mRNA_H-elongata_contig12679.1987.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12679.1987.1
Unique NamemRNA_H-elongata_contig12679.1987.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: D7FHX1_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX1_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.430e-60
Identity = 100/172 (58.14%), Postives = 126/172 (73.26%), Query Frame = 1
Query:    4 GKYELHDAAIKGELERVKAILEDSTNNVNVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKGCDVNQRNLFYTT 519
            G+++LHDA + G++E+VK+ILE + + VN RGPKN +PLHCAAKG+ P                            FYGSA V+R LL+EVK+ DI+ALDFGSWT+LHYACNY+RG+CA LLID GASL K+SAELQL+ LHLAARSGNL TV+KL++ GC+ +QRNLFYTT
Sbjct:    2 GRFDLHDACMAGDVEKVKSILEATPDKVNARGPKNRSPLHCAAKGDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYGSAAVIRYLLDEVKDLDINALDFGSWTSLHYACNYNRGECADLLIDSGASLTKKSAELQLVALHLAARSGNLATVEKLIKNGCNASQRNLFYTT 173          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: A0A0D9RMC7_CHLSB (Transient receptor potential cation channel subfamily A member 1 n=24 Tax=Simiiformes TaxID=314293 RepID=A0A0D9RMC7_CHLSB)

HSP 1 Score: 82.8 bits (203), Expect = 6.390e-13
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LHDAA +G++E ++ I  DS+  V N      +TPLHCA + NQ E   +L+SRGAN  LR    M PL +A      +V+++LLE  K  DI+       TA+  AC  +  +   +L++ GA   K S +    P+H AA SG+   ++ +L  G
Sbjct:   67 LHDAAAEGQIELMEKITRDSSLEVLNEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHLAVQGTHNEVMKVLLEH-KTIDINLEGENGNTAVIIACTTNNSEALQILLNKGAKPCK-SNKWGCFPIHQAAFSGSKECMEIILRFG 221          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: TRPA1_MOUSE (Transient receptor potential cation channel subfamily A member 1 n=21 Tax=Muroidea TaxID=337687 RepID=TRPA1_MOUSE)

HSP 1 Score: 79.3 bits (194), Expect = 7.970e-12
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G++E ++ I+  S+  V N+     +TPLHCAA+ NQ E   +L+S+GAN  LR    M+PL +A  +G  + V  +L E K T+I+       TAL   C     +   +L++ GA L K S +    P+H AA SG    ++ +L  G
Sbjct:   68 LHHAAAEGQVELMELIINGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLSQGANPNLRNRNMMSPLHIA-VHGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSEALQILLEKGAKLCK-SNKWGDYPVHQAAFSGAKKCMELILAYG 222          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: UPI000154AD6D (Transient receptor potential cation channel, subfamily A, member 1, isoform CRA_a n=1 Tax=Mus musculus TaxID=10090 RepID=UPI000154AD6D)

HSP 1 Score: 79.3 bits (194), Expect = 7.980e-12
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G++E ++ I+  S+  V N+     +TPLHCAA+ NQ E   +L+S+GAN  LR    M+PL +A  +G  + V  +L E K T+I+       TAL   C     +   +L++ GA L K S +    P+H AA SG    ++ +L  G
Sbjct:   68 LHHAAAEGQVELMELIINGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLSQGANPNLRNRNMMSPLHIA-VHGMYNEVIKVLTEHKATNINLEGENGNTALMSTCAKDNSEALQILLEKGAKLCK-SNKWGDYPVHQAAFSGAKKCMELILAYG 222          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: A0A1D5QMT1_MACMU (Transient receptor potential cation channel subfamily A member 1 n=2 Tax=Macaca mulatta TaxID=9544 RepID=A0A1D5QMT1_MACMU)

HSP 1 Score: 77.8 bits (190), Expect = 2.450e-11
Identity = 55/157 (35.03%), Postives = 84/157 (53.50%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G++E ++ I  DS+  V N      +TPLHCA + NQ E   +L+SRGAN  LR    M PL +A      +V+++LLE  +  DI+       TA+  AC  +  +   +L++ GA   K S +    P+H AA SG+   ++ +L  G
Sbjct:   92 LHYAAAEGQIELMEKITRDSSLEVLNEMDDCGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHLAVQGTHNEVMKVLLEH-RTIDINLEGENGNTAVIIACTTNNSEALQILLNKGAKPCK-SNKWGCFPIHQAAFSGSKECMEIILRFG 246          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: A0A2H9SWI5_9BACT (Uncharacterized protein n=1 Tax=Parachlamydia sp. TaxID=2052048 RepID=A0A2H9SWI5_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 3.870e-11
Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNVNVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEK 480
            LH AA  G+LE VK +L  +T+ +NV+   + T L  AA+  +  V  YL++ GA+  +  A K  PL VA+  G  + V+LLL +     I+  +   +T L +A    + +    L+++ A      A  + +PLH+AA++G++ +VK LL K
Sbjct:  239 LHVAAQAGDLESVKLLLPKTTDGINVKENYDSTSLFFAAESGKANVVEYLLNNGADANIPDAGKRVPLHVAAQAGDLESVKLLLPKTTG-GINVKENYDYTPLFFAVESGKANVVEYLLNNEADANIPDAG-ERVPLHVAAQTGDMESVKLLLPK 391          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: A0A7J8C4Q5_ROUAE (Transient receptor potential cation channel subfamily A member 1 n=3 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8C4Q5_ROUAE)

HSP 1 Score: 76.3 bits (186), Expect = 7.440e-11
Identity = 55/157 (35.03%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G+++ ++ I+ DST  V NV     +TPLH AA  NQ     +L+S+GAN  LR    M PL +A   G  +VV++L E  ++TD +       TAL  AC     +   +L++ GA   K + +    P+H AA SG    +  +L+ G
Sbjct:   68 LHHAAEEGQVQLMELIVSDSTCEVLNVMDNYGNTPLHWAAVKNQAGSVKFLLSKGANPNLRNNSMMAPLHLAVQNGHNEVVKVLTEH-RSTDTNLDGENGNTALIIACFQDNSEALQMLLNKGAKACKAN-KWGYFPIHQAAFSGAKKCMDIILKYG 222          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: TRPA1_HUMAN (Transient receptor potential cation channel subfamily A member 1 n=12 Tax=Catarrhini TaxID=9526 RepID=TRPA1_HUMAN)

HSP 1 Score: 76.3 bits (186), Expect = 7.440e-11
Identity = 53/157 (33.76%), Postives = 84/157 (53.50%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G++E ++ I  DS+  V +      +TPLHCA + NQ E   +L+SRGAN  LR    M PL +A    + +V+++LLE  +  D++       TA+  AC  +  +   +L+  GA   K S +    P+H AA SG+   ++ +L  G
Sbjct:   67 LHYAAAEGQIELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKVLLEH-RTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCK-SNKWGCFPIHQAAFSGSKECMEIILRFG 221          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: A0A091CSW5_FUKDA (Transient receptor potential cation channel subfamily A member 1 n=1 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091CSW5_FUKDA)

HSP 1 Score: 75.1 bits (183), Expect = 1.570e-10
Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDSTNNV-NVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKGCDVN 495
            LH AA +GELE +K I+  S+  V NV     +TPLH AA+ NQ E A +L++ GAN  LR +  M PL +A      ++ ++L+E   +T+I+       TA+   C+    +   +L   GA +    +E +  PL LA  S +   V  LL KG  VN
Sbjct:  128 LHHAAAEGELELMKMIISGSSCEVLNVMDNFGNTPLHWAAENNQVESAKFLLTEGANPNLRNSSMMAPLHLAVQGMYNEMTKVLIEH-SSTNINLEGENGNTAVMITCSKDNSEALEIL---GADMNVTDSEGR-SPLVLATASASWNIVNLLLSKGAKVN 283          
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Match: UPI0003315695 (transient receptor potential cation channel subfamily A member 1 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003315695)

HSP 1 Score: 73.2 bits (178), Expect = 6.920e-10
Identity = 52/157 (33.12%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 LHDAAIKGELERVKAILEDST-NNVNVRGPKNHTPLHCAAKGNQPEVASYLISRGANTELRTAFKMTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDCATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKG 483
            LH AA +G+++ ++ I+ DS+   VN+     +TPLH AA  NQ E   +L+S+GAN  LR    M PL +A      +VV++L E    T+++       T++  AC     +   +L+ HGA   K S +    P+H AA SG    ++ +L+ G
Sbjct:   68 LHYAAEEGQIQLMEMIINDSSCETVNMMDNYGNTPLHWAAGKNQVESVKFLLSKGANPNLRNNNMMAPLHLAVQGLHNEVVKVLTEH-SGTNVNLEGENGNTSVLIACARDNSEALQILLKHGAKPCK-SNKWGCFPIHQAAFSGAKNCLEIILKYG 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12679.1987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHX1_ECTSI1.430e-6058.14Ankyrin repeat domain protein n=2 Tax=Ectocarpus T... [more]
A0A0D9RMC7_CHLSB6.390e-1336.31Transient receptor potential cation channel subfam... [more]
TRPA1_MOUSE7.970e-1235.67Transient receptor potential cation channel subfam... [more]
UPI000154AD6D7.980e-1235.67Transient receptor potential cation channel, subfa... [more]
A0A1D5QMT1_MACMU2.450e-1135.03Transient receptor potential cation channel subfam... [more]
A0A2H9SWI5_9BACT3.870e-1132.90Uncharacterized protein n=1 Tax=Parachlamydia sp. ... [more]
A0A7J8C4Q5_ROUAE7.440e-1135.03Transient receptor potential cation channel subfam... [more]
TRPA1_HUMAN7.440e-1133.76Transient receptor potential cation channel subfam... [more]
A0A091CSW5_FUKDA1.570e-1035.40Transient receptor potential cation channel subfam... [more]
UPI00033156956.920e-1033.12transient receptor potential cation channel subfam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12679contigH-elongata_contig12679:4015..7056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score155.2
Seed ortholog evalue2.7e-35
Seed eggNOG ortholog2880.D7FHX1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin-repeat protein
Ec32 orthologEc-12_006210.1
Exons5
Model size1506
Cds size507
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929750.9824758-UTR-H-elongata_contig12679:4014..48061622929750.9824758-UTR-H-elongata_contig12679:4014..4806Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 4015..4806 -
1691679143.3417253-UTR-H-elongata_contig12679:4014..48061691679143.3417253-UTR-H-elongata_contig12679:4014..4806Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 4015..4806 -
1622929751.0396357-UTR-H-elongata_contig12679:5838..59091622929751.0396357-UTR-H-elongata_contig12679:5838..5909Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 5839..5909 -
1691679143.382295-UTR-H-elongata_contig12679:5838..59091691679143.382295-UTR-H-elongata_contig12679:5838..5909Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 5839..5909 -
1622929751.0545268-UTR-H-elongata_contig12679:6098..61261622929751.0545268-UTR-H-elongata_contig12679:6098..6126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 6099..6126 -
1691679143.3987238-UTR-H-elongata_contig12679:6098..61261691679143.3987238-UTR-H-elongata_contig12679:6098..6126Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 6099..6126 -
1622929751.0728915-UTR-H-elongata_contig12679:6948..70561622929751.0728915-UTR-H-elongata_contig12679:6948..7056Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 6949..7056 -
1691679143.4106648-UTR-H-elongata_contig12679:6948..70561691679143.4106648-UTR-H-elongata_contig12679:6948..7056Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12679 6949..7056 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929751.0000422-CDS-H-elongata_contig12679:4806..50871622929751.0000422-CDS-H-elongata_contig12679:4806..5087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 4807..5087 -
1691679143.3505058-CDS-H-elongata_contig12679:4806..50871691679143.3505058-CDS-H-elongata_contig12679:4806..5087Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 4807..5087 -
1622929751.010592-CDS-H-elongata_contig12679:5326..54461622929751.010592-CDS-H-elongata_contig12679:5326..5446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 5327..5446 -
1691679143.357995-CDS-H-elongata_contig12679:5326..54461691679143.357995-CDS-H-elongata_contig12679:5326..5446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 5327..5446 -
1622929751.0212526-CDS-H-elongata_contig12679:5732..58381622929751.0212526-CDS-H-elongata_contig12679:5732..5838Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 5733..5838 -
1691679143.3676877-CDS-H-elongata_contig12679:5732..58381691679143.3676877-CDS-H-elongata_contig12679:5732..5838Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 5733..5838 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12679.1987.1prot_H-elongata_contig12679.1987.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12679 4807..5838 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12679.1987.1

>prot_H-elongata_contig12679.1987.1 ID=prot_H-elongata_contig12679.1987.1|Name=mRNA_H-elongata_contig12679.1987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
MTPLLVASFYGSADVVRLLLEEVKNTDIDALDFGSWTALHYACNYSRGDC
ATLLIDHGASLVKRSAELQLMPLHLAARSGNLGTVKKLLEKGCDVNQRNL
FYTTPLHLACQNDRVEVVRFLLESGAVPDAPDEAGITPSHLTKRDDIAEL
LEKAVTVRKRKALMPPSC*
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mRNA from alignment at H-elongata_contig12679:4015..7056-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12679.1987.1 ID=mRNA_H-elongata_contig12679.1987.1|Name=mRNA_H-elongata_contig12679.1987.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3042bp|location=Sequence derived from alignment at H-elongata_contig12679:4015..7056- (Himanthalia elongata Himel1 dioecious)
CAGGGTAAATACGAGCTGCACGATGCAGCGATCAAGGGCGAACTCGAAAG GGTCAAGGCAATACTGGAGGATTCCACGAATAATGTGAACGTTCGAGGCC CCAAGAACGTGAGAGAAGAAAAGAGAACAAAAGGCCCCTTTCCCGAGAAT GATCCTTAATCCCTATGGAACTCCTCTGTTTTTTAACATACTAAATTCAA TATAAAACATAAAATCCAGTTTCGGAAGGGTTTAGGACAAAAAACGAAAG ACAAAAAAGCTGCATGTCCTCGTGTAGATGGACTGAATGGGACATTTTGT CACATATAATGGTACGGCAGGGTCTAATATTATCCAGCAGGGTGGTGGAT TCCCGGGATCACACCCGTTAAAAAATCGTCAGTCCTGTACCCCCGACCGC TCGAAAAGGACGTGGTGAAGTTGTTGTTGAAGCGGAATCATCATGCCGAC CCTCCGCCCGAGGTATCTATCTATCTCCGAACGATCCCCCAACGGACCGA ACGCAGCGTAAGCAGGCAGTCAGCAATGACATGTAACGGGTACGACAGAT AGCGAGTATGTTTGCATGATGTTGTCTAATCCCTTTCATCAAAAAAGTGT ACAGTAAGAATGCCTCAAATTTACGTTTCACTGGGAGCCGGACTCGGCCT TTCCCAGCAACAAAAAAAACGGCCAGAATTGATACCCCAATGCTGTTGTT GATGAATTTTGACCCACCTGCGGAAGGACGTAAAGAATCCTTACTTTAAG CTGGGCCGTCGGATTTATTTCGGACCCAGTTTTTCTCCATACGATCTGCT ACTATTAATAGCTCATCTTGACCAAACTCGCATGTCTCCCGCACCGGCGT TGCTAACTCCTTTAGTGCCATGCCCTGCGTAACCCGATTCGACTTTTCTG CTTGCCACTTCCTTCTGTGGCAATGTGCAGCACACGCCGTTACACTGCGC CGCAAAAGGTGAGACTTCACCGAGTGACCTCGCGTTTTGGGAGCTGCACT GTATTGAAACTCGACTATATAGGTACCCTCGATGCGGCAGGCTGTCACAG ATGAGAGACATAAACCTTGAGACAAGGGTTACTTCTCTAGGCTTAAGACG GTGAGTTTTTTTTGTCCTATATTTCTCTCTCCTTTGCCCCTCTCAAGGCA ACCAACCTGAGGTGGCCTCTTACCTGATCTCTCGCGGAGCGAATACGGAG TTGCGTACGGCGTTCAAGATGACGCCGCTGCTCGTTGCATCATTCTACGG TAGCGCGGATGTTGTGAGGCTGTTGCTGGAAGAGGTGAAGAATACCGACA TCGACGCGTTAGACTTCGGATCATGTGAGAGCGCGTGTCAGGTCGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTTGATAAGAGTTATGTCA AAAGGTGTCACTGAGCCGAATACCACGCTCACCACCTTCTTTCGAGGTGT TGACTCTTGTCCCTTAAATTATATCGTGGCGCTCTAGCCGACCTGTGGCT TGCTGTCACGGACATACACGCAAAATCATTCTATTTGACGTGCAACGCGC GTTTTTCTAGCTGGGCGCCTTCGAAACGTTTGGCATGCAACGTGTTCTCT TTGCTAGCAGGGACCGCCCTGCATTACGCTTGCAACTACAGCAGGGGCGA CTGCGCAACCCTGCTGATCGATCACGGGGCAAGCTTAGTCAAGAGAAGCG CCGAGCTGCAGCTTATGCCCCTTCACCTCGGTAAGTGCTTGACTTGAGAT ACATCTCCATCCTCTGCGCGTTCGGAAGAATCAAAGCCAGGTCTCGAAAG ATCAGGATGATCGGTAGTTCACCGTTGGATCAGTACTTGCTGTTGGCGCG AGGGAAATAGGGATGACGATCACAGGACGAGAAAACGCTGCACAGAACCA CTCAGTGTCGACGGTTTATCTTTCTCCCCCGGCCTCTTCTTGTCCGTTAA CATCTGACGCGCCCACAAGCCGCCCGCTCCGGGAACCTGGGTACGGTGAA GAAGCTTCTCGAAAAAGGCTGTGATGTAAACCAGCGAAATCTGTTCTACA CGACCCCCCTCCATCTAGCGTGCCAGAACGACAGGGTAGAGGTTGTGCGG TTCCTGCTCGAGAGTGGAGCAGTCCCCGATGCTCCAGACGAGGCCGGGAT TACGCCGTCGCACTTGACCAAGCGCGACGACATCGCGGAGTTACTCGAGA AAGCCGTAACGGTGCGAAAGCGCAAGGCGCTCATGCCCCCCTCGTGTTGA AGTCGTTAAAGTTTCCTGTATTCCAGGGGGGGAGGTTGACTACACTTCGC GGAGTATAAAAACTTCAAGTGGTGCGGCGGATAGCATCCTTGCAAGGGTA GCTTTGGGATTGTAAATTATAGTAAACTTAAACCACCCCGATTTTGGAGG ACAGCGACGACAAATTGGTGCCATCGGCGAAGATCAAAATGTTCACGTCT TGTCGGGATTAACAGGGAGGCGTATGCTACCCTATACGAGACAGACAATA ATCATGGACTATGGAATGACACCGAACTTCTGCATGAAAGGAGTCGTCTG AATTTCGTGTGTAGCACTTGCGATCCATTACGCGTTATTCAGCACCTCTC TGGGTCAGAGTGCGTTTGGGAGCGAAGGCAAAACGACCAGGCGAAGGCAA ACCACAAGCTCAAGAGGTCGCCGATGACGGAACCCCTGCCGCGAACTGCT TTCCTTCAATACAGTGCCGTGTTCGGTTTTGATCTATTTTCGGACATCGA TCCATGTTCTGTCAAATTTTGTTGCCTAATGCGCTTTAGAGTGTGGTTTC TCGGAAGAGGGCATGTGATTGAACCCCTACTCTCATGCACGCTCCCAGCT GTGGTCGTGTCCCCGCGCACTTGAGAGAACGACCGCATCTAGATTGTAAA AACCTATTAACAGACATTTTGTCTCGTACTCTTATCATGGTCGATCCCAC AGACGTCCCAAGAAACTCTTCACAAAATTATTTTTTCGGCATACTTGTAC GATGGGATGCGAGGTAGCTATTAATTGCAGTTTTCACATTTT
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Coding sequence (CDS) from alignment at H-elongata_contig12679:4015..7056-

>mRNA_H-elongata_contig12679.1987.1 ID=mRNA_H-elongata_contig12679.1987.1|Name=mRNA_H-elongata_contig12679.1987.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig12679:4015..7056- (Himanthalia elongata Himel1 dioecious)
ATGACGCCGCTGCTCGTTGCATCATTCTACGGTAGCGCGGATGTTGTGAG
GCTGTTGCTGGAAGAGGTGAAGAATACCGACATCGACGCGTTAGACTTCG
GATCATATGACGCCGCTGCTCGTTGCATCATTCTACGGTAGCGCGGATGT
TGTGAGGCTGTTGCTGGAAGAGGTGAAGAATACCGACATCGACGCGTTAG
ACTTCGGATCATGGACCGCCCTGCATTACGCTTGCAACTACAGCAGGGGC
GACTGCGCAACCCTGCTGATCGATCACGGGGCAAGCTTAGTCAAGAGAAG
CGCCGAGCTGCAGCTTATGCCCCTTCACCTCGGGACCGCCCTGCATTACG
CTTGCAACTACAGCAGGGGCGACTGCGCAACCCTGCTGATCGATCACGGG
GCAAGCTTAGTCAAGAGAAGCGCCGAGCTGCAGCTTATGCCCCTTCACCT
CGCCGCCCGCTCCGGGAACCTGGGTACGGTGAAGAAGCTTCTCGAAAAAG
GCTGTGATGTAAACCAGCGAAATCTGTTCTACACGACCCCCCTCCATCTA
GCGTGCCAGAACGACAGGGTAGAGGTTGTGCGGTTCCTGCTCGAGAGTGG
AGCAGTCCCCGATGCTCCAGACGAGGCCGGGATTACGCCGTCGCACTTGA
CCAAGCGCGACGACATCGCGGAGTTACTCGAGAAAGCCGTAACGGTGCGA
AAGCGCAAGGCGCTCATGCCCCCCTCGTGTTGACCGCCCGCTCCGGGAAC
CTGGGTACGGTGAAGAAGCTTCTCGAAAAAGGCTGTGATGTAAACCAGCG
AAATCTGTTCTACACGACCCCCCTCCATCTAGCGTGCCAGAACGACAGGG
TAGAGGTTGTGCGGTTCCTGCTCGAGAGTGGAGCAGTCCCCGATGCTCCA
GACGAGGCCGGGATTACGCCGTCGCACTTGACCAAGCGCGACGACATCGC
GGAGTTACTCGAGAAAGCCGTAACGGTGCGAAAGCGCAAGGCGCTCATGC
CCCCCTCGTGTTGA
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