prot_H-elongata_contig127174.2017.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127174.2017.1
Unique Nameprot_H-elongata_contig127174.2017.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: D8LDN6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN6_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 6.420e-46
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    4 RGQSMDCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLRR 113
            +G SMD G VH+FTS+FFTKLTE+K+ +F  AY  V+HWTRNVDLF KKFV VPVVE+MHWSLACL NLDKLE  K   DY  DE +PC+LFLDSL MH  +RIY+YLRR
Sbjct:  392 KGGSMDDGNVHVFTSHFFTKLTESKIYDFDAAYSKVQHWTRNVDLFKKKFVLVPVVEDMHWSLACLCNLDKLEVDKEAADYQSDEAQPCMLFLDSLDMHYASRIYDYLRR 501          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A6H5KTD8_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.440e-44
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
Query:    4 RGQSMDCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLRR 113
            +G SMD G+VH+FTS+FFTKLTE+++ +F  AY  V+HWTR+VDLF KKFV VPVVE++HWSLACL NLDKLE  K   DY  DE +PC+LFLDSL MH  +RIY+YLRR
Sbjct:  694 KGGSMDDGKVHVFTSHFFTKLTESEIYDFDAAYSKVQHWTRSVDLFKKKFVLVPVVEDLHWSLACLCNLDKLEVDKEAADYQSDEAQPCMLFLDSLDMHYASRIYDYLRR 803          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: D7FWD8_ECTSI (SUMO deconjugating cysteine peptidase Ulp2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.970e-22
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    8 MDCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEA-----GKGGGDYGPD 87
            MD  +VHIF+S FFTKL E  +  F  AY GVK W+R+VDLFS KFV VPVVE+ HW LACL NL+KLEA     G+G   + PD
Sbjct:  234 MDETKVHIFSSSFFTKLVEKDIDEFNAAYGGVKRWSRHVDLFSMKFVMVPVVEDEHWRLACLCNLNKLEAKWKDTGRGDLVFDPD 318          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A7S3JWX9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWX9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.040e-19
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 0
Query:   12 RVHIFTSYFFTKLTETKL--QNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLA-----------CLTNL-----------DKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLR 112
            +VH+F+S+FFTKLTE K+  + F  A++ V+ WTR +D+F  KF+ VPVV+ +HWSLA           C T++           D ++      D   D E+PC++F+DSL MH+   +++ ++
Sbjct:  149 QVHVFSSHFFTKLTEIKITTRTFQEAHKRVERWTRRLDIFKLKFIMVPVVQQLHWSLAVICHPDRIVDMCETHINHVKKKGTTADDAVDIDVDDEDEEIDPEQPCVVFMDSLKMHKENEVFKAIK 273          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A7S3JWU2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWU2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.270e-19
Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 0
Query:   12 RVHIFTSYFFTKLTETKL--QNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLA-----------CLTNL-----------DKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLR 112
            +VH+F+S+FFTKLTE K+  + F  A++ V+ WTR +D+F  KF+ VPVV+ +HWSLA           C T++           D ++      D   D E+PC++F+DSL MH+   +++ ++
Sbjct:  349 QVHVFSSHFFTKLTEIKITTRTFQEAHKRVERWTRRLDIFKLKFIMVPVVQQLHWSLAVICHPDRIVDMCETHINHVKKKGTTADDAVDIDVDDEDEEIDPEQPCVVFMDSLKMHKENEVFKAIK 473          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: K0RDN9_THAOC (ULP_PROTEASE domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RDN9_THAOC)

HSP 1 Score: 84.3 bits (207), Expect = 1.180e-16
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 0
Query:    2 VDRGQSMDCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYL 111
            + RG++     VH FTS+F T L +   +        V  WT N D+F KKFVFVP+ +++HWSL  + N  ++ A     D   + E PC+LFLDSL MH   +I + L
Sbjct:  756 ISRGENPQDSSVHFFTSHFMTTLRDDGPE-------AVASWTANKDIFKKKFVFVPINKDLHWSLCVIVNPGEI-ASVYDEDVSSECEHPCLLFLDSLKMHNKNQIRKTL 857          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A2V3J0H8_9FLOR (Ubiquitin-like-specific protease 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0H8_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 7.530e-16
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   16 FTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEA-----GKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLRR 113
            F+S+FF +L  TK     + Y GVK WT+NVDLF+ KFVFVP+ E+ HWSL  + NLDKL+       K    Y    E P I++LDSL   + +     +RR
Sbjct:  408 FSSFFFGRLRRTK----PIDYEGVKSWTKNVDLFANKFVFVPICESYHWSLIIVANLDKLDRWLERDAKDMTVY----ETPRIIYLDSLDPSRGSSFGNTIRR 502          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A197JRI9_9FUNG (Cysteine proteinase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JRI9_9FUNG)

HSP 1 Score: 78.2 bits (191), Expect = 9.590e-16
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   12 RVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEAGKGGGDYGPDEERPCILFLDSLGMHQPTRIYEYLR 112
            +V+IF ++F+ +L    ++  T +Y  +K+WT  VD+FSKK++ VP+ EN+HW L  + N   L             E+P IL LDSLG   PT +++ LR
Sbjct:   11 QVYIFNTFFYQRLLSKPVKGATSSYNSIKNWTAKVDIFSKKYIIVPIHENLHWYLVVIVNPGLLL------QMAETIEQPYILCLDSLGGTHPT-VFKVLR 104          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A7S3ZZX5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZX5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.110e-15
Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   13 VHIFTSYFFTKLTET----KL----QNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDKLEAGKGGG-----DYGPDEE---------RPCILFLDSLGMHQPTRIYEYLR 112
            VH F+S+FFTKL E     KL    +    A+  V+ WTR VD+F+KKF+ VPVVE++HWSLA + +  +L            D G  E+         RPC++ +DSL MH   +I ++LR
Sbjct:  100 VHAFSSHFFTKLREGDSRGKLKPDSEKAQRAHARVERWTRGVDVFAKKFLLVPVVEDLHWSLAIVCHPGELAKRAVARERRELDVGATEDEXXXXDCPARPCVIHMDSLRMHSAKKIEKWLR 221          
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Match: A0A168NYH9_ABSGL (ULP_PROTEASE domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NYH9_ABSGL)

HSP 1 Score: 78.6 bits (192), Expect = 1.180e-14
Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    9 DCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFSKKFVFVPVVENMHWSLACLTNLDK-LEAGKGGGDYGPDEERPCILFLDSLGMHQPT 105
            D    HIF+S+F+ +LT+    +  + Y  V+ WT ++DLFSKK+   P+ E  HW L  + N+DK + +  G  D     +RP +  LDSLG    T
Sbjct:  391 DTKNTHIFSSFFYNRLTQGMASSGQVQYENVRKWTTDIDLFSKKYAIFPINEKWHWYLVLVCNIDKCVPSETGAADPLNTRDRPIMFVLDSLGGTSKT 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127174.2017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN6_ECTSI6.420e-4669.09ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KTD8_9PHAE1.440e-4466.36ULP_PROTEASE domain-containing protein n=1 Tax=Ect... [more]
D7FWD8_ECTSI2.970e-2258.82SUMO deconjugating cysteine peptidase Ulp2 n=1 Tax... [more]
A0A7S3JWX9_9STRA2.040e-1936.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3JWU2_9STRA2.270e-1936.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K0RDN9_THAOC1.180e-1639.09ULP_PROTEASE domain-containing protein n=1 Tax=Tha... [more]
A0A2V3J0H8_9FLOR7.530e-1643.69Ubiquitin-like-specific protease 2 n=1 Tax=Gracila... [more]
A0A197JRI9_9FUNG9.590e-1637.62Cysteine proteinase n=1 Tax=Linnemannia elongata A... [more]
A0A7S3ZZX5_9STRA1.110e-1539.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A168NYH9_ABSGL1.180e-1436.73ULP_PROTEASE domain-containing protein n=1 Tax=Abs... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..113
NoneNo IPR availableGENE3D3.30.310.130coord: 13..113
e-value: 1.0E-24
score: 89.0
NoneNo IPR availablePANTHERPTHR47764FAMILY NOT NAMEDcoord: 11..103
NoneNo IPR availablePANTHERPTHR47764:SF2UBIQUITIN-LIKE-SPECIFIC PROTEASE 2A-RELATEDcoord: 11..103
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 12..109
e-value: 7.3E-15
score: 55.4
IPR003653Ulp1 protease family, C-terminal catalytic domainPROSITEPS50600ULP_PROTEASEcoord: 1..113
score: 14.118
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 10..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127174contigH-elongata_contig127174:334..1759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127174.2017.1mRNA_H-elongata_contig127174.2017.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127174 334..1759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127174.2017.1 ID=prot_H-elongata_contig127174.2017.1|Name=mRNA_H-elongata_contig127174.2017.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MVDRGQSMDCGRVHIFTSYFFTKLTETKLQNFTLAYRGVKHWTRNVDLFS
KKFVFVPVVENMHWSLACLTNLDKLEAGKGGGDYGPDEERPCILFLDSLG
MHQPTRIYEYLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
IPR038765Papain-like_cys_pep_sf