prot_H-elongata_contig127091.2012.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig127091.2012.1
Unique Nameprot_H-elongata_contig127091.2012.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length409
Homology
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 384 bits (987), Expect = 9.710e-117
Identity = 203/435 (46.67%), Postives = 280/435 (64.37%), Query Frame = 0
Query:    1 QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAI-------------PLDAQGQIPEMENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVENLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEQR-------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            QRGG++KAASTL++PP  PR++ TL TLR KHP E    I             P     +I  +E  F   TV A I++ NPQ + GPSGLR+S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ +R++  V CR+YG  LA++F+P GQYGVAV GG E++A  A L  + G  +L+YD +NAFNS+ R   LPALA+++  M+PYA+N+YAREP KLL++ D G + V+ SA GV+QGCNLGPLCYSAG LK+L +FRA+PPV GA+ ++FIDD+ V+LP   + +  A   VT W+Q  +   G++LNR KS+ L   G   +   E+ R             GM +VGVPV    + +        GEP +L++ +  ++DAQAS QILR SA +RL++LLR++PP
Sbjct: 1091 QRGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPP 1524          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 1.430e-116
Identity = 208/439 (47.38%), Postives = 273/439 (62.19%), Query Frame = 0
Query:    1 QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIP------LDAQGQ---------IPEMENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEQR-------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            + GGITKAAS LISP P+PR++ TL  LR  HP EDP  I       + A G          + E +  FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VL+R+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A     +V Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++             GM VVG+PV TE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ P
Sbjct:   51 ESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAP 489          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 5.270e-116
Identity = 210/439 (47.84%), Postives = 271/439 (61.73%), Query Frame = 0
Query:    1 QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIP------LDAQGQ---------IPEMENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLT-EEQR------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            + GGITKAAS LISP P+PR++ TL  LR  HP EDP  I       + A G          + E +  FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VL+R+I   FC +Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A     +V Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  +GI L+  KS+ L   G+    LT +EQR            GM++VGVPV TE FQR FV     G PAEL+R L  ++D QAS+Q+LRLS   RL +LLRT+ P
Sbjct:   51 ESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAP 489          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 2.620e-114
Identity = 207/439 (47.15%), Postives = 270/439 (61.50%), Query Frame = 0
Query:    1 QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIPLDAQGQIP---------------EMENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEQR-------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            + GGITKAAS LISP P+PR++ TL  LR  HP EDP  I       I                E +  FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VL+R+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A     +V Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++             GM VVG+PV TE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ P
Sbjct:   51 ESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAP 489          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 1.740e-95
Identity = 168/347 (48.41%), Postives = 218/347 (62.82%), Query Frame = 0
Query:    1 QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIP------LDAQGQ---------IPEMENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAA-LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQAL 330
            + GGITKAAS LISP P+PR++ TL  LR  HP EDP  I       + A G          + E +  FE   +K  +KKANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VL+R+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A     +V Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L
Sbjct:   51 ESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.430e-87
Identity = 159/337 (47.18%), Postives = 209/337 (62.02%), Query Frame = 0
Query:   87 LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLT-EEQR------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VL+R+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A     +  Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  +GI L+  KS  L   G+    LT +EQR            GM++VGVPV TE FQR FV     G PAEL+  L  ++D Q S+Q+LR+S   RL +LLRT+ P
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAP 337          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 4.590e-86
Identity = 158/337 (46.88%), Postives = 213/337 (63.20%), Query Frame = 0
Query:   87 LCDELVENLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEQR-------------GMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTVPP 409
            + D   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VL+R+I   F R+Y   +A+ F+   Q+G  V GGVEI+A TA L  + G TILS+DG+NA+NS+ R   LPA+A +   +V Y  N+YAR   KLLF+++ G +EVV S RGV+QGCNLG   +  G L I+ EF   PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++             GM VVG+PV TE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ P
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAP 337          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 2.220e-43
Identity = 136/441 (30.84%), Postives = 208/441 (47.17%), Query Frame = 0
Query:    3 GGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIPLDAQGQIPEM--------------ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEN------LAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQAL-------------LAYGVGPEQLTEEQRGMSVVGVPVETEQFQRDFVQKAVNGEPAELVRALVP-MEDAQASFQILRLSATSRLSYLLRTVPP 409
            GG+  AA  L++ P +P +  T   L+ K P ED AA+       I E               E  F+   +  VI   +  S AG  G R+SHL++    ++          + +  LV      P  FWTL   ++L ALG+K RPV  G   +R+I A   R++  KL + F+   Q+GVAV+GGVE +A+ A L  + G  I+  D  NAFN+  R   +   A+ +  +V Y +  Y   P   ++E+D G    +E   GV+QG  +GP  +S   + I+ + +      G    +++DDIT+ L     L   ++  +T+ L   L   GI +NR KS AL             L  GVG   LT    G++VVGVP+ T+ + R+F  K +    AE +  ++P M D Q +  I  LS   R +Y+ R + P
Sbjct:  472 GGVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTD-LVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVG---LTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDP 905          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.810e-43
Identity = 132/437 (30.21%), Postives = 207/437 (47.37%), Query Frame = 0
Query:    3 GGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIPL------------DAQGQIPEM--ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEN------LAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIG-KVTEWLQKRLGVEGISLNRRKSQALLAYG----------VGPEQLTEEQRGMSVVGVPVETEQFQRDFVQKAVNGEPAE-LVRALVPMEDAQASFQILRLSATSRLSYLLRTV 407
            GG+  AA  L++  P+P +  T A L+ K P EDP  +              + +G  P    E  F+   +  V+ + +  S AG  G R+SHL++ +  ++          + +  L+      P  FWTL   ++L ALG+K RPV  G   +R+I A   R +  KL + F+   Q+GVAV+GGVE +A+ A L  + G+ ++  D  NAFN+  R   +   ++ V  +V Y +  Y   P K ++ +D G    +E   GV+QG  +GP  +    + I+ + RA     G    +++DDI++        D+TA   +VT  L   L   GI +NR KS AL   G          +G   L   + G++VVGVP+ T+ +  D   K +    AE L R LV M D Q +  +   S T R  Y+ R +
Sbjct:  301 GGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFK-----DITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGI 732          
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 3.860e-42
Identity = 129/436 (29.59%), Postives = 205/436 (47.02%), Query Frame = 0
Query:    3 GGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIPL------------DAQGQIPEM--ENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVEN------LAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYGKKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSIYRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVKQGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLDMTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYG----------VGPEQLTEEQRGMSVVGVPVETEQFQRDFVQKAV-NGEPAELVRALVPMEDAQASFQILRLSATSRLSYLLRTV 407
            GG+  AA  L++  P+P +  T A L+ K P EDP  +              + +G  P    E  F+   +  VI   +  S AG  G R+SHL++ +  ++          + +  L+      P  FWTL   ++L ALG+K RPV  G   +R+I A   R +  KL + F+   Q+GVAV+GGVE +A+ A L  + G+ ++  D  NAFN+  R   +   A+ V  +V Y +  Y   P K ++ +D G    +E   GV+QG  +GP  +    + I+ + RA     G    +++DDI++      + ++  I  + + L+      GI +NR KS AL   G          +G   L   + G++VVGVP+ T+ +  D   K +  G   +L R LV M D Q +  +   S T R  YL R +
Sbjct:  323 GGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELE----AVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGI 754          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127091.2012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN9.710e-11746.67Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JCM0_9PHAE1.430e-11647.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE5.270e-11647.84Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE2.620e-11447.15Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE1.740e-9548.41Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KSY9_9PHAE1.430e-8747.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE4.590e-8646.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE2.220e-4330.84Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE2.810e-4330.21Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE3.860e-4229.59Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 126..353
e-value: 1.3E-11
score: 44.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..354
score: 11.93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig127091contigH-elongata_contig127091:226..1575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig127091.2012.1mRNA_H-elongata_contig127091.2012.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig127091 226..1575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig127091.2012.1 ID=prot_H-elongata_contig127091.2012.1|Name=mRNA_H-elongata_contig127091.2012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=409bp
QRGGITKAASTLISPPPAPRDSRTLATLRGKHPTEDPAAIPLDAQGQIPE
MENLFEEATVKAVIKKANPQSAAGPSGLRYSHLQAALCDELVENLAAFAT
LVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLQRVIDAVFCRRYG
KKLADYFQPWGQYGVAVSGGVEIMALTATLGFEDGYTILSYDGQNAFNSI
YRHKFLPALAEIVLSMVPYASNLYAREPTKLLFELDGGGLEVVESARGVK
QGCNLGPLCYSAGSLKILNEFRASPPVPGARAVSFIDDITVILPPELSLD
MTAIGKVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEQRGMSVV
GVPVETEQFQRDFVQKAVNGEPAELVRALVPMEDAQASFQILRLSATSRL
SYLLRTVPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom