mRNA_H-elongata_contig127375.2028.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: D7FQU6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU6_ECTSI) HSP 1 Score: 170 bits (431), Expect = 2.710e-47 Identity = 77/90 (85.56%), Postives = 83/90 (92.22%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD 270
QGMNFVAL+LL+AC GDDE AFWIL GMC+ L L GLWCQGLERLDLCFF+L+RLL+ HCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD
Sbjct: 1240 QGMNFVALALLEACEGDDENAFWILAGMCENLELGGLWCQGLERLDLCFFSLERLLRRHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTD 1329
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A2C9MAM6_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9MAM6_BIOGL) HSP 1 Score: 70.5 bits (171), Expect = 3.370e-12 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QG++F+A +LL +E AF +L + L L+ QG + L L F+ L+RL++ H P L H ++ G+E+ MF S+WF+TLFT+
Sbjct: 462 QGLSFLAAALLLHMP--EEQAFCVLVKIMYDYQLRELFKQGFQVLHLKFYQLERLMQDHLPDLYDHFAEMGLEIHMFASQWFLTLFTA 547
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A2T7NKP9_POMCA (Uncharacterized protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKP9_POMCA) HSP 1 Score: 70.5 bits (171), Expect = 3.440e-12 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QG++F+A +LL +E AF +LT + L L+ QG E L L F+ L+RLL+ L +H D G+E+ MF S+WF+TLFT+
Sbjct: 616 QGLSFLAAALLLHMP--EEQAFCVLTKIMFDYGLRNLFKQGFEELHLKFYQLERLLQDQMSDLYEHFMDMGLEVHMFASQWFLTLFTA 701
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A1V9YXP8_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXP8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.720e-12 Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLE---GLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QGMNF+ LL+ A D+ FW +C+ L+ G +L F LD L++ P L H+ +GV +SMF +RWF+TLF+S
Sbjct: 747 QGMNFIVRLLLENEANDEAAVFWTFVQLCEGSSATTSCALFDAGFHQLQTLFTKLDILIREQMPDLHIHMERQGVHVSMFAARWFLTLFSS 837
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A7S0I2Q3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I2Q3_9CRYP) HSP 1 Score: 68.6 bits (166), Expect = 1.590e-11 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLF 258
QGMNF+ LL E AFW+L M R L L+ +L + F LDRL+ PSL QH S++G +++ FTS W +TLF
Sbjct: 292 QGMNFLCAILLLHMR--QEHAFWVLVQMMRRYRLRDLYLSRSPQLAVELFKLDRLILSCTPSLHQHFSEQGFDVTTFTSEWLLTLF 375
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A024U9D0_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9D0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.610e-11 Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QGMNFV LL D+ FW +CD + L+ G L + F L+ L++ P + H +GV +SMF +RWF+TLFTS
Sbjct: 581 QGMNFVVRLLLDN-QKDEATVFWAFVNLCDAAPTQSLYEPGFHTLHVLFGKLEVLVQQQMPDVYNHFITQGVAVSMFAARWFLTLFTS 667
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: J9ITY4_9SPIT (TBC domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ITY4_9SPIT) HSP 1 Score: 68.6 bits (166), Expect = 1.620e-11 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTST 267
QGMNF++ LL D+ +AF++L + L+ ++ G E L +D LLK P+L+QH D VE+ MF+S WF++LFTST
Sbjct: 669 QGMNFLSACLLLH--SDEVIAFYLLETLLSDYELKDVYMSGFEGLYKHCKIVDALLKEKLPNLQQHFKDNQVEVEMFSSDWFISLFTST 755
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A0P4WHT7_SCYOL (Uncharacterized protein n=6 Tax=Portunidae TaxID=6757 RepID=A0A0P4WHT7_SCYOL) HSP 1 Score: 68.6 bits (166), Expect = 1.640e-11 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QG++F+A +LL +E F +L + L L+ G E L + FF L +L++ H P L QH ++GVE+ MF S+WF+TL+T+
Sbjct: 694 QGLSFLAAALLLHMP--EEQTFCVLKRIMFEYGLRELFRDGFEVLHMRFFQLGKLIEEHIPELWQHFQEQGVEVHMFASQWFLTLYTA 779
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A7S2PZU8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PZU8_9DINO) HSP 1 Score: 67.0 bits (162), Expect = 2.160e-11 Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTL 255
QGM F+ LL +D AF +L + D + L+ GL L+ FF L RLL H PSL HL+ +GVE +M+ S+WF+T+
Sbjct: 66 QGMGFICGVLLMYMCEED--AFLMLISLLDNYRMSKLFMPGLPLLNKYFFQLQRLLAMHMPSLCNHLAQQGVEPTMYASKWFMTV 148
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Match: A0A4Y2D245_ARAVE (Rab GTPase-activating protein 1-like n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2D245_ARAVE) HSP 1 Score: 68.2 bits (165), Expect = 2.220e-11 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 1 QGMNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLDRLLKHHCPSLRQHLSDEGVELSMFTSRWFVTLFTS 264
QG +F+A +LL +E AF IL + L L+ G E L L + L++L++ P L H +D G+E+ MF S+WF+TLFTS
Sbjct: 721 QGQSFLAAALLLHIP--EEQAFSILVKIMFEYGLRNLFKNGFEELHLRLYQLEKLIEEQIPELHAHFTDLGIEMHMFASQWFLTLFTS 806 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127375.2028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127375.2028.1 >prot_H-elongata_contig127375.2028.1 ID=prot_H-elongata_contig127375.2028.1|Name=mRNA_H-elongata_contig127375.2028.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp MNFVALSLLKACAGDDEMAFWILTGMCDRLHLEGLWCQGLERLDLCFFTLback to top mRNA from alignment at H-elongata_contig127375:730..1342- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127375.2028.1 ID=mRNA_H-elongata_contig127375.2028.1|Name=mRNA_H-elongata_contig127375.2028.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=613bp|location=Sequence derived from alignment at H-elongata_contig127375:730..1342- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127375:730..1342- >mRNA_H-elongata_contig127375.2028.1 ID=mRNA_H-elongata_contig127375.2028.1|Name=mRNA_H-elongata_contig127375.2028.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=528bp|location=Sequence derived from alignment at H-elongata_contig127375:730..1342- (Himanthalia elongata Himel1 dioecious)back to top |