prot_H-elongata_contig12723.2023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12723.2023.1
Unique Nameprot_H-elongata_contig12723.2023.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length237
Homology
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BLAST of mRNA_H-elongata_contig12723.2023.1 vs. uniprot
Match: A0A6H5KUF2_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF2_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 7.550e-36
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 0 
Query:    1 MTCYWEFKIEVFTGVRLDIGVATRHSVRRGGLDKDEVWVFDCYGRVCHGNRIRGYGLKVKAGDTVGVMLNTADCSLSFFLQG 82
            MTCYWE KI+VFTGVRL++GVATR S+ RGG DKDE WV DCYGR CHG R+RGYG K+KAGD +GV+LNTAD SLSFF++G
Sbjct:  143 MTCYWEVKIQVFTGVRLEVGVATRRSIYRGGCDKDECWVIDCYGRACHGTRLRGYGCKLKAGDVLGVLLNTADDSLSFFVKG 224
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BLAST of mRNA_H-elongata_contig12723.2023.1 vs. uniprot
Match: A0A7S4FMU5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FMU5_9EUGL)

HSP 1 Score: 106 bits (264), Expect = 7.690e-25
Identity = 75/197 (38.07%), Postives = 103/197 (52.28%), Query Frame = 0 
Query:   40 FDCYGRVCHGNRIRGYGLKVKAGDTVGVMLNTADCSLSFFLQGKSMGTAFRNVRPPAGQGLYPVVVLPSVAHETVRLTRCPLAGGASFPAPVRSLLATKLEPRRHPDDWSIIVQTYEEQSIYRLRGLDPARTTVGSLKKALVRDKTMKMFSSRQVALRTGGELLTDDSALLSALGISFGTRGSQLQDIFMYLPHLIS 236
            FDC+GR     R   YG K++ G  VG++   A  +L FF  G+ MG A  ++ P   Q LYP++ +P V  E VRL R P      FP  V  L       R H DD  +IV++YE    YRL  LDP  TTV  +K+ L ++ +   F+  Q+ALR+GG+    + A L   G+SF      LQ I + + HLIS
Sbjct:    1 FDCWGRFHSQGRQMMYGGKMRTGAVVGLLYVCATRTLYFFEDGRCMGPAIADL-PDQNQLLYPILNIPCVPGEQVRL-RAPRK--VPFPTCVEGLTKQPWTLRAHDDDHKLIVESYEGLHTYRLPDLDPDTTTVFDIKRMLAKELS---FTPEQLALRSGGQEPLRNYASLRDSGVSFAPNRVHLQAITLSVTHLIS 190
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BLAST of mRNA_H-elongata_contig12723.2023.1 vs. uniprot
Match: D8LU41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU41_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.400e-9
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0 
Query:    1 MTCYWEFKIEVFTGVRLDIGVATRHSVRRGGLDKDEV 37
            MTCYWE  I+VFTGVRL++GVATR S+ RGG DKDEV
Sbjct:  142 MTCYWEVNIQVFTGVRLEVGVATRRSIYRGGCDKDEV 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12723.2023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KUF2_9PHAE7.550e-3674.39B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S4FMU5_9EUGL7.690e-2538.07Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
D8LU41_ECTSI2.400e-975.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003877SPRY domainSMARTSM00449SPRY_3coord: 2..122
e-value: 4.8E-10
score: 49.4
IPR003877SPRY domainPFAMPF00622SPRYcoord: 3..108
e-value: 1.0E-15
score: 57.9
NoneNo IPR availableGENE3D2.60.120.920coord: 1..119
e-value: 1.3E-21
score: 79.0
NoneNo IPR availablePANTHERPTHR12245:SF5SPRY DOMAIN-CONTAINING SOCS BOX PROTEIN 3coord: 4..120
NoneNo IPR availablePANTHERPTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINcoord: 4..120
IPR001870B30.2/SPRY domainPROSITEPS50188B302_SPRYcoord: 1..123
score: 15.008
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12723contigH-elongata_contig12723:807..8028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12723.2023.1mRNA_H-elongata_contig12723.2023.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12723 788..8038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12723.2023.1 ID=prot_H-elongata_contig12723.2023.1|Name=mRNA_H-elongata_contig12723.2023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MTCYWEFKIEVFTGVRLDIGVATRHSVRRGGLDKDEVWVFDCYGRVCHGN
RIRGYGLKVKAGDTVGVMLNTADCSLSFFLQGKSMGTAFRNVRPPAGQGL
YPVVVLPSVAHETVRLTRCPLAGGASFPAPVRSLLATKLEPRRHPDDWSI
IVQTYEEQSIYRLRGLDPARTTVGSLKKALVRDKTMKMFSSRQVALRTGG
ELLTDDSALLSALGISFGTRGSQLQDIFMYLPHLIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003877SPRY_dom
IPR001870B30.2/SPRY
IPR013320ConA-like_dom_sf