mRNA_H-elongata_contig12732.2025.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 512 bits (1319), Expect = 1.010e-176 Identity = 255/415 (61.45%), Postives = 309/415 (74.46%), Query Frame = 1
Query: 10 GCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTP-EASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
GC T+TDLY R+ESDG + +GPI+ LDD + + +P ++ KWLLT++L++ G++FYCRG+SIGGDCDELRIQSTG TDF+EVR HGGS+YFE T+VTSWDTPN TPQ Y GRSF+NC+SE + E C GQ N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ S+IH+ YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDY+T GG A GIFLHRSSD ++DNVV+DMQDAG+A+LES +ADI++N F++V +GIR+SLG N V++N+F+D S GLYTYQGSD P + SDGRPSDN F +N I N GVKIKE D+T IT N FTGTS LEF DAQ+T W N
Sbjct: 86 GCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGN 487
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 486 bits (1252), Expect = 2.010e-167 Identity = 247/427 (57.85%), Postives = 298/427 (69.79%), Query Frame = 1
Query: 1 EDGGCGTMTDLYESR-VESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
E GC T+TDLY R E+DG + +GP+Y+LD + +PTSVT KWLL ++LYV NG+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF T+VTSWDTPN PQE YE GRSF+NC+SE + ETC+G ND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGD+ NS+IH+MYYG YSYGHQGGVWTNN+MHDNHQY +A GG AVGIFLHRSSD+ E+Y N +++M DAG+A+LESF+ADIHDN V +GIR+SLG G N VYDN F+DCS +GLYTY GSD P+ S+ GRP+ N+F +N ++N+ GVK K +DN +T N FTGT LEF DAQ T WS N
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 3.670e-167 Identity = 244/415 (58.80%), Postives = 297/415 (71.57%), Query Frame = 1
Query: 10 GCGTMTDLYESR-VESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
GC TMTDLY R E+DG + +GP+Y+LDDD + P+ +T WLL ++LY+ G +FYC+GTS GGDC++LRIQSTGS DF+EVRGHGGSLYFEDT+VTSWDTPN PQE YE+GRSF+NC+SE + + CEG N+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+T S+IH++YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDY+TIA GG +A GIFLHRSSD ++DN + +MQDAG+A+LESFDA I+ N YGIR+SLG G+N VY N F D S+YGLYTY+GSD P+ S DGRPS N N + + GVKIKE D+ NTF EF ++ +T+WS N
Sbjct: 448 GCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 1.670e-159 Identity = 229/416 (55.05%), Postives = 288/416 (69.23%), Query Frame = 1
Query: 7 GGCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEY-ESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
GGC T++DLY + + +GP+++LD +D + + T+ TGKWLLT+DL+V G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFEDT+VTSWD PQE Y+DGRSFI C+SE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+ S+IH+MYYG+YS+GHQGGVWTNN MHDNHQYGFDPHDDSDY+ IA GG A GIFLHRS D E+Y N + +M DAG+A+LE+ DIHDN +GIR+ LG +N V+DNVF + G++TY GSD P GRP DN FY+NTI TETGVKIKE+DN +IT N F+GT+ +EF++A D VWS N
Sbjct: 9 GGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 2.440e-144 Identity = 206/348 (59.20%), Postives = 249/348 (71.55%), Query Frame = 1
Query: 22 MTDLYESR-VESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSK 1038
MTDLY R E DG + +GP+Y+LDDD + P+ +T WLL ++LY+ G +FYC+GTS GGDC++LRIQSTGS DF+EVRGHGGSLYFEDT+VTSWDTPN PQE YE GRSF+NC+SE + + CEG N+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ S+IH++YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDY+T GG +AVGIFLHRSSD ++DN + +MQDAG+A+LE+FDA I+ NT YGIR+SLG G+N+VY N F D S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLT------------RIIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 7.150e-138 Identity = 221/428 (51.64%), Postives = 284/428 (66.36%), Query Frame = 1
Query: 1 EDGGCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDET--CEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDES------NPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEA-SSDGRPSDNSFYDNTISNT--ETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
E GGCGT+T +YE++ E DG P+Y+LD+++D++ + TG WLL +L V +GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E DGRSFINC+++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C + N E+F+ NVYGD+ NS I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD +TI+ GGE AVGIFLHRSSD E++DNVVY+MQDAG+A++ES+DA+I+DN+FTN YGIR+SLG G N++ +N+F ++YGLYTY GSD P+ +S+GRPSDN F NTI GV IKE D+ N FTG ST EF+D+ DT W N
Sbjct: 194 EGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 400 bits (1029), Expect = 4.620e-135 Identity = 223/389 (57.33%), Postives = 259/389 (66.58%), Query Frame = 1
Query: 85 ILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLEFDDAQDTVWSSN 1251
+LDD + + SPTSVT KWLL S+LYV +G+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF T+VTSWDTPN PQE YE GRSF+NC+SE + ETC+G+ ND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGD+ NSNIH+MYYG+YSYGHQGGVWTNN+MHDNHQYGFDPHDDSDY+TIAXXXXXXXXXXXXX GG AVGIFLHRSSD+ E+Y G D P+ S+ GRP+ N+F +N I+NT GVKIK +DN I+ N FTGT LEF DAQ T WS N
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 414 bits (1065), Expect = 2.960e-134 Identity = 216/422 (51.18%), Postives = 278/422 (65.88%), Query Frame = 1
Query: 7 GGCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEYESD--ETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSD--GRPSDNSFYDNTISNTETGVKIKEADNTTITGNTFTGTSTLE---FDDAQDTVWSSN 1251
GGC T+TD+Y ++ G GP+++LD +D+++ S TG WLL D++V GS+ G GGD LRIQSTGS D+ E+RGHGGSL F DT VTSWDT Y+ RSFI C+SE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C+++ NPEVF+ T V GD+ +S+I+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD + IA GGE AVGIFLHRSSD CE++ N VYDM+DAG+AI+ES A IHDNTFTNV YGIR+S+G N+V +N F +C +YG+YTYQG+D PEAS D G DN+F+ NT+ E GVKI++A+ T N F S+ E F+D +D VW++N
Sbjct: 405 GGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 365 bits (938), Expect = 2.490e-119 Identity = 195/398 (48.99%), Postives = 246/398 (61.81%), Query Frame = 1
Query: 7 GGCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEY--ESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTF 1194
GGC T+ ++ESR +GP+Y +D D + TS TG WLLT +LYV +G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT N+P E DGRS+I+ +SE + DETCEG N GE RMDI SE+GYLG++DSESYGLTWKVRGFC D+SNPEVFD NVYG+V +S+IH+M +G+Y+YGHQ G W NKMHDN YGFDPHDDSD++TI G E++ GIFLHRSSD + N V+D DAGLA+LESF+AD+ +NTF N YG+R S+G N+ +N + ++Y Y+Y G+D P+ S GR +N F N+ S E +KIKEAD T N F
Sbjct: 67 GGCVTLGQIWESRAG------KGPLYAVDPDSGNV--STSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 365 bits (938), Expect = 2.820e-119 Identity = 203/421 (48.22%), Postives = 258/421 (61.28%), Query Frame = 1
Query: 7 GGCGTMTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFEDTLVTSWDTPNNTPQEVYEDGRSFINCLSEY--ESDETCEGQPTNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCTDESNPEVFDTTNVYGDVTNSNIHNMYYGIYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYITIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGESAVGIFLHRSSDSCEIYDNVVYDMQDAGLAILESFDADIHDNTFTNVTYGIRISLGGGSNMVYDNVFDDCSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIKEADNTTITGNTF-TGTS---TLEFDDAQDTVWSSN 1251
GGC T+ ++ESR + P+Y +D D + S T TG WLLT +LYV +G GT GGD DELR+ ST T N +R HGGSL F T V SWDT N+P E DGRS+I+ +SE + DETCEG N GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC D+SNPE+FD NVYG++ +S+IH++ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD++TI G E++ GIFLHRSSD + N V+D DAGLA+LESF+AD+ +NTF N YG+R+S+G N+ +N+ + SKY YTY GSD P+ S GR +N F N+ S E +KIKEAD T N F G + + FDDA ++V N
Sbjct: 71 GGCATLGQIWESRAG------KAPLYAVDPDSGDV-SETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYIN-LRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGN 482 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12732.2025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12732.2025.1 >prot_H-elongata_contig12732.2025.1 ID=prot_H-elongata_contig12732.2025.1|Name=mRNA_H-elongata_contig12732.2025.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp MTDLYESRVESDGWTPQGPIYILDDDDDIMYSPTSVTGKWLLTSDLYVRNback to top mRNA from alignment at H-elongata_contig12732:1514..7871- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12732.2025.1 ID=mRNA_H-elongata_contig12732.2025.1|Name=mRNA_H-elongata_contig12732.2025.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6358bp|location=Sequence derived from alignment at H-elongata_contig12732:1514..7871- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12732:1514..7871- >mRNA_H-elongata_contig12732.2025.1 ID=mRNA_H-elongata_contig12732.2025.1|Name=mRNA_H-elongata_contig12732.2025.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2460bp|location=Sequence derived from alignment at H-elongata_contig12732:1514..7871- (Himanthalia elongata Himel1 dioecious)back to top |