mRNA_H-elongata_contig127906.2057.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: D8LS26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS26_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 8.580e-17 Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 1
Query: 1 NKLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
NK AL DAERC+EVNPSWAKGYSR+GT LFR+G+H +AA AYSKG
Sbjct: 120 NKATEALMDAERCVEVNPSWAKGYSRMGTALFRLGRHDKAAAAYSKG 166
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A7S3TWU9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TWU9_9SPIT) HSP 1 Score: 62.4 bits (150), Expect = 3.990e-10 Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 KLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
+ D+AL DAE CI + PSWAKGYSR G LFR+ K A A DA+ KG
Sbjct: 546 QYDKALADAEDCIRLQPSWAKGYSRKGAALFRMDKLAGARDAFEKG 591
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A7S4BUN9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BUN9_CHRCT) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-9 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 KLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
+ D+AL DAE CI + P+WAKGYSR G LFR+ K A A DA+ KG
Sbjct: 545 QYDKALADAEDCIRLQPTWAKGYSRKGAALFRMDKLAGARDAFEKG 590
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A7S0JB72_9EUKA (Hypothetical protein n=2 Tax=Coccolithales TaxID=418917 RepID=A0A7S0JB72_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-9 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 KLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
+ D+AL DAE CI + P+WAKGYSR G LFR+ K A A DA+ KG
Sbjct: 571 QYDKALADAEDCIRLQPTWAKGYSRKGAALFRMDKLAGARDAFEKG 616
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A512UN21_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UN21_9ASCO) HSP 1 Score: 60.5 bits (145), Expect = 1.910e-9 Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 7 LDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSK 138
D+ALQDA++C E+NPSWAKGYSR+G + +G A +AY+K
Sbjct: 54 FDKALQDAQKCTEINPSWAKGYSRVGAAQYGLGNLDDAKNAYTK 97
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A7S3W520_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W520_EMIHU) HSP 1 Score: 60.5 bits (145), Expect = 1.910e-9 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 KLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
+ D+AL DAE CI + P+WAKGYSR G LFR+ K A A DA+ +G
Sbjct: 546 QYDKALADAEECIRLQPTWAKGYSRKGAALFRMDKLAGARDAFEQG 591
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A830HEN7_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HEN7_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 16 ALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
AL DAE C+ +NP+W KGYSRLG L + K A+A DAYSKG
Sbjct: 55 ALADAETCVSINPTWPKGYSRLGAALQGMRKFAEAKDAYSKG 96
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A2A9M6Z3_9APIC (Tetratricopeptide repeat domain containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M6Z3_9APIC) HSP 1 Score: 59.7 bits (143), Expect = 3.560e-9 Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 NKLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
NKL+ ALQDAE C+++ P+W KGYSR G FR+ K+ +A Y KG
Sbjct: 55 NKLEEALQDAEVCVKLRPTWGKGYSRKGLAEFRMMKYKEAEATYQKG 101
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A7R9YQT0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQT0_9CHLO) HSP 1 Score: 59.3 bits (142), Expect = 4.870e-9 Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 10 DRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
D ALQDAE+C+E+NP WAKGYSRLG L+ + A AY G
Sbjct: 53 DGALQDAEKCVELNPGWAKGYSRLGAALYGLESWGDAIKAYEAG 96
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Match: A0A6P8I070_ACTTE (Stress-induced-phosphoprotein 1 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I070_ACTTE) HSP 1 Score: 58.9 bits (141), Expect = 6.660e-9 Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 4 KLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKG 141
K ++AL+DA++C+E+ P WAKGYSRLGT LF + ++ A A+ G
Sbjct: 55 KYEQALEDAKKCVEIKPEWAKGYSRLGTALFFLKQYEAAEKAFEAG 100 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127906.2057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127906.2057.1 >prot_H-elongata_contig127906.2057.1 ID=prot_H-elongata_contig127906.2057.1|Name=mRNA_H-elongata_contig127906.2057.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp NKLDRALQDAERCIEVNPSWAKGYSRLGTTLFRIGKHAQAADAYSKGback to top mRNA from alignment at H-elongata_contig127906:1563..1703- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127906.2057.1 ID=mRNA_H-elongata_contig127906.2057.1|Name=mRNA_H-elongata_contig127906.2057.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=141bp|location=Sequence derived from alignment at H-elongata_contig127906:1563..1703- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127906:1563..1703- >mRNA_H-elongata_contig127906.2057.1 ID=mRNA_H-elongata_contig127906.2057.1|Name=mRNA_H-elongata_contig127906.2057.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=282bp|location=Sequence derived from alignment at H-elongata_contig127906:1563..1703- (Himanthalia elongata Himel1 dioecious)back to top |