mRNA_H-elongata_contig12679.1986.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12679.1986.1
Unique NamemRNA_H-elongata_contig12679.1986.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE)

HSP 1 Score: 452 bits (1163), Expect = 6.410e-153
Identity = 267/462 (57.79%), Postives = 319/462 (69.05%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQAR--RRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSG--EGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPTLEVWNKIDKGMS-SPEIDG-------------------NDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALLHL------DSNHRRFAPKPLDRYRYVRVLPGQ 1332
            +VV LR +HPK++FG+GK  E+ GA+SAADAD VFVNA LSG QQK L   W G+TVLDRF VILDIFADRART EAKLQAR      LKY+AA LV      KG  SG+DRQ GG+GT+GGSGEKA++TQR+LLR+RTAEV+RQLKDVERRRGFQR +R+RRLE +VALVGYTNVGKSSL+N+L L RH+    G   G  EG      +R DG                MV ARNR+FDTLDPTVRS+TLPSR RCVLVDTVGFIQDLP DLVH+F++TLEE++ AD+LLHVRDASV P V  A R+AV ETL E+GA G PTLEVWNK+DK     PE  G                    D++L  +  ++  + R  E   GEG +        R GP D+ AI VSAA+G+GL+ LLER+DA+LHL      + + RRF+ KP+DRY YVRVLPGQ
Sbjct:   50 EVVQLRNVHPKFVFGSGKTSEMSGAISAADADTVFVNAPLSGQQQKALSAEWGGATVLDRFAVILDIFADRARTTEAKLQARVVELAMLKYKAAHLV------KGSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGGGNREGKGSERGRRFDGAXX-------XXXXXXMVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGRM-EGPAGEGGSRLSHAGEGRTGPDDEGAIRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQ 497          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI000BAAD054 (GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxID=1590614 RepID=UPI000BAAD054)

HSP 1 Score: 216 bits (549), Expect = 8.040e-62
Identity = 139/331 (41.99%), Postives = 188/331 (56.80%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDK 1026
            ++VPL  + P YLFG+GK+DEL   + +A+ + V ++  ++ +QQ+ L ++W G  +LDR  +IL+IFADRART E  LQ      L Y+  RLV+A        +  +RQRGG+G VGG GE  +E  RR + +    + RQL  V + R   R AR +   P VALVGYTN GKS+L NRL            T  E                             V A++ +F TLDPT+R++TLPS  + +L DTVGFI DLP  LV AFRATLEE++ ADL+ HVRD S   H+  AQ   VD  L ++G A+  P LE+WNKID+
Sbjct:   54 EIVPLPKVRPGYLFGSGKIDELGERLKSAEIELVLIDGPVTPVQQRNLEKQW-GLKILDRTGLILEIFADRARTREGVLQVEL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRLRRQLSKVVKTRDLHRAARKKVPFPVVALVGYTNAGKSTLFNRL------------TGAE-----------------------------VLAKDMLFATLDPTMRAVTLPSGRQVILSDTVGFISDLPTQLVAAFRATLEEVREADLICHVRDISHPDHM--AQAADVDAILADLGIAEDTPRLELWNKIDQ 332          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI00131BC6D6 (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131BC6D6)

HSP 1 Score: 215 bits (547), Expect = 1.580e-61
Identity = 154/404 (38.12%), Postives = 208/404 (51.49%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT--LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERV 1242
            +++ LR   P  LFG G++DE+   V+  D   V V+ +L+ +QQ+ L + WN   V+DR  +IL+IFA RART E KLQ      L YE +RLV+         +  +RQRGG G +GG GE  +E  RRLL DR   +   L+DV R R   R AR R   PTVALVGYTN GKS+L NRL            T G+                             V A++ +F TLDPT+R++ LP     +L DTVGFI DLP +LV AFRATLEE++ AD++LHVRD S       A+   V+  L+++G +  P   +EVWNK+D+   +PE                  E+   + R           + R G    +A+ VSA TGEG  LLL R+
Sbjct:   38 EIIQLRTTRPATLFGKGRVDEVGAKVADLDIQVVVVDDALTPVQQRNLEKAWNAK-VMDRTGLILEIFARRARTREGKLQVELAR-LSYERSRLVRTW-------THLERQRGGFGFLGGPGESQIEADRRLLADRMVRLRADLEDVRRTRALHRSARGRVPYPTVALVGYTNAGKSTLFNRL------------TDGQ-----------------------------VLAKDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVESADVILHVRDISSPQSATEAKD--VELVLEQLGIEATPERMIEVWNKLDQ---APE-----------------DEQAALHAR-----------ARRAGESGPEAVAVSALTGEGCDLLLRRI 358          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI0015775C7A (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI0015775C7A)

HSP 1 Score: 216 bits (549), Expect = 2.380e-61
Identity = 157/407 (38.57%), Postives = 214/407 (52.58%), Query Frame = 1
Query:   28 RTHQVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT--LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERV 1242
            R  ++VP+R   P  LFG+G+++EL   V A DA  V V+ +L+ +QQ+ L + WN   V+DR  +IL+IFA RART E KLQ      L YE +RLV+         +  +RQRGG G +GG GE  +E  RRLL DR  ++ ++L++V R R   R AR +   PTVALVGYTN GKS+L NRL                                          +G V A++ +F TLDPT+R++ LP     +L DTVGFI DLP +LV AFRATLEE+Q AD++LHVRD S +P    A+ + V+  L+E+G    P   +EVWNK+D+                        ER G  L G      + G++        DA+ VSA TGEG   LL+ +
Sbjct:   67 RGAEIVPIRTPRPATLFGSGRVEELAAQVRALDASVVVVDDALTPVQQRNLEKAWNAK-VVDRSGLILEIFARRARTKEGKLQVELAR-LSYEKSRLVRTW-------THLERQRGGFGFLGGPGETQIEADRRLLTDRMVKLKKELEEVRRTRTLHRSARQKVPYPTVALVGYTNAGKSTLFNRLT-----------------------------------------EGAVLAQDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVQEADVILHVRDIS-SPETA-AEAKDVETVLEELGIDAHPERMIEVWNKLDQVPQD--------------------ERAG--LEGRARRAHELGSA--------DALPVSALTGEGCEALLQAI 391          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2Z3HQG2_9CAUL (GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=2201350 RepID=A0A2Z3HQG2_9CAUL)

HSP 1 Score: 214 bits (544), Expect = 5.490e-61
Identity = 156/407 (38.33%), Postives = 209/407 (51.35%), Query Frame = 1
Query:   40 VVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVP--TLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
            +V LR + P  LFG+GK++E+     A +AD V V+ SL+ +QQ+ L + W    V+DR  +IL+IFA RART E +LQ      L YE +RLV+         +  +RQRGG G +GG GE  +ET RRL+ DR   + R+L +V R R  QR AR R   P+VALVGYTN GKS+L NRL     SAG                                     V AR+ +F TLDPT+R++ LP     VL DTVGFI DLP +LV AFRATLEE++ AD++LHVRD + A     A+   V E L+ +G +      +EVWNK D+                 +  +   ERR + +    AA                 +LVSA +GEG   LL R+  L+
Sbjct:   54 IVNLRRLTPATLFGSGKVEEIAALCEAVEADVVVVDDSLTPVQQRNLEKAWKVK-VIDRTGLILEIFARRARTREGRLQVELAR-LSYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLIADRIGRLKRELDEVRRTRTLQRAARQRAPAPSVALVGYTNAGKSTLFNRL----TSAG-------------------------------------VEARDMLFATLDPTLRTLRLPGGRPVVLSDTVGFISDLPHELVEAFRATLEEVKEADVILHVRDIASADS--DAEAADVREVLQRLGVEMAERRVIEVWNKADR-----------------LDPEARQERRTDAVLARPAA-----------------VLVSAVSGEGCEALLARIAGLI 374          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2T5BTC1_9RHOB (GTPase HflX n=1 Tax=Rhodovulum imhoffii TaxID=365340 RepID=A0A2T5BTC1_9RHOB)

HSP 1 Score: 213 bits (542), Expect = 1.050e-60
Identity = 157/407 (38.57%), Postives = 210/407 (51.60%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
            ++VPL    P +LFG GK+++L       D + V V+  L+ +QQ+ L   W    +LDR  +IL+IFADRART E  LQ      L Y+  RLV+A        +  +RQRGG+G VGG GE  +E  RR + +  A + RQL  V + R   R AR +   PTVALVGYTN GKS+L NRL            T  E                             V A++ +F TLDPT+R +TLPS  R +L DTVGFI DLP  LV AFRATLE++  AD++LHVRD S AP    AQ   V+  L+++G A+ VP +EVWNK+D      ++    V L      +T +ER+                        ++   +SA TGEG++ LL RV ALL
Sbjct:   54 EIVPLAKTRPGFLFGVGKIEDLAARFGENDIELVLVDGPLTPVQQRNLEHAWKVK-ILDRTGLILEIFADRARTREGVLQVDL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDESIARLRRQLAKVVKTRDLHRAARRKIPFPTVALVGYTNAGKSTLFNRL------------TGAE-----------------------------VMAKDMLFATLDPTMRGLTLPSGQRAILSDTVGFISDLPTQLVAAFRATLEDVLEADVILHVRDIS-APET-DAQARDVEAILQDLGVAEQVPVIEVWNKLD------QVGETRVAL------ETRAERQ------------------------ENVFALSALTGEGIAPLLSRVSALL 372          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: A0A2D9VLF9_9RHOB (GTPase HflX n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A2D9VLF9_9RHOB)

HSP 1 Score: 212 bits (540), Expect = 1.790e-60
Identity = 138/331 (41.69%), Postives = 185/331 (55.89%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIG-AQGVPTLEVWNKIDK 1026
            +VVPLR +HP +LFGTGKM+EL   + AAD + V ++  +S +QQ+ L + W    +LDR  +IL+IFADRART E  LQ      L Y+  RLV+A        +  +RQRGG+G VGG GE  +E  RR + +    + RQL+ V R R   R +R +   P VALVGYTN GKS+L NRL                                  G  V+AK        + +F TLDPT+R +TL +  + +L DTVGFI DLP  LV AFRATLEE+  ADL+LHVRD S       AQ++ V   +  +G ++  P +EVWNK+D+
Sbjct:   56 EVVPLRTVHPGHLFGTGKMEELRLRIKAADVELVLIDGPVSPVQQRNLEKEWKVK-ILDRTGLILEIFADRARTREGVLQVEL-AALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRIRRQLEKVTRTRALHRASRAKVPFPVVALVGYTNAGKSTLFNRLT---------------------------------GADVLAK--------DMLFATLDPTMRGVTLETGQKIILSDTVGFISDLPTQLVAAFRATLEEVLEADLILHVRDISHGET--EAQKQDVVAIMNTLGVSEETPLIEVWNKLDR 334          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI001FD65D84 (GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivum TaxID=1582356 RepID=UPI001FD65D84)

HSP 1 Score: 211 bits (537), Expect = 4.810e-60
Identity = 156/415 (37.59%), Postives = 212/415 (51.08%), Query Frame = 1
Query:   49 LRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQ---GVPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALLHLDSNHRRFA 1284
            +R + P  L G+G++DE+  A +A D     V+ +L+ +QQK L +R   + V+DR  +IL+IF +RA TAE +LQ      L Y+A RLV++        +  +RQRGG G +GG GE  +E  RR++RDR A + ++L+ V++ RG  R  R R   P VALVGYTN GKS+L NRL                                          +  V A++ +F TLDPT+RS+ LP   + +L DTVGF+ DLP  LV AFRATLEE+  ADL+LHVRD S  P    AQ E V+  L E+G +   G P LEVWNK D  + SP+                      +Y   EG          R GP  + AIL+SA TG+G+  L E V   L  D N    +
Sbjct:   58 VRTLRPGTLLGSGQVDEIAAAAAADDVTLTIVDHTLTPVQQKNLEDRLK-TKVIDRTGLILEIFGERAATAEGRLQVEL-AHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELEQVKKTRGLHRDRRQRAPWPVVALVGYTNAGKSTLFNRLT-----------------------------------------EASVMAKDLLFATLDPTMRSVKLPGHEKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDIS-HPDT-EAQAEDVEGVLAELGLEEGKGPPRLEVWNKAD--LLSPD----------------------DYATLEG----------RAGP--RGAILISAGTGQGVEHLREVVGQALDPDRNRHEIS 384          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: F1Z9Y5_9SPHN (GTPase HflX n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 TaxID=983920 RepID=F1Z9Y5_9SPHN)

HSP 1 Score: 211 bits (538), Expect = 5.480e-60
Identity = 151/410 (36.83%), Postives = 214/410 (52.20%), Query Frame = 1
Query:   40 VVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQG-----VPTLEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
            ++P+RA+ P  LFG G++D++  A   +DA+ V V+ +LS +QQ+ L +R     V+DR  +IL+IF +RA TAE +LQ      L Y+A RLV++        +  +RQRGG G +GG GE  +E  RRL+R R A + R+L+ V R RG  R  R R   P +ALVGYTN GKS+L NRL          G T                                V A + +F TLDPT+R+I LP   + +L DTVGFI DLP  LV AFRATLEE+  AD+++HVRD  VA      Q+  V++ L ++G  G     +P +E WNKID  + +P+    +  L  D+ +                           G  D+  + +SAATGEG+  L+ER+  +L
Sbjct:   63 ILPIRAVRPATLFGEGQVDKIAVACEQSDAELVIVDGALSAIQQRNLEDRLKRK-VIDRTGLILEIFGERAATAEGRLQVEL-AHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRLIRGRMARIRRELEQVRRTRGLHRERRQRAPWPIIALVGYTNAGKSTLFNRL---------TGAT--------------------------------VMAEDLLFATLDPTMRAIRLPGVDKAILSDTVGFISDLPTQLVAAFRATLEEVTAADVIVHVRD--VANPASAQQKREVEDILTDLGVIGEEGTSIPIVEAWNKID--LLAPD----ERALREDLITH--------------------------GVPDRPVVPISAATGEGVDALVERLGTML 388          
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Match: UPI001E38ED03 (GTPase HflX n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI001E38ED03)

HSP 1 Score: 211 bits (536), Expect = 5.800e-60
Identity = 152/409 (37.16%), Postives = 204/409 (49.88%), Query Frame = 1
Query:   37 QVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNASLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLKYEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRHSAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDTLDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLLHVRDASVAPHVYHAQREAVDETLKEIGAQGVPT---LEVWNKIDKGMSSPEIDGNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVSAATGEGLSLLLERVDALL 1254
            ++VPL+ I P  L G GK+++L   V   +A+ V V+A LS +QQ+ L + W+   VLDR  +IL+IF  RART E +LQ      L+Y+  RLV++        +  +RQRGG G +GG GE  +E  RR++ +R A + RQL+ V R RG  R AR R   P +AL GYTN GKS+L NRL  +                                          VHA +++F TLDPT+R + LP     +L DTVGFI DLP  LV AFRATLEE+  AD++LHVRD S  P    AQ   V+  L E+G         +EVWNK D                  ++     ER  +    EGA                  ++VSA TGEG+  LL R++ALL
Sbjct:   39 EIVPLQRITPATLIGAGKVEDLSARVREKEAELVIVDAHLSPVQQRNLEKAWDAK-VLDRTGLILEIFGRRARTKEGRLQVEL-AHLEYQKTRLVRSW-------THLERQRGGFGFMGGPGETQIEADRRIISERIARLRRQLEQVARTRGLHRKARRRVPYPVIALAGYTNAGKSTLFNRLARAE-----------------------------------------VHAADQLFATLDPTLRRVRLPHGREVILSDTVGFISDLPTTLVAAFRATLEEVVEADVILHVRDMS-DPEEAEAQAADVEGVLAELGIDEERRGRMIEVWNKAD------------------LWDPALRERLRQQAEREGA------------------VIVSARTGEGIPDLLARIEALL 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12679.1986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZG8_9PHAE6.410e-15357.79Hflx-type G domain-containing protein n=2 Tax=Ecto... [more]
UPI000BAAD0548.040e-6241.99GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxI... [more]
UPI00131BC6D61.580e-6138.12GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641... [more]
UPI0015775C7A2.380e-6138.57GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641... [more]
A0A2Z3HQG2_9CAUL5.490e-6138.33GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=... [more]
A0A2T5BTC1_9RHOB1.050e-6038.57GTPase HflX n=1 Tax=Rhodovulum imhoffii TaxID=3653... [more]
A0A2D9VLF9_9RHOB1.790e-6041.69GTPase HflX n=2 Tax=Rhodobacterales TaxID=204455 R... [more]
UPI001FD65D844.810e-6037.59GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivu... [more]
F1Z9Y5_9SPHN5.480e-6036.83GTPase HflX n=1 Tax=Novosphingobium nitrogenifigen... [more]
UPI001E38ED035.800e-6037.16GTPase HflX n=1 Tax=Thermopetrobacter sp. TC1 TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12679contigH-elongata_contig12679:1385..3440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.5
Seed ortholog evalue5.4e-128
Seed eggNOG ortholog2880.D7FHX0
EggNOG free text desc.ribosome binding
EggNOG OGsCOG2262@1,KOG0410@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMHflX, mitochondrial HflX GTPase
Ec32 orthologEc-12_006200.1
Exons4
Model size1338
Cds size1338
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12679.1986.1prot_H-elongata_contig12679.1986.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12679 1385..3440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929750.9034898-CDS-H-elongata_contig12679:1384..16761622929750.9034898-CDS-H-elongata_contig12679:1384..1676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 1385..1676 +
1691679143.302527-CDS-H-elongata_contig12679:1384..16761691679143.302527-CDS-H-elongata_contig12679:1384..1676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 1385..1676 +
1622929750.9146972-CDS-H-elongata_contig12679:1899..24011622929750.9146972-CDS-H-elongata_contig12679:1899..2401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 1900..2401 +
1691679143.3127956-CDS-H-elongata_contig12679:1899..24011691679143.3127956-CDS-H-elongata_contig12679:1899..2401Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 1900..2401 +
1622929750.9297678-CDS-H-elongata_contig12679:2725..30721622929750.9297678-CDS-H-elongata_contig12679:2725..3072Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 2726..3072 +
1691679143.3215284-CDS-H-elongata_contig12679:2725..30721691679143.3215284-CDS-H-elongata_contig12679:2725..3072Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 2726..3072 +
1622929750.9462876-CDS-H-elongata_contig12679:3243..34401622929750.9462876-CDS-H-elongata_contig12679:3243..3440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 3244..3440 +
1691679143.330493-CDS-H-elongata_contig12679:3243..34401691679143.330493-CDS-H-elongata_contig12679:3243..3440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12679 3244..3440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12679.1986.1

>prot_H-elongata_contig12679.1986.1 ID=prot_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=446bp
MFPPQLGGARTHQVVPLRAIHPKYLFGTGKMDELWGAVSAADADAVFVNA
SLSGMQQKGLVERWNGSTVLDRFRVILDIFADRARTAEAKLQARRRLGLK
YEAARLVQAGGAGKGRDSGYDRQRGGMGTVGGSGEKALETQRRLLRDRTA
EVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNRLGLSRH
SAGYFGETSGEGAWESGVKRGDGIPYKPGGRGVVAKGKGMVHARNRIFDT
LDPTVRSITLPSRARCVLVDTVGFIQDLPADLVHAFRATLEELQRADLLL
HVRDASVAPHVYHAQREAVDETLKEIGAQGVPTLEVWNKIDKGMSSPEID
GNDVTLSGDVYSKTTSERRGEYLRGEGAAPGDSGTSNRGGPLDKDAILVS
AATGEGLSLLLERVDALLHLDSNHRRFAPKPLDRYRYVRVLPGQP*
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mRNA from alignment at H-elongata_contig12679:1385..3440+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12679.1986.1 ID=mRNA_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2056bp|location=Sequence derived from alignment at H-elongata_contig12679:1385..3440+ (Himanthalia elongata Himel1 dioecious)
ATGTTCCCACCACAACTCGGAGGCGCGCGTACGCATCAGGTAGTACCTCT TCGTGCCATACACCCCAAATATCTCTTTGGAACCGGGAAGATGGACGAGC TGTGGGGAGCCGTGAGTGCCGCCGATGCCGACGCGGTATTCGTTAACGCT TCCCTGTCCGGCATGCAGCAGAAGGGGCTCGTCGAACGGTGGAACGGTTC GACCGTGCTCGACCGGTTCCGGGTAATTTTGGACATCTTTGCCGACAGAG CCAGGACGGCCGAGGCTAAGCTGCAGGCGAGAAGACGTCTGGGTTTTTTT TTCAGACGTACTCTTATTCCTCGACGAGGGGGAGGTTGGGGGGTCGTTTG CAGTTCACAGCCCTCGGCATTGGCAATGACGATTAATTATCAGACCAAAG ATTGCATCCGTTTGGAGGAGTCCTGGCCTATGCGCCGCCTCTTCAAAGTA CCTTAGGTCAGCTCGGACCCAATCCTTACCCAGGTGATTCTCTTGTACGC AGGTAGAACTCGCAGGACTGAAATATGAGGCAGCACGCCTCGTGCAAGCT GGAGGCGCCGGTAAGGGTCGCGACAGCGGTTACGATCGGCAGCGCGGCGG GATGGGGACGGTAGGAGGTTCGGGCGAGAAGGCCCTGGAGACACAGCGCC GCCTGCTGCGAGACCGCACCGCCGAGGTCAACCGGCAACTCAAGGACGTC GAGCGCCGACGGGGCTTCCAGCGGGGCGCCCGCAATCGAAGACTAGAGCC GACCGTGGCGCTCGTGGGCTACACAAACGTCGGAAAGTCTTCACTCTTGA ACCGACTTGGGCTGTCAAGGCATAGTGCCGGTTACTTCGGCGAGACGAGT GGGGAGGGGGCATGGGAATCGGGGGTGAAGAGGGGGGACGGAATCCCTTA CAAGCCAGGCGGTCGAGGAGTGGTTGCAAAGGGCAAGGGCATGGTGCACG CTCGTAATCGTATATTCGATACCCTGGATCCGACCGTACGGTCCATCACG CTACCGTCGCGCGCAAGGTAATTTTGCGTTCCGTTGAACTTTCGGCGCGC TGGTGGATGGCGTTCAAAGATGTTACGGTGCTTCGGGCCCCCCAGAAGCT CAAATGACCCTGAACTACTTTCTGGAGTTTTCGCAACGGTCGTTTCATAC CCTTGTGGTTCCCCAAAGCTAAATGTGCGGACGTGACGTGGACACCTTTC TCCATTGTCTTTGGTTCTACGCAGGTAGGTGGTGAAGGTGTCGGTACGAT ACCACTACTGCTGTTGAAAGCCTCGAGATGTCGCGCAAATCGAATCTCCA ATCCTGCCACCCTACACCGTTCCATTACGTTTCCGAAACAGGTGCGTGCT GGTGGACACCGTGGGTTTCATTCAGGACCTGCCGGCAGACCTGGTGCATG CCTTCCGAGCCACCCTCGAGGAGTTGCAACGCGCGGACCTTCTCCTGCAC GTTCGCGATGCCAGCGTTGCGCCTCACGTGTACCACGCGCAGCGCGAAGC CGTAGATGAGACCTTGAAAGAGATCGGGGCCCAGGGCGTGCCGACGCTCG AGGTCTGGAACAAAATAGACAAGGGCATGTCGTCTCCAGAGATCGATGGA AATGATGTGACGCTCTCCGGGGATGTATATTCAAAGACCACTAGTGAACG GCGTGGAGAATATCTAAGAGGGGAGGGGGCTGCGCCGGGTGACATGACTT TCCCCAATGAGGTCTTGGGAGCGGCGAGTATAAGGCACGAGGCAGAGAGC GAGATATATTGGTCACAAATCACAGACCCAGATATTCTTATCAAAAGAAG AGGTCCGAACGAGAGATGCCAAGCGAAGACGCAGACTTTAGCAGAAGACG TAACGCCAGGTGACTCGGGTACGTCAAACAGAGGCGGACCATTGGACAAA GACGCTATTCTAGTGTCCGCCGCAACAGGGGAAGGCCTGAGCCTTCTGCT AGAGCGTGTGGACGCGCTCTTGCACCTGGACTCAAACCATCGGCGGTTCG CCCCCAAGCCACTCGATCGGTATCGGTACGTCCGGGTTCTGCCCGGACAG CCGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig12679:1385..3440+

>mRNA_H-elongata_contig12679.1986.1 ID=mRNA_H-elongata_contig12679.1986.1|Name=mRNA_H-elongata_contig12679.1986.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2676bp|location=Sequence derived from alignment at H-elongata_contig12679:1385..3440+ (Himanthalia elongata Himel1 dioecious)
ATGTTCCCACCACAACTCGGAGGCGCGCGTACGCATCAGGTAGTACCTCT
TCGTGCCATACACCCCAAATATCTCTTTGGAACCGGGAAGATGGACGAGC
TGTGGGGAGCCGTGAGTGCCGCCGATGCCGACGCGGTATTCGTTAACGCT
TCCCTGTCCGGCATGCAGCAGAAGGGGCTCGTCGAACGGTGGAACGGTTC
GACCGTGCTCGACCGGTTCCGGGTAATTTTGGACATCTTTGCCGACAGAG
CCAGGACGGCCGAGGCTAAGCTGCAGGCGAGAAGACGTCTGGATGTTCCC
ACCACAACTCGGAGGCGCGCGTACGCATCAGGTAGTACCTCTTCGTGCCA
TACACCCCAAATATCTCTTTGGAACCGGGAAGATGGACGAGCTGTGGGGA
GCCGTGAGTGCCGCCGATGCCGACGCGGTATTCGTTAACGCTTCCCTGTC
CGGCATGCAGCAGAAGGGGCTCGTCGAACGGTGGAACGGTTCGACCGTGC
TCGACCGGTTCCGGGTAATTTTGGACATCTTTGCCGACAGAGCCAGGACG
GCCGAGGCTAAGCTGCAGGCGAGAAGACGTCTGGGACTGAAATATGAGGC
AGCACGCCTCGTGCAAGCTGGAGGCGCCGGTAAGGGTCGCGACAGCGGTT
ACGATCGGCAGCGCGGCGGGATGGGGACGGTAGGAGGTTCGGGCGAGAAG
GCCCTGGAGACACAGCGCCGCCTGCTGCGAGACCGCACCGCCGAGGTCAA
CCGGCAACTCAAGGACGTCGAGCGCCGACGGGGCTTCCAGCGGGGCGCCC
GCAATCGAAGACTAGAGCCGACCGTGGCGCTCGTGGGCTACACAAACGTC
GGAAAGTCTTCACTCTTGAACCGACTTGGGCTGTCAAGGCATAGTGCCGG
TTACTTCGGCGAGACGAGTGGGGAGGGGGCATGGGAATCGGGGGTGAAGA
GGGGGGACGGAATCCCTTACAAGCCAGGCGGTCGAGGAGTGGTTGCAAAG
GGCAAGGGCATGGTGCACGCTCGTAATCGTATATTCGATACCCTGGATCC
GACCGTACGGTCCATCACGCTACCGTCGCGCGCAAGGACTGAAATATGAG
GCAGCACGCCTCGTGCAAGCTGGAGGCGCCGGTAAGGGTCGCGACAGCGG
TTACGATCGGCAGCGCGGCGGGATGGGGACGGTAGGAGGTTCGGGCGAGA
AGGCCCTGGAGACACAGCGCCGCCTGCTGCGAGACCGCACCGCCGAGGTC
AACCGGCAACTCAAGGACGTCGAGCGCCGACGGGGCTTCCAGCGGGGCGC
CCGCAATCGAAGACTAGAGCCGACCGTGGCGCTCGTGGGCTACACAAACG
TCGGAAAGTCTTCACTCTTGAACCGACTTGGGCTGTCAAGGCATAGTGCC
GGTTACTTCGGCGAGACGAGTGGGGAGGGGGCATGGGAATCGGGGGTGAA
GAGGGGGGACGGAATCCCTTACAAGCCAGGCGGTCGAGGAGTGGTTGCAA
AGGGCAAGGGCATGGTGCACGCTCGTAATCGTATATTCGATACCCTGGAT
CCGACCGTACGGTCCATCACGCTACCGTCGCGCGCAAGGTGCGTGCTGGT
GGACACCGTGGGTTTCATTCAGGACCTGCCGGCAGACCTGGTGCATGCCT
TCCGAGCCACCCTCGAGGAGTTGCAACGCGCGGACCTTCTCCTGCACGTT
CGCGATGCCAGCGTTGCGCCTCACGTGTACCACGCGCAGCGCGAAGCCGT
AGATGAGACCTTGAAAGAGATCGGGGCCCAGGGCGTGCCGACGCTCGAGG
TCTGGAACAAAATAGACAAGGGCATGTCGTCTCCAGAGATCGATGGAAAT
GATGTGACGCTCTCCGGGGATGTATATTCAAAGACCACTAGTGAACGGCG
TGGAGAATATCTAAGAGGGGAGGGGGCTGCGCCGGGTGCGTGCTGGTGGA
CACCGTGGGTTTCATTCAGGACCTGCCGGCAGACCTGGTGCATGCCTTCC
GAGCCACCCTCGAGGAGTTGCAACGCGCGGACCTTCTCCTGCACGTTCGC
GATGCCAGCGTTGCGCCTCACGTGTACCACGCGCAGCGCGAAGCCGTAGA
TGAGACCTTGAAAGAGATCGGGGCCCAGGGCGTGCCGACGCTCGAGGTCT
GGAACAAAATAGACAAGGGCATGTCGTCTCCAGAGATCGATGGAAATGAT
GTGACGCTCTCCGGGGATGTATATTCAAAGACCACTAGTGAACGGCGTGG
AGAATATCTAAGAGGGGAGGGGGCTGCGCCGGGTGACTCGGGTACGTCAA
ACAGAGGCGGACCATTGGACAAAGACGCTATTCTAGTGTCCGCCGCAACA
GGGGAAGGCCTGAGCCTTCTGCTAGAGCGTGTGGACGCGCTCTTGCACCT
GGACTCAAACCATCGGCGGTTCGCCCCCAAGCCACTCGATCGGTATCGGT
ACGTCCGGGTTCTGCCCGGACAGCCGTAGGTGACTCGGGTACGTCAAACA
GAGGCGGACCATTGGACAAAGACGCTATTCTAGTGTCCGCCGCAACAGGG
GAAGGCCTGAGCCTTCTGCTAGAGCGTGTGGACGCGCTCTTGCACCTGGA
CTCAAACCATCGGCGGTTCGCCCCCAAGCCACTCGATCGGTATCGGTACG
TCCGGGTTCTGCCCGGACAGCCGTAG
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