mRNA_H-elongata_contig127834.2049.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A6H5L844_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L844_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.000e-32 Identity = 56/74 (75.68%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQVFI 222
+ V V +D+FL+L CDG+WD++SSQQ VSY+HRRLLKHRDVQRASRELCKTLGKM GSDNCSCV+VCLNQV +
Sbjct: 1142 RSVVVHPDDEFLVLACDGVWDLVSSQQVVSYVHRRLLKHRDVQRASRELCKTLGKMSGSDNCSCVIVCLNQVSV 1215
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: D8LIK7_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK7_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.570e-29 Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQVFI 222
Q +S FLIL DG+WD++SSQQ VSY+HRRLLKHRDVQRASRELCKTLGKM GSDNCSCV+VCLNQV +
Sbjct: 2190 QLISKPETRSFLILAWDGVWDLVSSQQVVSYVHRRLLKHRDVQRASRELCKTLGKMSGSDNCSCVIVCLNQVSV 2263
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A835Z7B9_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.720e-23 Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 4 QVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
+V V +D FLIL CDG+WDV++SQQAV ++ RR+L H DVQRASREL + + +DNCSC+VVCLNQ+
Sbjct: 39 KVEVLPQDSFLILACDGIWDVMTSQQAVDFVQRRMLSHCDVQRASRELARKAVDLYSNDNCSCIVVCLNQL 109
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A834X481_9FABA (Protein-serine/threonine phosphatase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X481_9FABA) HSP 1 Score: 79.7 bits (195), Expect = 9.110e-16 Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
+QV++ +D+FLI+GCDG+WDVISSQ AVS++ R L +H D Q +REL K ++ SDN + +V+CL+ +
Sbjct: 296 KQVALTEDDEFLIIGCDGIWDVISSQDAVSFVRRGLRRHDDPQLCARELVKEALRLNTSDNLTVIVICLSSI 367
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: I1L0M5_SOYBN (Protein-serine/threonine phosphatase n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1L0M5_SOYBN) HSP 1 Score: 79.7 bits (195), Expect = 9.180e-16 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
Q V++ +D+FLI+GCDG+WDVISSQ AVS++ R L +H D Q+ +REL K ++ SDN + +V+CL+ V
Sbjct: 300 QVVTLTEDDEFLIIGCDGIWDVISSQDAVSFVRRGLRRHDDPQQCARELVKEALRLHTSDNLTVIVICLSPV 371
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A1J7H0Y6_LUPAN (Protein-serine/threonine phosphatase n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7H0Y6_LUPAN) HSP 1 Score: 79.3 bits (194), Expect = 1.180e-15 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
Q V++ ED+FLI+GCDG+WDV+SSQ AVS RRL +H D Q+ +REL K ++ SDN + +V+CL+ V
Sbjct: 291 QLVTLTEEDEFLIIGCDGIWDVMSSQYAVSLARRRLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSSV 362
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A2P6QZD6_ROSCH (Protein-serine/threonine phosphatase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QZD6_ROSCH) HSP 1 Score: 78.6 bits (192), Expect = 1.880e-15 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQ 213
Q+V + +D+FLIL CDG+WDV+SSQ AVS + R L KH D Q+ +REL K +M +DN + +VVCL+
Sbjct: 255 QRVKLTEDDEFLILSCDGIWDVMSSQYAVSLVRRELRKHNDPQQCARELVKEALRMHAADNLTVIVVCLSS 325
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A0A9IEJ2_ARUDO (Protein-serine/threonine phosphatase n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9IEJ2_ARUDO) HSP 1 Score: 75.9 bits (185), Expect = 3.070e-15 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLN 210
++V + ED+FLI+GCDGLWDV+SSQ AVS + + L+KH D QR SREL + + DN + VVVC +
Sbjct: 98 REVRLTEEDEFLIIGCDGLWDVMSSQCAVSMVRKELMKHNDPQRCSRELVQEALRRDCCDNLTVVVVCFS 167
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: UPI0010A5336B (probable protein phosphatase 2C 13 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5336B) HSP 1 Score: 78.2 bits (191), Expect = 3.360e-15 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 4 QVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
QVS+ +D+FLI+GCDG+WDV+SSQ AVS++ R L +H D Q+ +R+L K + SDN + +V+CL+ V
Sbjct: 297 QVSLTEDDEFLIIGCDGIWDVMSSQYAVSFVRRGLRRHDDPQQCARDLVKEALHLRTSDNLTVIVICLSSV 367
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Match: A0A444ZEF9_ARAHY (PPM-type phosphatase domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444ZEF9_ARAHY) HSP 1 Score: 76.3 bits (186), Expect = 4.020e-15 Identity = 31/72 (43.06%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 1 QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCKTLGKMPGSDNCSCVVVCLNQV 216
Q V++ +D+FLI+GCDG+WDV+SSQ+ V ++HR+L++H D Q+ ++EL K ++ +DN + + +CL+ V
Sbjct: 134 QVVTLTEKDEFLIIGCDGIWDVMSSQEVVRFVHRQLIRHDDPQQCTKELVKEALRLNTTDNLTVIGICLSPV 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127834.2049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127834.2049.1 >prot_H-elongata_contig127834.2049.1 ID=prot_H-elongata_contig127834.2049.1|Name=mRNA_H-elongata_contig127834.2049.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp QQVSVQAEDDFLILGCDGLWDVISSQQAVSYIHRRLLKHRDVQRASRELCback to top mRNA from alignment at H-elongata_contig127834:670..1414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127834.2049.1 ID=mRNA_H-elongata_contig127834.2049.1|Name=mRNA_H-elongata_contig127834.2049.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=745bp|location=Sequence derived from alignment at H-elongata_contig127834:670..1414- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127834:670..1414- >mRNA_H-elongata_contig127834.2049.1 ID=mRNA_H-elongata_contig127834.2049.1|Name=mRNA_H-elongata_contig127834.2049.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=462bp|location=Sequence derived from alignment at H-elongata_contig127834:670..1414- (Himanthalia elongata Himel1 dioecious)back to top |