mRNA_H-elongata_contig12679.1986.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 6.410e-153 Identity = 267/462 (57.79%), Postives = 319/462 (69.05%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQAR--RRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSG--EGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPTLEVWNKIDKGMS-SPEIDG-------------------NDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALLHL------DSNHRRFAPKPLDRYRYVRVLPGQ 1332
+VV LR +HPK++FG+GK E+ GA+SAADAD VFVNA LSG QQK L W G+TVLDRF VILDIFADRART EAKLQAR LKY+AA LV KG SG+DRQ GG+GT+GGSGEKA++TQR+LLR+RTAEV+RQLKDVERRRGFQR +R+RRLE +VALVGYTNVGKSSL+N+L L RH+ G G EG +R DG MV ARNR+FDTLDPTVRS+TLPSR RCVLVDTVGFIQDLP DLVH+F++TLEE++ AD+LLHVRDASV P V A R+AV ETL E+GA G PTLEVWNK+DK PE G D++L + ++ + R E GEG + R GP D+ AI VSAA+G+GL+ LLER+DA+LHL + + RRF+ KP+DRY YVRVLPGQ
Sbjct: 50 EVVQLRNVHPKFVFGSGKTSEMSGAISAADADTVFVNAPLSGQQQKALSAEWGGATVLDRFAVILDIFADRARTTEAKLQARVVELAMLKYKAAHLV------KGSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGGGNREGKGSERGRRFDGAXX-------XXXXXXMVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGRM-EGPAGEGGSRLSHAGEGRTGPDDEGAIRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQ 497
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI000BAAD054 (GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxID=1590614 RepID=UPI000BAAD054) HSP 1 Score: 216 bits (549), Expect = 8.040e-62 Identity = 139/331 (41.99%), Postives = 188/331 (56.80%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDK 1026
++VPL + P YLFG+GK+DEL + +A+ + V ++ ++ +QQ+ L ++W G +LDR +IL+IFADRART E LQ L Y+ RLV+A + +RQRGG+G VGG GE +E RR + + + RQL V + R R AR + P VALVGYTN GKS+L NRL T E V A++ +F TLDPT+R++TLPS + +L DTVGFI DLP LV AFRATLEE++ ADL+ HVRD S H+ AQ VD L ++G A+ P LE+WNKID+
Sbjct: 54 EIVPLPKVRPGYLFGSGKIDELGERLKSAEIELVLIDGPVTPVQQRNLEKQW-GLKILDRTGLILEIFADRARTREGVLQVEL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRLRRQLSKVVKTRDLHRAARKKVPFPVVALVGYTNAGKSTLFNRL------------TGAE-----------------------------VLAKDMLFATLDPTMRAVTLPSGRQVILSDTVGFISDLPTQLVAAFRATLEEVREADLICHVRDISHPDHM--AQAADVDAILADLGIAEDTPRLELWNKIDQ 332
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI00131BC6D6 (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131BC6D6) HSP 1 Score: 215 bits (547), Expect = 1.580e-61 Identity = 154/404 (38.12%), Postives = 208/404 (51.49%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT--LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERV 1242
+++ LR P LFG G++DE+ V+ D V V+ +L+ +QQ+ L + WN V+DR +IL+IFA RART E KLQ L YE +RLV+ + +RQRGG G +GG GE +E RRLL DR + L+DV R R R AR R PTVALVGYTN GKS+L NRL T G+ V A++ +F TLDPT+R++ LP +L DTVGFI DLP +LV AFRATLEE++ AD++LHVRD S A+ V+ L+++G + P +EVWNK+D+ +PE E+ + R + R G +A+ VSA TGEG LLL R+
Sbjct: 38 EIIQLRTTRPATLFGKGRVDEVGAKVADLDIQVVVVDDALTPVQQRNLEKAWNAK-VMDRTGLILEIFARRARTREGKLQVELAR-LSYERSRLVRTW-------THLERQRGGFGFLGGPGESQIEADRRLLADRMVRLRADLEDVRRTRALHRSARGRVPYPTVALVGYTNAGKSTLFNRL------------TDGQ-----------------------------VLAKDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVESADVILHVRDISSPQSATEAKD--VELVLEQLGIEATPERMIEVWNKLDQ---APE-----------------DEQAALHAR-----------ARRAGESGPEAVAVSALTGEGCDLLLRRI 358
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI0015775C7A (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI0015775C7A) HSP 1 Score: 216 bits (549), Expect = 2.380e-61 Identity = 157/407 (38.57%), Postives = 214/407 (52.58%), Query Frame = 1
Query: 28 RTHQVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT--LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERV 1242
R ++VP+R P LFG+G+++EL V A DA V V+ +L+ +QQ+ L + WN V+DR +IL+IFA RART E KLQ L YE +RLV+ + +RQRGG G +GG GE +E RRLL DR ++ ++L++V R R R AR + PTVALVGYTN GKS+L NRL +G V A++ +F TLDPT+R++ LP +L DTVGFI DLP +LV AFRATLEE+Q AD++LHVRD S +P A+ + V+ L+E+G P +EVWNK+D+ ER G L G + G++ DA+ VSA TGEG LL+ +
Sbjct: 67 RGAEIVPIRTPRPATLFGSGRVEELAAQVRALDASVVVVDDALTPVQQRNLEKAWNAK-VVDRSGLILEIFARRARTKEGKLQVELAR-LSYEKSRLVRTW-------THLERQRGGFGFLGGPGETQIEADRRLLTDRMVKLKKELEEVRRTRTLHRSARQKVPYPTVALVGYTNAGKSTLFNRLT-----------------------------------------EGAVLAQDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVQEADVILHVRDIS-SPETA-AEAKDVETVLEELGIDAHPERMIEVWNKLDQVPQD--------------------ERAG--LEGRARRAHELGSA--------DALPVSALTGEGCEALLQAI 391
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2Z3HQG2_9CAUL (GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=2201350 RepID=A0A2Z3HQG2_9CAUL) HSP 1 Score: 214 bits (544), Expect = 5.490e-61 Identity = 156/407 (38.33%), Postives = 209/407 (51.35%), Query Frame = 1
Query: 40 VVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVP--TLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
+V LR + P LFG+GK++E+ A +AD V V+ SL+ +QQ+ L + W V+DR +IL+IFA RART E +LQ L YE +RLV+ + +RQRGG G +GG GE +ET RRL+ DR + R+L +V R R QR AR R P+VALVGYTN GKS+L NRL SAG V AR+ +F TLDPT+R++ LP VL DTVGFI DLP +LV AFRATLEE++ AD++LHVRD + A A+ V E L+ +G + +EVWNK D+ + + ERR + + AA +LVSA +GEG LL R+ L+
Sbjct: 54 IVNLRRLTPATLFGSGKVEEIAALCEAVEADVVVVDDSLTPVQQRNLEKAWKVK-VIDRTGLILEIFARRARTREGRLQVELAR-LSYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLIADRIGRLKRELDEVRRTRTLQRAARQRAPAPSVALVGYTNAGKSTLFNRL----TSAG-------------------------------------VEARDMLFATLDPTLRTLRLPGGRPVVLSDTVGFISDLPHELVEAFRATLEEVKEADVILHVRDIASADS--DAEAADVREVLQRLGVEMAERRVIEVWNKADR-----------------LDPEARQERRTDAVLARPAA-----------------VLVSAVSGEGCEALLARIAGLI 374
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2T5BTC1_9RHOB (GTPase HflX n=1 Tax=Rhodovulum imhoffii TaxID=365340 RepID=A0A2T5BTC1_9RHOB) HSP 1 Score: 213 bits (542), Expect = 1.050e-60 Identity = 157/407 (38.57%), Postives = 210/407 (51.60%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
++VPL P +LFG GK+++L D + V V+ L+ +QQ+ L W +LDR +IL+IFADRART E LQ L Y+ RLV+A + +RQRGG+G VGG GE +E RR + + A + RQL V + R R AR + PTVALVGYTN GKS+L NRL T E V A++ +F TLDPT+R +TLPS R +L DTVGFI DLP LV AFRATLE++ AD++LHVRD S AP AQ V+ L+++G A+ VP +EVWNK+D ++ V L +T +ER+ ++ +SA TGEG++ LL RV ALL
Sbjct: 54 EIVPLAKTRPGFLFGVGKIEDLAARFGENDIELVLVDGPLTPVQQRNLEHAWKVK-ILDRTGLILEIFADRARTREGVLQVDL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDESIARLRRQLAKVVKTRDLHRAARRKIPFPTVALVGYTNAGKSTLFNRL------------TGAE-----------------------------VMAKDMLFATLDPTMRGLTLPSGQRAILSDTVGFISDLPTQLVAAFRATLEDVLEADVILHVRDIS-APET-DAQARDVEAILQDLGVAEQVPVIEVWNKLD------QVGETRVAL------ETRAERQ------------------------ENVFALSALTGEGIAPLLSRVSALL 372
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2D9VLF9_9RHOB (GTPase HflX n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2D9VLF9_9RHOB) HSP 1 Score: 212 bits (540), Expect = 1.790e-60 Identity = 138/331 (41.69%), Postives = 185/331 (55.89%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDK 1026
+VVPLR +HP +LFGTGKM+EL + AAD + V ++ +S +QQ+ L + W +LDR +IL+IFADRART E LQ L Y+ RLV+A + +RQRGG+G VGG GE +E RR + + + RQL+ V R R R +R + P VALVGYTN GKS+L NRL G V+AK + +F TLDPT+R +TL + + +L DTVGFI DLP LV AFRATLEE+ ADL+LHVRD S AQ++ V + +G ++ P +EVWNK+D+
Sbjct: 56 EVVPLRTVHPGHLFGTGKMEELRLRIKAADVELVLIDGPVSPVQQRNLEKEWKVK-ILDRTGLILEIFADRARTREGVLQVEL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRIRRQLEKVTRTRALHRASRAKVPFPVVALVGYTNAGKSTLFNRLT---------------------------------GADVLAK--------DMLFATLDPTMRGVTLETGQKIILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHGET--EAQKQDVVAIMNTLGVSEETPLIEVWNKLDR 334
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI001FD65D84 (GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivum TaxID=1582356 RepID=UPI001FD65D84) HSP 1 Score: 211 bits (537), Expect = 4.810e-60 Identity = 156/415 (37.59%), Postives = 212/415 (51.08%), Query Frame = 1
Query: 49 LRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQ---GVPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALLHLDSNHRRFA 1284
+R + P L G+G++DE+ A +A D V+ +L+ +QQK L +R + V+DR +IL+IF +RA TAE +LQ L Y+A RLV++ + +RQRGG G +GG GE +E RR++RDR A + ++L+ V++ RG R R R P VALVGYTN GKS+L NRL + V A++ +F TLDPT+RS+ LP + +L DTVGF+ DLP LV AFRATLEE+ ADL+LHVRD S P AQ E V+ L E+G + G P LEVWNK D + SP+ +Y EG R GP + AIL+SA TG+G+ L E V L D N +
Sbjct: 58 VRTLRPGTLLGSGQVDEIAAAAAADDVTLTIVDHTLTPVQQKNLEDRLK-TKVIDRTGLILEIFGERAATAEGRLQVEL-AHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELEQVKKTRGLHRDRRQRAPWPVVALVGYTNAGKSTLFNRLT-----------------------------------------EASVMAKDLLFATLDPTMRSVKLPGHEKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDIS-HPDT-EAQAEDVEGVLAELGLEEGKGPPRLEVWNKAD--LLSPD----------------------DYATLEG----------RAGP--RGAILISAGTGQGVEHLREVVGQALDPDRNRHEIS 384
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: F1Z9Y5_9SPHN (GTPase HflX n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 TaxID=983920 RepID=F1Z9Y5_9SPHN) HSP 1 Score: 211 bits (538), Expect = 5.480e-60 Identity = 151/410 (36.83%), Postives = 214/410 (52.20%), Query Frame = 1
Query: 40 VVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQG-----VPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
++P+RA+ P LFG G++D++ A +DA+ V V+ +LS +QQ+ L +R V+DR +IL+IF +RA TAE +LQ L Y+A RLV++ + +RQRGG G +GG GE +E RRL+R R A + R+L+ V R RG R R R P +ALVGYTN GKS+L NRL G T V A + +F TLDPT+R+I LP + +L DTVGFI DLP LV AFRATLEE+ AD+++HVRD VA Q+ V++ L ++G G +P +E WNKID + +P+ + L D+ + G D+ + +SAATGEG+ L+ER+ +L
Sbjct: 63 ILPIRAVRPATLFGEGQVDKIAVACEQSDAELVIVDGALSAIQQRNLEDRLKRK-VIDRTGLILEIFGERAATAEGRLQVEL-AHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRLIRGRMARIRRELEQVRRTRGLHRERRQRAPWPIIALVGYTNAGKSTLFNRL---------TGAT--------------------------------VMAEDLLFATLDPTMRAIRLPGVDKAILSDTVGFISDLPTQLVAAFRATLEEVTAADVIVHVRD--VANPASAQQKREVEDILTDLGVIGEEGTSIPIVEAWNKID--LLAPD----ERALREDLITH--------------------------GVPDRPVVPISAATGEGVDALVERLGTML 388
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI001E38ED03 (GTPase HflX n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI001E38ED03) HSP 1 Score: 211 bits (536), Expect = 5.800e-60 Identity = 152/409 (37.16%), Postives = 204/409 (49.88%), Query Frame = 1
Query: 37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT---LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
++VPL+ I P L G GK+++L V +A+ V V+A LS +QQ+ L + W+ VLDR +IL+IF RART E +LQ L+Y+ RLV++ + +RQRGG G +GG GE +E RR++ +R A + RQL+ V R RG R AR R P +AL GYTN GKS+L NRL + VHA +++F TLDPT+R + LP +L DTVGFI DLP LV AFRATLEE+ AD++LHVRD S P AQ V+ L E+G +EVWNK D ++ ER + EGA ++VSA TGEG+ LL R++ALL
Sbjct: 39 EIVPLQRITPATLIGAGKVEDLSARVREKEAELVIVDAHLSPVQQRNLEKAWDAK-VLDRTGLILEIFGRRARTKEGRLQVEL-AHLEYQKTRLVRSW-------THLERQRGGFGFMGGPGETQIEADRRIISERIARLRRQLEQVARTRGLHRKARRRVPYPVIALAGYTNAGKSTLFNRLARAE-----------------------------------------VHAADQLFATLDPTLRRVRLPHGREVILSDTVGFISDLPTTLVAAFRATLEEVVEADVILHVRDMS-DPEEAEAQAADVEGVLAELGIDEERRGRMIEVWNKAD------------------LWDPALRERLRQQAEREGA------------------VIVSARTGEGIPDLLARIEALL 360 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12679.1986.1 >prot_H-elongata_contig12679.1986.1 ID=prot_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=446bp MFPPQLGGARTHQVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNAback to top mRNA from alignment at H-elongata_contig12679:1385..3440+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12679.1986.1 ID=mRNA_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2056bp|location=Sequence derived from alignment at H-elongata_contig12679:1385..3440+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12679:1385..3440+ >mRNA_H-elongata_contig12679.1986.1 ID=mRNA_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2676bp|location=Sequence derived from alignment at H-elongata_contig12679:1385..3440+ (Himanthalia elongata Himel1 dioecious)back to top |