prot_H-elongata_contig1274.2030.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1274.2030.1
Unique Nameprot_H-elongata_contig1274.2030.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length518
Homology
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: D7FVD9_ECTSI (Similar to Serine/threonine-protein kinase Sgk3 (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) isoform 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD9_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.010e-83
Identity = 149/196 (76.02%), Postives = 162/196 (82.65%), Query Frame = 0
Query:  188 ELVVSVPSYQEHLTSDGQRYTTYEIVVRMGGRQWSVRRRYSQFDQFRHSLRKQHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHPRPQEVDVFLAMDEHGAGVSARAGSRPIAWTTGNASPVSTTPTDPALGGSTWSGAGGAAAVLRLPSGPGVGPPAKGVTEHRKRIPRFPPLADQGRAEKAAVA 383
            EL +SVPS+QEHLT+DGQRYTTYE++VRMGGRQWSVR+RYSQFDQFR SLRKQHKEVGSFRFP+KSKFNTFAEHTKERRRTGFDEFLRLVA LHPRP+EVDVFLAMDEHGAGV  R GSRP+AWT+   SP++  P  PALG   WSG+G      RL SG GV    KG T HR  IPRFPPLADQGR EKAA A
Sbjct:  116 ELELSVPSHQEHLTADGQRYTTYEVMVRMGGRQWSVRKRYSQFDQFRMSLRKQHKEVGSFRFPHKSKFNTFAEHTKERRRTGFDEFLRLVANLHPRPEEVDVFLAMDEHGAGVRGRPGSRPLAWTSTKTSPLNPPP-GPALG-RVWSGSGRTNGGRRLASGSGVVRNPKGGTAHR--IPRFPPLADQGRNEKAAEA 307          
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: A0A7S0XGX7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XGX7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.580e-18
Identity = 49/110 (44.55%), Postives = 75/110 (68.18%), Query Frame = 0
Query:  189 LVVSVPSYQEHLTSDGQRYTTYEIVVRM--GGRQWSVRRRYSQFDQFRHSLRKQHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHPRPQEVDVFLAMDEH 296
            L+VSVPS++E + S GQ  T Y + +       ++S+ +RYS+F Q ++ L++++ E+ SF+FPNKS FNT A  TKERRR GFD+FL+++    P P E + FL ++EH
Sbjct:    1 LLVSVPSFEEQIDSHGQPVTYYVVHIESTTSNLRYSLMKRYSKFAQLKNLLKEKYPEMESFKFPNKSVFNTQAYFTKERRRQGFDDFLKMLCKTIPMPIEFEEFLELNEH 110          
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: A0A836CA34_9STRA (PX domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA34_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.490e-14
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:  225 RRYSQFDQFRHSLRKQHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHPRPQEVDVFL 291
            RRYS F+  R ++R  H+ V  F FP+KSKFNTFA+ TKERRRTGF++F+ L+ G   RP EVD FL
Sbjct:    1 RRYSDFEALRDAVRSVHRCVSDFDFPHKSKFNTFADWTKERRRTGFEDFMMLLLGFTTRPAEVDAFL 67          
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: A0A7S2CPX7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPX7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 8.430e-7
Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 0
Query:  191 VSVPSYQEHLTSDGQRYTTYEIVVRMG-GRQWSVRRRYSQFDQFRHSLRKQHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHPRPQEV 287
            ++VP + E    DG R+T Y    +   G  W++ +RY+        L   + ++  +RFP KS FNTFAE T+ERRR+GF++++ L+  ++ R +EV
Sbjct:   15 ITVPKWIEIEKEDGTRHTIYIFKAQAADGTTWTLEKRYTDVFDMHIRLFDTNPQISGYRFPKKSVFNTFAEFTRERRRSGFEDYMGLLLTMN-RVREV 111          
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: A0A2T9YP72_9FUNG (PX domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YP72_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 3.910e-5
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 0
Query:  187 DELVVSVPSYQEHLTSDGQ-RYTTYEIVVRMG-----GRQWSVRRRYSQFDQFRHSLRKQHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHP 282
            + L + V + Q H   DG+ +YT YEI+ R        +  SVRRRYS+F+ FR +L+++   V     P K   N F++   E RR G + FL++VAG HP
Sbjct:   30 NSLEIEVVNPQTH--DDGKNKYTDYEIICRTNIPSFKFKNSSVRRRYSEFEWFRETLKREVAGVNIPNLPGKVLTNRFSDKVIEERREGLENFLQVVAG-HP 128          
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Match: A0A7S3NQA4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NQA4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.860e-5
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 0
Query:  191 VSVPSYQEHLTSDGQRYTTYEI-VVRMGGRQWSVRRRYSQFDQFRHSLRK--QHKEVGSFRFPNKSKFNTFAEHTKERRRTGFDEFLRLVAGLHP 282
            V VP Y + +   GQ  T Y I V+   G    + +RYS   +F   + K   H  +  F FP+KS FNT AE TKERRR+GF+E+  L+  L P
Sbjct:   15 VRVPKYVD-VDVGGQILTLYPIEVMYEDGNMRKLSKRYSDVLRFHKEVLKGASHPALEGFNFPHKSMFNTSAEFTKERRRSGFEEYFELLLRLGP 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1274.2030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FVD9_ECTSI1.010e-8376.02Similar to Serine/threonine-protein kinase Sgk3 (S... [more]
A0A7S0XGX7_9STRA1.580e-1844.55Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A836CA34_9STRA1.490e-1458.21PX domain-containing protein (Fragment) n=1 Tax=Tr... [more]
A0A7S2CPX7_9STRA8.430e-735.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2T9YP72_9FUNG3.910e-538.24PX domain-containing protein n=1 Tax=Smittium simu... [more]
A0A7S3NQA4_9STRA4.860e-541.05Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 183..294
e-value: 9.6E-5
score: 31.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 192..279
e-value: 4.6E-12
score: 45.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 188..300
score: 11.441
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 185..293
e-value: 6.3E-22
score: 79.4
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 189..282
NoneNo IPR availablePANTHERPTHR47194FAMILY NOT NAMEDcoord: 192..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 413..436
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 462..517
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 437..441
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..461
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..412
NoneNo IPR availableTMHMMTMhelixcoord: 443..462
NoneNo IPR availableTMHMMTMhelixcoord: 414..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1274contigH-elongata_contig1274:5548..15861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1274.2030.1mRNA_H-elongata_contig1274.2030.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1274 5436..16863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1274.2030.1 ID=prot_H-elongata_contig1274.2030.1|Name=mRNA_H-elongata_contig1274.2030.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=518bp
MSDSQVELENYAANTSPLQGNARNDSAAPAVDAEDSLSSTAATRISAEQP
RSASFTELTREPSKYLSRVRSPRSAVALLQPPEAEGARSDLSAVVRDALR
RPQERQGNQASVTGGSATPSLDSSTRNRNRSPNSLSPSRPPRAGSSTGVD
GLEGSSASSNLSPEMTRPSVATGIGIRERNVEPSVPDELVVSVPSYQEHL
TSDGQRYTTYEIVVRMGGRQWSVRRRYSQFDQFRHSLRKQHKEVGSFRFP
NKSKFNTFAEHTKERRRTGFDEFLRLVAGLHPRPQEVDVFLAMDEHGAGV
SARAGSRPIAWTTGNASPVSTTPTDPALGGSTWSGAGGAAAVLRLPSGPG
VGPPAKGVTEHRKRIPRFPPLADQGRAEKAAVAAAEAEAVAEAASRYGSS
NVIRQLDLMFKRLFGVDVMNVLAVVAVSTATIVSVWKVGGRPGIVTLVIS
VFIGLFAQSWAAGQKLLSKGLELVGVSAGSSLPPSPTQTKERVEPCSSSV
CLRLPSNPAGEDQVLRL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf