mRNA_H-elongata_contig102321.203.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig102321.203.1
Unique NamemRNA_H-elongata_contig102321.203.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: D8LM14_ECTSI (Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 5.190e-167
Identity = 257/319 (80.56%), Postives = 278/319 (87.15%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQEFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMATAGDPLQASWP 957
            YLGLEPYD+YW RVRDMY+PFE+GMKSGTARVFDHQIP GGQYSNLMVQCKSMGIW+KWE VLDMYRDVN LFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPA+KGQVDFPDSVV LLEGRLGFPH+GFP+EVSKA+LG+KKPLTTRPSAALPPADFAAVK+ L EGKCG+VLGEVTDELV+S LLYPK        VFDDYV+ MDKSSTLLTSLPTPVFWYGLVVGQEFS+   +PA LL  GD        G    K++LERVGPAKKGGMRTVSFTV GAVQNVE+KDSV+GNDFDGPMA AG+ L+   P
Sbjct:  867 YLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIP-GGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEVSKAVLGDKKPLTTRPSAALPPADFAAVKAKLREGKCGQVLGEVTDELVVSSLLYPK--------VFDDYVNEMDKSSTLLTSLPTPVFWYGLVVGQEFSICPANPADLLKDGDDG-----DGATEVKIRLERVGPAKKGGMRTVSFTVGGAVQNVEIKDSVSGNDFDGPMAGAGNALEVGSP 1171          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A7S3NKJ5_9STRA (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA)

HSP 1 Score: 316 bits (810), Expect = 2.640e-95
Identity = 166/313 (53.04%), Postives = 213/313 (68.05%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQEFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMATAGDP 939
            YL LEP D+YW +VR+MYAPFE GM SG+ARV+DH+IP GGQY+NL VQCKSMG+ ++WE VLD YRDVNQLFGDIVKVTPSSKCVGDLAL+L+ + LKA D+ DP +   +D+PDSVV L EGRLGFPHRGFP+EV+ AIL  K  LT RPS+ALPPADF   +  L++    K   ++ DE V++ LLYPK        VFDDY++    ++     LPTP+FWY   +GQ  ++    P+++  K   +  +         + L+RVGP K G MRT+ F V    Q+VEVK+  A  +FDGPMA   +P
Sbjct:  896 YLALEPLDVYWMKVREMYAPFETGMLSGSARVYDHEIP-GGQYANLFVQCKSMGLGDRWEEVLDAYRDVNQLFGDIVKVTPSSKCVGDLALFLINKNLKAFDILDPEKTKNIDYPDSVVGLFEGRLGFPHRGFPDEVTSAILQGKPKLTIRPSSALPPADFTKTQIELSD----KYGVQLDDERVMAALLYPK--------VFDDYMNFCATNTAAAAFLPTPIFWYSFSIGQTATISKL-PSEIAQKELGSTLESEE----ITLTLKRVGPLKAGRMRTIVFQVNDKEQHVEVKNPAAEGEFDGPMADTSNP 1190          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: F0XWB2_AURAN (Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB2_AURAN)

HSP 1 Score: 311 bits (798), Expect = 1.510e-93
Identity = 177/322 (54.97%), Postives = 221/322 (68.63%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQEF---SMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMATAGDPLQASWP 957
            Y+ LEPYD+YW +VR MYAPFE GM +G+ARVFDH+IP GGQY+NL VQC+SMG+ ++WE VLD YRDVN+LFGD+VKVTPSSKCVGDLALYLVTR + A+DV D ++   +D+PDSVV L+EGRLGFPHRGFP +V +AILG++KPLTTRPSAALPPADF A  + L     G+ L     E  ++ +LYPK        VFDD++      + +   LPTPV+ +GL VGQ     S+PA   A+L    DA  A  +       + L+RVGP K G MRT+ F V GA Q VEVK+     +FDGPMA AGD    + P
Sbjct:  914 YMRLEPYDVYWAKVRAMYAPFETGMLAGSARVFDHEIP-GGQYANLFVQCQSMGLADRWEEVLDAYRDVNKLFGDVVKVTPSSKCVGDLALYLVTRKMTAADVLDGSKT--LDYPDSVVGLMEGRLGFPHRGFPADVQQAILGDRKPLTTRPSAALPPADFGAEAARLAAAH-GRPLDA---ERTMASVLYPK--------VFDDFMRFCVDETCVSVYLPTPVYLHGLAVGQTARLASLPAPL-AKLECGVDAVDAVVD-----VDVTLKRVGPLKAGRMRTLVFDVNGAEQRVEVKNPAPEGEFDGPMADAGDAAHVAAP 1214          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A7S3Y4I5_HETAK (Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK)

HSP 1 Score: 298 bits (763), Expect = 1.740e-88
Identity = 160/310 (51.61%), Postives = 205/310 (66.13%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQ--EFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMA 924
            YL LEPYD YW ++R+MY+PFE GM SGTARV+DH+IP GGQYSNL  QCKSMG+W++WE VLDMYRDVN+LFG +VKVTPSSKCVGDLALYL+ RGL A DV  P    ++D+P SVV L+EG+LGFPHRGFP  V  A+L  K  LT RP A + PAD    K+ L E + G  +     E  ++ L+Y K        VF DY+  ++K S  +T+L TPVFWYG+ +G   EFS+PA+   ++    +  V +   G    KM L+RV   +KG +RTV F V G  Q+V + D    ++F GPMA
Sbjct:  966 YLTLEPYDQYWAKIREMYSPFESGMLSGTARVYDHEIP-GGQYSNLFAQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLINRGLSAEDVLKPEIADKIDWPSSVVDLMEGKLGFPHRGFPSAVQDAVLKGKPQLTVRPGAVMDPADLVGKKTALEE-QYGTTMHR---EDTVTSLMYSK--------VFSDYMDFINKYSPYITNLETPVFWYGMEIGDVTEFSIPASAAEEM----NIPVFETIDGMVPVKMTLKRVTGLQKGYVRTVIFDVNGREQHVNIVDKPESDEFSGPMA 1258          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A7S4DC20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK)

HSP 1 Score: 285 bits (728), Expect = 1.640e-87
Identity = 164/318 (51.57%), Postives = 200/318 (62.89%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQEFSMPATDPAQLLLKGDAAVAQKNGGPPGY-------KMKLERVGPAKKG-GMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMATA 930
            Y+ LEPYDMYW  VRDMY PFE GM S TARV+DH+IP GGQYSNL+VQCKSMG+W++WE VLDMYRDVN+LFG +VKVTPSSKCVGDLALYLVTR L  +DV DPA+  ++DFP S   L+EG+LG PHRGFP  +   +L     L  RP AA+ PAD AA ++ L E K     G  +DE V++ L+YPK        VF DY     K ST+ T+L TPVFWYG+ VG        D  +L +    A   +   P  Y       K+ L+RV P     G RTV F V G  Q+V ++   A + F GPMA A
Sbjct:  297 YMKLEPYDMYWGGVRDMYKPFESGMLSSTARVYDHEIP-GGQYSNLIVQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLVTRNLTTADVLDPAKAAKIDFPASTKDLMEGKLGRPHRGFPARLEAVVLKGAPKLAGRPGAAMAPADLAAQRADL-EAK----YGGASDEDVVTSLMYPK--------VFADYKEFTQKYSTVTTNLETPVFWYGMDVG--------DVTELTVSRAKAEEMRVPIPEDYMGDEVLVKVTLKRVTPITGDKGARTVIFDVNGVEQHVTIETHKADDTFSGPMADA 592          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A6H5JLQ2_9PHAE (Pyruvate carboxyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ2_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.100e-81
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPA-------------GGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEV 411
            YLGLEPYD+YW RVRDMY+PFE+GMKSGTARVFDHQIP              GGQYSNLMVQCKSMGIW+KWE VLDMYRDVN LFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPA+KGQVDFPDSVV LLEGRLGFPH+GFP+EV
Sbjct:  176 YLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKIGEIHISCSRAKGGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 325          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A0G4GPU4_9ALVE (Lipoyl-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GPU4_9ALVE)

HSP 1 Score: 256 bits (653), Expect = 3.400e-79
Identity = 155/323 (47.99%), Postives = 199/323 (61.61%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIW-NKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQEFSMPATDPAQLLLKG--DAAVAQKNGGPPG---YKMKLERVGPAKKGGMRTV-----SFTVAGAV----QNVEVKDSVAGNDFDGPMA 924
            ++ L PY+  W R+R +Y+ FE GM SGTARV+DHQIP GGQYSNL+VQC S+G++ +KWE+VLD YRDVN LFGDI+KVTPSSKCVGDLAL+LV RGL   D+ DP +   VDFP+SVV L +G LGFPHRGFP E+ K +L  +K  T R    LPP D      +L+E    K   EV++E  +S L+YPK        VF DY+        +LT +P+  ++YG+  G+ FS  A  P  LL +   D + A +  GP       + L RVGP +K   RTV     S T AGA     Q+V VKD+     +DGPMA
Sbjct:   19 FMDLAPYEELWARIRSVYSVFESGMLSGTARVYDHQIP-GGQYSNLLVQCNSLGMYGDKWETVLDTYRDVNMLFGDIIKVTPSSKCVGDLALFLVNRGLTCEDLKDPVKGAAVDFPESVVGLFKGDLGFPHRGFPSEIEKIVLRGQKKRTGRAGVQLPPVDMKGNIKSLSE----KFGIEVSEEEAMSSLMYPK--------VFADYIKKQMSGRRMLTHVPSAEYFYGMAPGEHFSFSA--PVSLLKEVFVDPSKASEGMGPEESVEVTVSLVRVGPLQKS-HRTVEIKLTSKTKAGATVTEKQSVSVKDTAGVFHYDGPMA 325          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A7S2AEU2_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AEU2_9DINO)

HSP 1 Score: 241 bits (616), Expect = 4.180e-73
Identity = 140/321 (43.61%), Postives = 189/321 (58.88%), Query Frame = 1
Query:    1 YLGLEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAIL-GEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQ--EFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGND-FDGPMATAGDPLQAS 951
            Y  LE  D YW  VRDMY+ FE GMK+ TARVFDHQIP GGQYSN+  QC+++G    W+SVL MYRDVN   GD+VKVTPSSK VGD+AL+L+ +G+   D TD  +   +++P S + L  G +GFPHRGFP E+  AIL G+ KPL  RP   L P DFA +K  + E    +   + TD  + ++L+YP         VF  Y+  +DK+  L T LP+P F+YGL VG+  EF +P    A+     D + A          ++L RVGP +   MR+V + + G    V++KD+  G   +DGPMA   +    S
Sbjct:   84 YKELELLDQYWAFVRDMYSIFESGMKAMTARVFDHQIP-GGQYSNMYAQCRALGDAENWDSVLKMYRDVNDWCGDVVKVTPSSKSVGDIALFLLKQGITKEDFTDMKKMQALNWPQSAIELARGEMGFPHRGFPVEMQDAILKGQLKPLEGRPGDTLAPEDFAQIKKEMEE----EFKRQPTDYDMNAFLMYPA--------VFRGYIKHIDKAGPLTTHLPSPAFFYGLDVGEKIEFEIPGASVAEAEANFDESAASST-----VSLELARVGPLEHDDMRSVEWKMNGTSYVVKMKDTPTGKKKYDGPMADPSNKTHVS 386          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A812Y569_SYMPI (Pyc protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y569_SYMPI)

HSP 1 Score: 222 bits (565), Expect = 1.430e-61
Identity = 134/319 (42.01%), Postives = 181/319 (56.74%), Query Frame = 1
Query:   10 LEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAIL-GEKKPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQ--EFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMATAGDPLQASWP 957
            LE  D YW  VRDMY+PFE GMK+ TARVF HQ+P GGQYSN+  QC S+G  N W+ VL MY DVN   GDIVKVTPSSK VGD+AL+LV +G++ SD  +  +   + +P S + L  G +G PH GFP+ ++ AIL G+ KP+  RP   L P DF  VK+ + E    + + E T E + ++L+YP         VF DY   + K+  L T LPT  F+YGL V +  +F +P  +      K DA++ +         ++L RVGP +   MRT  + V G    V +KD      + GPMA   +    S P
Sbjct:  897 LEGLDAYWASVRDMYSPFESGMKAMTARVFQHQVP-GGQYSNMYAQCHSLGGEN-WDKVLQMYADVNMWCGDIVKVTPSSKAVGDIALFLVKQGIEPSDFDNIPKMQSLHWPQSAIELARGEMGVPHFGFPQRMTAAILKGQLKPMEGRPGDTLAPEDFEKVKAQMKE----EFVMEPTSEDLNAFLMYPG--------VFRDYKKHLAKAGPLATYLPTAAFFYGLNVNETIDFDVPGANVMDAEAKNDASLPRSKA-----SIQLTRVGPLEHD-MRTCEWLVDGTTYQVSIKDPPKNASYAGPMADPSNKTHVSCP 1195          
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Match: A0A812V7Y3_9DINO (Acetyl-CoA carboxytransferase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V7Y3_9DINO)

HSP 1 Score: 219 bits (557), Expect = 1.700e-60
Identity = 131/321 (40.81%), Postives = 183/321 (57.01%), Query Frame = 1
Query:   10 LEPYDMYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNKWESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQKGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEK--KPLTTRPSAALPPADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVSIMDKSSTLLTSLPTPVFWYGLVVGQ--EFSMPATDPAQLLLKGDAAVAQKNGGPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGN-DFDGPMATAGDPLQASWP 957
            LE  D YW +VRDMY+PFE GMK+ TARVF+HQ+P GGQYSN+  QC+ +G    W+ VL MY DVN+  GDIVKVTPSSK VGD+AL+L+ +G++ SD  +  +   + +P S + L  G +G PH GFP+ +  AIL  +  KPL  RP   L   DFA V++ + + + G    E + E + ++L+YP         VF DY+  + K   L T LPTP F+YGL V +  EF +P     +   + +AA+ +         +KL RVGP +   MRT  + V G    V +KD   G   + GPMA   +    + P
Sbjct:  899 LEGLDSYWAKVRDMYSPFESGMKAMTARVFEHQVP-GGQYSNMYAQCRELGNAENWDQVLQMYADVNKWCGDIVKVTPSSKSVGDIALFLLKQGIQVSDFDNLPKMQALQWPQSAIELARGEMGTPHFGFPKRMQDAILTGRQLKPLEGRPGDTLAAEDFAKVRADM-KTEFGV---EPSSEDMNAFLMYPG--------VFRDYMKHLGKVGPLATCLPTPAFFYGLSVNEVIEFEVPGPSVVEAESQANAALPKTK-----VSIKLLRVGPREHENMRTCEWLVDGVTYEVSIKDPPPGTTSYSGPMANLSNNSHVACP 1201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102321.203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM14_ECTSI5.190e-16780.56Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus s... [more]
A0A7S3NKJ5_9STRA2.640e-9553.04Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
F0XWB2_AURAN1.510e-9354.97Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus ... [more]
A0A7S3Y4I5_HETAK1.740e-8851.61Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=26... [more]
A0A7S4DC20_HETAK1.640e-8751.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5JLQ2_9PHAE1.100e-8183.33Pyruvate carboxyltransferase domain-containing pro... [more]
A0A0G4GPU4_9ALVE3.400e-7947.99Lipoyl-binding domain-containing protein n=1 Tax=C... [more]
A0A7S2AEU2_9DINO4.180e-7343.61Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A812Y569_SYMPI1.430e-6142.01Pyc protein n=1 Tax=Symbiodinium pilosum TaxID=295... [more]
A0A812V7Y3_9DINO1.700e-6040.81Acetyl-CoA carboxytransferase n=1 Tax=Symbiodinium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102321contigH-elongata_contig102321:2..2247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score492.3
Seed ortholog evalue1.7e-136
Seed eggNOG ortholog2880.D8LM14
EggNOG free text desc.pyruvate carboxylase activity
EggNOG OGsCOG1038@1,COG4799@1,KOG0369@2759,KOG0540@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncarboxylase
Ec32 orthologEc-14_002460.2
Exons5
Model size969
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102321.203.1prot_H-elongata_contig102321.203.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig102321 26..2247 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929561.4226143-UTR-H-elongata_contig102321:1..251622929561.4226143-UTR-H-elongata_contig102321:1..25Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig102321 2..25 +
1691679070.9273605-UTR-H-elongata_contig102321:1..251691679070.9273605-UTR-H-elongata_contig102321:1..25Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig102321 2..25 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929561.4368014-CDS-H-elongata_contig102321:25..1161622929561.4368014-CDS-H-elongata_contig102321:25..116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 26..116 +
1691679070.938826-CDS-H-elongata_contig102321:25..1161691679070.938826-CDS-H-elongata_contig102321:25..116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 26..116 +
1622929561.4493048-CDS-H-elongata_contig102321:523..6421622929561.4493048-CDS-H-elongata_contig102321:523..642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 524..642 +
1691679070.9480965-CDS-H-elongata_contig102321:523..6421691679070.9480965-CDS-H-elongata_contig102321:523..642Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 524..642 +
1622929561.4609277-CDS-H-elongata_contig102321:869..10431622929561.4609277-CDS-H-elongata_contig102321:869..1043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 870..1043 +
1691679070.9572828-CDS-H-elongata_contig102321:869..10431691679070.9572828-CDS-H-elongata_contig102321:869..1043Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 870..1043 +
1622929561.4736695-CDS-H-elongata_contig102321:1299..14941622929561.4736695-CDS-H-elongata_contig102321:1299..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 1300..1494 +
1691679070.967032-CDS-H-elongata_contig102321:1299..14941691679070.967032-CDS-H-elongata_contig102321:1299..1494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 1300..1494 +
1622929561.4867613-CDS-H-elongata_contig102321:1881..22471622929561.4867613-CDS-H-elongata_contig102321:1881..2247Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 1882..2247 +
1691679070.9745555-CDS-H-elongata_contig102321:1881..22471691679070.9745555-CDS-H-elongata_contig102321:1881..2247Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig102321 1882..2247 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig102321.203.1

>prot_H-elongata_contig102321.203.1 ID=prot_H-elongata_contig102321.203.1|Name=mRNA_H-elongata_contig102321.203.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp
MYWYRVRDMYAPFEDGMKSGTARVFDHQIPAGGQYSNLMVQCKSMGIWNK
WESVLDMYRDVNQLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAQ
KGQVDFPDSVVALLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALPP
ADFAAVKSTLTEGKCGKVLGEVTDELVISYLLYPKARQRNATFVFDDYVS
IMDKSSTLLTSLPTPVFWYGLVVGQEFSMPATDPAQLLLKGDAAVAQKNG
GPPGYKMKLERVGPAKKGGMRTVSFTVAGAVQNVEVKDSVAGNDFDGPMA
TAGDPLQASWPSGF*
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mRNA from alignment at H-elongata_contig102321:2..2247+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig102321.203.1 ID=mRNA_H-elongata_contig102321.203.1|Name=mRNA_H-elongata_contig102321.203.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2246bp|location=Sequence derived from alignment at H-elongata_contig102321:2..2247+ (Himanthalia elongata Himel1 dioecious)
TACCTCGGACTCGAGCCCTACGACATGTACTGGTACCGGGTACGCGACAT GTACGCGCCTTTCGAGGACGGAATGAAGAGTGGCACGGCTAGGGTGTTCG ACCACCAGATCCCAGGTAAGGGGGCCAGCAGCACAAACAGCTGTGTGCTT GAGCGGTGGGGGGAGGACGGGGGAGGGAGGGAGATGTTCAAGTCGTATTG GCATGTCACACGCCAAGAATTCACGCCTTATTTTTAGGAATGCACGCGCT CGTCTAACCTAGCGCCACGCAGTGTCATTTGATGTGATGAACACACCACA CCTATTTTGGCGACAAAATCGGGCTTTGAAGATTTCGGTGTCAAAGCGAG GGTTCGGTGTTGTGTTGTGATTCACGACCCGCCGAGCCACGCGCCCCGAC AGCGAAACAATGTCGGCGCCATTTTTTCTTCTTCTTGCTGTTGGTTTTAT CTCGCTATTCCACTCCCCACCCCCACCCCCCCCCACCTTCCCGCTTCACG CTTCACGCGCCGCTCAAACGAGCAGGTGGACAGTACTCCAACCTGATGGT GCAGTGCAAGAGCATGGGCATCTGGAACAAGTGGGAAAGCGTGCTGGATA TGTACCGCGACGTCAACCAGTTGTTCGGTGACATCGTGAAGGTGCGGTCG AGATTTCGGACTTATGAATGCAACTACAACTACAACTGCATTTGTTTTTT GTTGTTTTTTGTTGTCGTCGTTGTACCCATCCCAAGCAACGGTTCCCCCA CTGTTTCAGCTCTTGTTCGATTACACGGTCCAAGTGGGTTGGCGTATCCT CTTCCCCTTCCCCCGCTTCGAGTCCCCCAAACCCTCCTCTTATATATCGC CTCGTTGATATTCTGTAGGTGACGCCGTCTTCGAAGTGCGTGGGCGACCT CGCCCTGTACCTCGTAACGAGAGGTCTGAAGGCCTCAGACGTGACCGATC CCGCCCAAAAGGGTCAGGTTGACTTCCCGGACTCCGTCGTGGCGCTGCTT GAGGGTCGCCTTGGCTTCCCTCACAGGGGCTTCCCAGAGGAGGTAACATA TTGGTGCATCGCGTAGGATCATGTCGCGTCGTGACCGTGGGAAACGTGCT GGTCTCAGCGCTGGGTTGATCTCGATTGACGGTTTCCTCATGCGCAATCA CGCTAAAAAAAGGTGTGTGTAGGTAAAACGACGCACAGACTACCTCGTGG AGACAATTTTCGACATTGGCATCACCATCGTGCTCCCCCCCCCTCTTTCT TTTTCTCTCTTTTCTTGCGTGGACGCTGGCGGCGGTCGTTGTTGGCAGGT GTCCAAGGCCATCCTGGGGGAGAAAAAACCCTTGACGACCAGGCCCAGCG CCGCGTTGCCGCCGGCTGACTTTGCAGCGGTGAAATCTACGCTGACGGAG GGCAAGTGCGGGAAGGTGTTGGGAGAAGTGACGGACGAGCTCGTCATCTC CTATCTGTTGTATCCTAAGGCGAGGCAACGTAACGCTACGTTTGTCGTTG GGCTGAGTTATATCTAGGTAACGTTCATTTTTTCCCTCCGCTTCTAGATC GTAATCGTCAAAATAAATGTTTTTCCCCGCAAAAAAGTCGCAGTCTTCGT ACGCACGCACACACACACACGGATGGCCCCGCGTTGCCCACACCCCCCCC CCCCCCCCCCCCACCCCATCCTTTCTTTAACATCCTAAGCACACCGCCAC CCGCGCCTGCATACNNNNNNNNNNCCCCCCAAAAAAACCGCCGTCCTCCC CCCCCCCCCCCCCCCCACCCGGGGGGCCCCCCCTTCCCCCCCCCCCCCCC CCCCATCACACTTTCTTCCTTTCTCACGCTATCATGGGCCCATGCGCGCG GCTGTAATGTTCTTCTTGCTCCGTGATCAGGTTTTCGACGACTACGTATC CATTATGGACAAGAGCTCAACGCTCCTCACGAGCCTCCCAACCCCCGTCT TCTGGTACGGCCTCGTCGTAGGCCAGGAGTTCTCGATGCCCGCGACTGAC CCCGCCCAGCTCCTCCTAAAGGGCGACGCAGCGGTCGCCCAGAAGAACGG TGGCCCACCGGGGTACAAGATGAAACTCGAGCGCGTTGGTCCCGCCAAGA AGGGTGGGATGCGAACGGTGTCGTTCACCGTCGCCGGGGCTGTGCAGAAC GTCGAGGTCAAGGACTCAGTCGCGGGCAACGATTTCGACGGACCGATGGC AACCGCGGGAGATCCGCTACAGGCGAGCTGGCCTTCTGGGTTTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig102321:2..2247+

>mRNA_H-elongata_contig102321.203.1 ID=mRNA_H-elongata_contig102321.203.1|Name=mRNA_H-elongata_contig102321.203.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1890bp|location=Sequence derived from alignment at H-elongata_contig102321:2..2247+ (Himanthalia elongata Himel1 dioecious)
ATGTACTGGTACCGGGTACGCGACATGTACGCGCCTTTCGAGGACGGAAT
GAAGAGTGGCACGGCTAGGGTGTTCGACCACCAGATCCCAGATGTACTGG
TACCGGGTACGCGACATGTACGCGCCTTTCGAGGACGGAATGAAGAGTGG
CACGGCTAGGGTGTTCGACCACCAGATCCCAGCAGGTGGACAGTACTCCA
ACCTGATGGTGCAGTGCAAGAGCATGGGCATCTGGAACAAGTGGGAAAGC
GTGCTGGATATGTACCGCGACGTCAACCAGTTGTTCGGTGACATCGTGAA
GCAGGTGGACAGTACTCCAACCTGATGGTGCAGTGCAAGAGCATGGGCAT
CTGGAACAAGTGGGAAAGCGTGCTGGATATGTACCGCGACGTCAACCAGT
TGTTCGGTGACATCGTGAAGGTGACGCCGTCTTCGAAGTGCGTGGGCGAC
CTCGCCCTGTACCTCGTAACGAGAGGTCTGAAGGCCTCAGACGTGACCGA
TCCCGCCCAAAAGGGTCAGGTTGACTTCCCGGACTCCGTCGTGGCGCTGC
TTGAGGGTCGCCTTGGCTTCCCTCACAGGGGCTTCCCAGAGGAGGTGACG
CCGTCTTCGAAGTGCGTGGGCGACCTCGCCCTGTACCTCGTAACGAGAGG
TCTGAAGGCCTCAGACGTGACCGATCCCGCCCAAAAGGGTCAGGTTGACT
TCCCGGACTCCGTCGTGGCGCTGCTTGAGGGTCGCCTTGGCTTCCCTCAC
AGGGGCTTCCCAGAGGAGGTGTCCAAGGCCATCCTGGGGGAGAAAAAACC
CTTGACGACCAGGCCCAGCGCCGCGTTGCCGCCGGCTGACTTTGCAGCGG
TGAAATCTACGCTGACGGAGGGCAAGTGCGGGAAGGTGTTGGGAGAAGTG
ACGGACGAGCTCGTCATCTCCTATCTGTTGTATCCTAAGGCGAGGCAACG
TAACGCTACGTTTGTGTCCAAGGCCATCCTGGGGGAGAAAAAACCCTTGA
CGACCAGGCCCAGCGCCGCGTTGCCGCCGGCTGACTTTGCAGCGGTGAAA
TCTACGCTGACGGAGGGCAAGTGCGGGAAGGTGTTGGGAGAAGTGACGGA
CGAGCTCGTCATCTCCTATCTGTTGTATCCTAAGGCGAGGCAACGTAACG
CTACGTTTGTTTTCGACGACTACGTATCCATTATGGACAAGAGCTCAACG
CTCCTCACGAGCCTCCCAACCCCCGTCTTCTGGTACGGCCTCGTCGTAGG
CCAGGAGTTCTCGATGCCCGCGACTGACCCCGCCCAGCTCCTCCTAAAGG
GCGACGCAGCGGTCGCCCAGAAGAACGGTGGCCCACCGGGGTACAAGATG
AAACTCGAGCGCGTTGGTCCCGCCAAGAAGGGTGGGATGCGAACGGTGTC
GTTCACCGTCGCCGGGGCTGTGCAGAACGTCGAGGTCAAGGACTCAGTCG
CGGGCAACGATTTCGACGGACCGATGGCAACCGCGGGAGATCCGCTACAG
GCGAGCTGGCCTTCTGGGTTTTAAGTTTTCGACGACTACGTATCCATTAT
GGACAAGAGCTCAACGCTCCTCACGAGCCTCCCAACCCCCGTCTTCTGGT
ACGGCCTCGTCGTAGGCCAGGAGTTCTCGATGCCCGCGACTGACCCCGCC
CAGCTCCTCCTAAAGGGCGACGCAGCGGTCGCCCAGAAGAACGGTGGCCC
ACCGGGGTACAAGATGAAACTCGAGCGCGTTGGTCCCGCCAAGAAGGGTG
GGATGCGAACGGTGTCGTTCACCGTCGCCGGGGCTGTGCAGAACGTCGAG
GTCAAGGACTCAGTCGCGGGCAACGATTTCGACGGACCGATGGCAACCGC
GGGAGATCCGCTACAGGCGAGCTGGCCTTCTGGGTTTTAA
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