prot_H-elongata_contig126631.1980.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126631.1980.1
Unique Nameprot_H-elongata_contig126631.1980.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length116
Homology
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BLAST of mRNA_H-elongata_contig126631.1980.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 3.120e-47
Identity = 94/117 (80.34%), Postives = 102/117 (87.18%), Query Frame = 0 
Query:    1 QYLPPGTCKLLVGHKADLPAYVVNDEALSLYVALASGFRGWCLTVGSSEYGDYDVAARRGG---ATAEGGGRYKGQSLSGEKQLSVSEAMRTLLGHIFRTGGVG-GASGARPATVVG 113
            ++ PP TCKLLVGHKADLPAYVVNDEALSLYVA ASGF+GWCLTVGSSEYGDYDVAARRGG   ATA  G R+KGQSLSGEKQLSVSEA+RTLLGH+FR+GG   GAS  RPA V+G
Sbjct:  114 KFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAH-GARHKGQSLSGEKQLSVSEAVRTLLGHVFRSGGAARGAS--RPAGVLG 227
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126631.1980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYW2_9PHAE3.120e-4780.34SH2 domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126631contigH-elongata_contig126631:120..1518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126631.1980.1mRNA_H-elongata_contig126631.1980.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126631 120..1518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126631.1980.1 ID=prot_H-elongata_contig126631.1980.1|Name=mRNA_H-elongata_contig126631.1980.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp
QYLPPGTCKLLVGHKADLPAYVVNDEALSLYVALASGFRGWCLTVGSSEY
GDYDVAARRGGATAEGGGRYKGQSLSGEKQLSVSEAMRTLLGHIFRTGGV
GGASGARPATVVGQA*
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