGAGPNMAFDAPKAYKQERVSLRLQNHDWALEFAEKKLLGEPIP 250          
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Match: A0A8K1CD93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD93_PYTOL)

HSP 1 Score: 202 bits (515), Expect = 1.770e-60
Identity = 118/250 (47.20%), Postives = 155/250 (62.00%), Query Frame = 0
Query:    5 HLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELSYKQTLTRAKRLRGNGRFISEEAFASRKGYFTA---KDG--GLLRRDDLPGQENPMANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVMLQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQSQLGVGPAA-MGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQ 248
             ++LDP+IRDWVV P++L++     LRH IT LLK+EK    DEL    T+ RA   R N +F+S +AFA R+ YFTA   K G  G LR        + M NP  M+  MK  M F+++N  MM   SYFF GFV+ +VPF LT +FK+MLQRG+ L+TLD SYVSS SWYFLVMFG+   + + L +  A D+ K +Q Q+G+G    +GFD  K++  E  SL L  H   L+  EKRLLG   PK+
Sbjct:    3 EIILDPSIRDWVVLPMVLIIGCSASLRHYITLLLKTEKIAAIDELRPMNTVRRAAVTRMNSKFVSADAFAMRRHYFTASQKKHGMRGALREKVKNEAMHQMMNPNSMLEMMKGNMTFMVSNFVMMGLMSYFFGGFVIAKVPFSLTQKFKLMLQRGIDLTTLDVSYVSSISWYFLVMFGMSGFLQLILGEKTANDDTKAMQMQMGMGAGPNVGFDAPKMYKQERVSLRLHQHEWALEHAEKRLLGDPIPKK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12799.2066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3G7_ECTSI2.260e-15985.19ER membrane protein complex subunit 3 n=2 Tax=Ecto... [more]
A0A835YX73_9STRA6.690e-7548.70ER membrane protein complex subunit 3 n=1 Tax=Trib... [more]
A0A7S3NPS9_9STRA1.440e-7051.84ER membrane protein complex subunit 3 n=1 Tax=Aure... [more]
A0A7S1U0N1_9STRA5.770e-6749.23ER membrane protein complex subunit 3 n=1 Tax=Phae... [more]
A0A7S2SE12_9STRA3.820e-6548.35ER membrane protein complex subunit 3 n=1 Tax=laby... [more]
A0A7S3M269_9STRA2.070e-6442.97ER membrane protein complex subunit 3 n=2 Tax=Spum... [more]
K3WAK6_GLOUD5.890e-6246.80ER membrane protein complex subunit 3 n=2 Tax=Pyth... [more]
W7TI20_9STRA4.360e-6147.64ER membrane protein complex subunit 3 n=2 Tax=Mono... [more]
A0A484E2Y6_BRELC8.340e-6147.18ER membrane protein complex subunit 3 n=1 Tax=Brem... [more]
A0A8K1CD93_PYTOL1.770e-6047.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 5..190
e-value: 3.3E-62
score: 222.7
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 6..189
e-value: 1.2E-45
score: 155.3
IPR008568ER membrane protein complex subunit 3PIRSFPIRSF010045TMP_111coord: 1..245
e-value: 2.9E-74
score: 247.9
IPR008568ER membrane protein complex subunit 3PANTHERPTHR13116UNCHARACTERIZEDcoord: 4..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..186
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
NoneNo IPR availableTMHMMTMhelixcoord: 156..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12799contigH-elongata_contig12799:1242..7144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12799.2066.1mRNA_H-elongata_contig12799.2066.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12799 1242..7144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12799.2066.1 ID=prot_H-elongata_contig12799.2066.1|Name=mRNA_H-elongata_contig12799.2066.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=293bp
MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKSEKPLDKDELS
YKQTLTRAKRLRGNGRFISEEAFASRKGYFTAKDGGLLRRDDLPGQENPM
ANPEKMMGPMKSQMGFVITNMFMMTFTSYFFEGFVLVRVPFPLTNRFKVM
LQRGVLLSTLDASYVSSTSWYFLVMFGLRAAINMFLRDAAAQDEAKVIQS
QLGVGPAAMGFDTKKVFASEADSLDLAPHSCVLDDVEKRLLGSKYPKQSV
FDLVGMHDGNAAIFGANSDGGGRRGGAGGNSKGSGGSNSKTSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008568EMC3